BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0230700 Os07g0230700|AK069953
(214 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0230700 Protein of unknown function DUF567 family protein 412 e-116
Os03g0816800 Protein of unknown function DUF567 family protein 163 7e-41
Os03g0816700 Protein of unknown function DUF567 family protein 110 9e-25
Os12g0120500 Protein of unknown function DUF567 family protein 72 3e-13
Os03g0179700 Protein of unknown function DUF567 family protein 69 2e-12
Os05g0311500 Protein of unknown function DUF567 family protein 66 2e-11
Os11g0120700 Protein of unknown function DUF567 family protein 65 3e-11
Os12g0120300 65 3e-11
>Os07g0230700 Protein of unknown function DUF567 family protein
Length = 214
Score = 412 bits (1060), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/198 (100%), Positives = 198/198 (100%)
Query: 17 GPTEPVVVVGPQYCAPYVVPLTVTKKSISLTDGDFTVTDANDNVVLNVKGTLFSVRHRRV 76
GPTEPVVVVGPQYCAPYVVPLTVTKKSISLTDGDFTVTDANDNVVLNVKGTLFSVRHRRV
Sbjct: 17 GPTEPVVVVGPQYCAPYVVPLTVTKKSISLTDGDFTVTDANDNVVLNVKGTLFSVRHRRV 76
Query: 77 LHDAVGQPLLSMQEKILSMHNRWEVYRGDSAHSCDKLFTVKKSSMLQLMKTEMDIFLAGN 136
LHDAVGQPLLSMQEKILSMHNRWEVYRGDSAHSCDKLFTVKKSSMLQLMKTEMDIFLAGN
Sbjct: 77 LHDAVGQPLLSMQEKILSMHNRWEVYRGDSAHSCDKLFTVKKSSMLQLMKTEMDIFLAGN 136
Query: 137 TAEQVCDFKIKGSYCDRSSAFYLGKSNTIIAQMNRKHTAASVVLGRDVFSITVFPQVDYV 196
TAEQVCDFKIKGSYCDRSSAFYLGKSNTIIAQMNRKHTAASVVLGRDVFSITVFPQVDYV
Sbjct: 137 TAEQVCDFKIKGSYCDRSSAFYLGKSNTIIAQMNRKHTAASVVLGRDVFSITVFPQVDYV 196
Query: 197 FIAALVAILDDVHRDRKE 214
FIAALVAILDDVHRDRKE
Sbjct: 197 FIAALVAILDDVHRDRKE 214
>Os03g0816800 Protein of unknown function DUF567 family protein
Length = 200
Score = 163 bits (413), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 128/190 (67%), Gaps = 3/190 (1%)
Query: 22 VVVVGPQYCAPYVVPLTVTKKSISLTDGDFTVTDA-NDNVVLNVKGTLFSVRHRRVLHDA 80
+ VV ++ A L+V K ++SL+ DFTVTDA VVL V G LFS+R R +L DA
Sbjct: 9 LAVVDARFVAGDAAALSVAK-TLSLSGSDFTVTDAATGAVVLRVDGVLFSLRRRCLLADA 67
Query: 81 VGQPLLSMQEKILSMHNRWEVYRGDSAHSCDKLFTVKKSSMLQLM-KTEMDIFLAGNTAE 139
+P+L++QE + M+ RW+V+RG+S D LFTV K S +QL T++ +FLA N AE
Sbjct: 68 DRRPVLTVQESAMVMNRRWKVFRGESTSRRDLLFTVVKPSAIQLWGSTKVSVFLASNDAE 127
Query: 140 QVCDFKIKGSYCDRSSAFYLGKSNTIIAQMNRKHTAASVVLGRDVFSITVFPQVDYVFIA 199
Q DF++ GSY D + A LG S+T+IA+++R+ + AS +LG++ +S+TV +DY FI
Sbjct: 128 QASDFRVTGSYHDGACAVSLGDSDTVIAKIDRRFSVASALLGKNAYSVTVNAGIDYAFIV 187
Query: 200 ALVAILDDVH 209
ALV +LD++H
Sbjct: 188 ALVVVLDEMH 197
>Os03g0816700 Protein of unknown function DUF567 family protein
Length = 236
Score = 110 bits (274), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 105/174 (60%), Gaps = 7/174 (4%)
Query: 42 KSISLTDGDFTVTDANDNVVLNVKGTLFSVRHRRVLHDAVGQPLLSMQEKILSMHNRWEV 101
+ I T+ DF VTDA VV+ ++G +FS+R R +L DA +P+L+M + M + W
Sbjct: 53 RVIGTTERDFAVTDAAGAVVMRLEGAVFSLRKRTLLLDAARRPVLTMTDSTYLMSSMWHA 112
Query: 102 YRGDSAHSCDKLFTVKKSSMLQLMKTEMDIFLAG-NTAEQVCDFKIKGSYCDRSSAFYLG 160
+RGDS LF+V K S++Q+ +T++ ++L G +A+QV DF I G+Y + + G
Sbjct: 113 FRGDSTSRRSVLFSVVKESVVQV-RTKIFVYLGGYRSADQVPDFVIGGNYYGGACTVFAG 171
Query: 161 KSNT----IIAQMNRKHTAASVV-LGRDVFSITVFPQVDYVFIAALVAILDDVH 209
S++ IAQ+ R + A ++V L R V++ + P +D FI +LV IL ++H
Sbjct: 172 NSDSDADAAIAQITRPNLAGTLVGLTRSVYTARINPGIDQAFILSLVVILHEMH 225
>Os12g0120500 Protein of unknown function DUF567 family protein
Length = 228
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 95/194 (48%), Gaps = 29/194 (14%)
Query: 38 TVTKKS---ISLTDGDFTVTDANDNVVLNVKGTLFSVRHRR-----VLHDAVGQPLLSMQ 89
TV K+S TDG F+V D ++ V +S R + +L D G PLL++
Sbjct: 29 TVWKRSSMGFQGTDG-FSVYDDAGSLAFRVDN--YSRRRKLFSGDLLLMDGHGSPLLALT 85
Query: 90 EKILSMHNRWEVYR------GDSAHSCDKLFTVKKSSMLQLMKTEMDIFLAGNT------ 137
+I+SMH++W YR G A S +LF+++K S++Q E ++ ++G T
Sbjct: 86 PQIISMHDQWNCYRASEEGQGKRARS-QQLFSMRKCSVMQ-SSHEAEVHMSGCTHASSDR 143
Query: 138 AEQVCDFKIKGSYCDRSSAFYLGKSNTIIAQMNRKHTAA---SVVLGRDVFSITVFPQVD 194
V F I+GS+ R S +A++ RK A S+ L DVFS+ V P VD
Sbjct: 144 TGHVPAFSIEGSF-KRRSCKIRNSGGEEVARITRKKAGAASLSLTLAEDVFSLEVQPNVD 202
Query: 195 YVFIAALVAILDDV 208
I A V +LD +
Sbjct: 203 CAMIMAFVIVLDRI 216
>Os03g0179700 Protein of unknown function DUF567 family protein
Length = 220
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 24 VVGPQYCAPYVVPLTVTKKSISLTDGDFTVTDANDNVVLNVKGT-LFSVRHRRVLHDAVG 82
VV +C+ L V ++ ++ G F VTD + VV +V G + + ++ D G
Sbjct: 28 VVSKIFCSSSQAVLMVRRRPPTVNGGGFVVTDRDQRVVFSVDGCGIIGASGQLIVRDGDG 87
Query: 83 QPLLSMQEK-----ILSMHNRWEVYRGDSAHSCDKLFTVKKSSMLQLMKTEMDIFLAGNT 137
+L + +K +LS++N W+ Y D +F+ + + M ++ + +
Sbjct: 88 TAILFIHKKGGVVQVLSINNWWKGYLMDYGEPSKLVFSFQDPKPVLCMNGDVRVAVEPKG 147
Query: 138 AEQVCDFKIKGSYCDRSSAFYLGKSNTIIAQMNRKHTAASVVLGRDVFSITVFPQVDYVF 197
++ D+++ GS+ R+ ++ ++AQ+ K A G+D + + V P D F
Sbjct: 148 RKRHWDYEVIGSFSQRACTVR-SRAGHVVAQIGVKGMLA----GKDFYHVVVQPGYDQAF 202
Query: 198 IAALVAILDDVHRD 211
+ ++AILD++H +
Sbjct: 203 VVGVIAILDNIHGE 216
>Os05g0311500 Protein of unknown function DUF567 family protein
Length = 215
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 23/195 (11%)
Query: 34 VVPLTVTKKSISLTDGDFTVTDANDNVVLNVKGTLFSVRHRRVLHDAVGQPLLSMQEKIL 93
V LTV ++S+ FTV D N+V V+ VL DA G+ LL+++ K L
Sbjct: 23 AVSLTVWRRSLLFNGKGFTVFDGKGNLVFRVESYAGGSPREVVLMDADGRALLTIRRKKL 82
Query: 94 SMHNRWEVYRGDSAHSC---DKLFTVKKSSMLQLMKTEMDIFLAGNTA------------ 138
S + W +Y GD+A K FT ++ L+ K+ + A ++
Sbjct: 83 SFADEWLIYDGDAASPAAPGPKRFTARRHVSLRPTKSLAHLSPARASSSAAAGGGSATAP 142
Query: 139 EQVCDFKIKGSYCDRSSAFYLGKSNTIIAQMNRKHTAA----SVVLGRDVFSITVFPQVD 194
C + ++GSY R + S A R+ AA +G DVF + V P +
Sbjct: 143 SGACRYDVEGSYAARCLDVFASAS----AGEQRRRVAAVCSKEAAVGPDVFRLVVEPGFE 198
Query: 195 YVFIAALVAILDDVH 209
A+V +LD +H
Sbjct: 199 PALAMAVVILLDQMH 213
>Os11g0120700 Protein of unknown function DUF567 family protein
Length = 372
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 34/183 (18%)
Query: 38 TVTKKS---ISLTDGDFTVTDANDNVVLNVKGTLFSVRHRR-----VLHDAVGQPLLSMQ 89
TV K+S TDG F+V D+ + V +S R + +L D G PLLS++
Sbjct: 32 TVWKRSSIGFQGTDG-FSVYDSAGKLAFRVDN--YSRRRKAFAGDLLLMDGHGTPLLSLR 88
Query: 90 EKILSMHNRWEVYRGDSAHSCD----------KLFTVKKSSMLQLMKTEMDIFLAGNTA- 138
+ILS+HNRW YR D ++F+++KSS LQ E ++F++ T+
Sbjct: 89 PQILSLHNRWNCYRAQEEEGLDSTSSPSVSQQQVFSMRKSSALQ-SSDEAEVFMSTRTSG 147
Query: 139 -EQVCD------FKIKGSYCDRSSAFYLGKSNTIIAQMNRKHT---AASVVLGRDVFSIT 188
Q+ D F+I G + RS G + A++ RK+ + V LG DVF++
Sbjct: 148 DSQLPDASPSPSFRIDGCFSMRSCKIR-GSNGEEAARITRKNAGVMSRPVSLGDDVFTLV 206
Query: 189 VFP 191
V P
Sbjct: 207 VRP 209
>Os12g0120300
Length = 265
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 33/182 (18%)
Query: 38 TVTKKS---ISLTDGDFTVTDANDNVVLNVKGTLFSVRHRR-----VLHDAVGQPLLSMQ 89
TV K+S TDG F+V D+ + V +S R + +L D G PLLS++
Sbjct: 32 TVWKRSSIGFQGTDG-FSVYDSAGKLAFRVDN--YSRRRKAFAGDLLLMDGHGTPLLSLR 88
Query: 90 EKILSMHNRWEVYRGDSAHSCD----------KLFTVKKSSMLQLMKTEMDIFLAGNT-- 137
+ILS+HNRW YR D ++F+++KSS LQ E ++F++ T
Sbjct: 89 PQILSLHNRWNCYRAQEEEGLDSTSSPSVSQQQVFSMRKSSALQ-SNDEAEVFMSTRTSG 147
Query: 138 -----AEQVCDFKIKGSYCDRSSAFYLGKSNTIIAQMNRKHT---AASVVLGRDVFSITV 189
A F+I G + RS G + A++ RK+ + V LG DVF++ V
Sbjct: 148 DSQPDASPSPSFRIDGCFSMRSCKIR-GSNGEEAARITRKNAGVMSRPVSLGDDVFTLVV 206
Query: 190 FP 191
P
Sbjct: 207 RP 208
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,973,564
Number of extensions: 206430
Number of successful extensions: 380
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 380
Number of HSP's successfully gapped: 8
Length of query: 214
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 117
Effective length of database: 11,971,043
Effective search space: 1400612031
Effective search space used: 1400612031
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 154 (63.9 bits)