Os03g0816700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF567 family protein.
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Os03g0816700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF567 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.98 | 0.376 | 2.94 | -0.053 | 0.0277 | 1.68 | -0.281 | -6.06 | 0.118 | 21.2 | 93.89 | 285 | 13.2 | -- |
| 78.22 | 0.412 | 2.91 | -0.129 | 0.0186 | 2.25 | -0.528 | -- | 0.137 | 22 | 94.84 | 199 | 12.8 | -- |
| 63.87 | 0.372 | 2.94 | -0.0465 | 0.024 | 1.82 | -- | -6.49 | 0.108 | 17.1 | 93.87 | 276 | 13.4 | -- |
| 79.29 | 0.415 | 2.91 | -0.111 | 0.0201 | 2.25 | -- | -- | 0.109 | 17.3 | 94.85 | 199 | 12.8 | -- |
| 63.77 | 0.372 | 2.95 | -0.0659 | -- | 1.88 | -- | -6.53 | 0.106 | -- | 93.89 | 264 | 13.4 | -- |
| 92.07 | 0.45 | 2.94 | -0.127 | 0.106 | -- | -0.763 | -- | 0.0376 | 2.34 | -- | -- | -- | -- |
| 94.21 | 0.455 | 2.94 | -0.106 | 0.105 | -- | -- | -- | 0.0421 | 2.4 | -- | -- | -- | -- |
| 79.29 | 0.415 | 2.92 | -0.107 | -- | 2.29 | -- | -- | 0.105 | -- | 94.86 | 199 | 12.9 | -- |
| 79.58 | 0.415 | 2.92 | -- | 0.0353 | 2.27 | -- | -- | 0.109 | 18.1 | 94.86 | 199 | 12.8 | -- |
| 94.85 | 0.455 | 2.93 | -0.102 | -- | -- | -- | -- | 0.0447 | -- | -- | -- | -- | -- |
| 94.5 | 0.455 | 2.93 | -- | 0.103 | -- | -- | -- | 0.054 | 2.38 | -- | -- | -- | -- |
| 79.61 | 0.416 | 2.92 | -- | -- | 2.3 | -- | -- | 0.111 | -- | 94.87 | 199 | 12.8 | -- |
| 95.13 | 0.455 | 2.93 | -- | -- | -- | -- | -- | 0.056 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.03 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 2 | 78.11 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 3 | 78.11 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 4 | 78.22 | wind | 1.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 6 | 79.36 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 12 | 3 |
| 8 | 79.36 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 9 | 79.36 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 3 |
| 11 | 79.36 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 18 | 79.65 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 19 | 79.66 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 21 | 79.70 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 42 | 79.94 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 74 | 80.88 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 83 | 81.24 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 6 |
| 93 | 81.86 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 96 | 81.98 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 11 | 15 |
| 97 | 82.01 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 107 | 82.01 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 139 | 82.40 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 15 |
| 143 | 82.42 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 15 |
| 165 | 82.78 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 1 | 2 |
| 172 | 82.90 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 4 |
| 189 | 83.03 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 13 |
| 206 | 83.36 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 217 | 83.49 | humidity | 90.0 | 270 | > th | dose dependent | sin | 17 | NA |
| 224 | 83.59 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 1 |
| 231 | 83.59 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 1 |
| 241 | 83.61 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 13 |
| 291 | 84.21 | wind | 7.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 330 | 84.54 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 332 | 84.54 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 334 | 84.54 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 385 | 84.54 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 387 | 84.54 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 389 | 84.54 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 448 | 84.61 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 4 |
| 466 | 84.73 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 19 |
| 476 | 84.81 | wind | 1.0 | 90 | < th | dose independent | rect. | 17 | 9 |
| 503 | 84.93 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 514 | 84.93 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 535 | 84.98 | wind | 1.0 | 90 | < th | dose independent | rect. | 13 | 13 |
| 543 | 85.03 | precipitation | 0.1 | 30 | > th | dose independent | sin | 1 | NA |
| 555 | 85.08 | precipitation | 0.1 | 30 | < th | dose independent | sin | 1 | NA |
| 556 | 85.08 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 17 |
| 557 | 85.08 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 1 | NA |
| 558 | 85.08 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 1 | NA |
| 570 | 85.10 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 594 | 85.19 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 604 | 85.21 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 19 | 5 |
| 645 | 85.22 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 678 | 85.27 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 690 | 85.32 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 723 | 85.35 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 19 | 10 |
| 735 | 85.36 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 22 | 6 |
| 773 | 85.39 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 3 |
| 789 | 85.43 | radiation | 1.0 | 720 | > th | dose independent | sin | 19 | NA |
| 800 | 85.45 | radiation | 1.0 | 720 | < th | dose independent | sin | 19 | NA |
| 801 | 85.45 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 861 | 85.55 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 22 | 10 |
| 870 | 85.56 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 22 | 7 |
| 912 | 85.61 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 919 | 85.62 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 931 | 85.64 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 12 |
| 957 | 85.68 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 972 | 85.71 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 975 | 85.71 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 22 | 7 |
| 989 | 85.72 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 11 | 17 |