FiT-DB / Search/ Help/ Sample detail

Os07g0230700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF567 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0214) R2 : 0.451
β1 : 1.12 (0.0782) R2dD : 0.255 R2D : 0.0609
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.71 (0.0456) R2dN8 : 0.39 R2N8 : 0.197
σ : 0.401
deviance : 73.61
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
49.12 0.329 11.1 0.414 0.465 0.0442 -0.805 -4.37 0.514 7.97 4.516 497 -- --
60.53 0.365 11 1.14 0.485 -0.122 0.017 -- 0.72 8.18 -21.35 1053 -- --
50.44 0.331 11.1 0.492 0.466 0.0424 -- -3.88 0.54 8.01 4.167 401 -- --
60.51 0.362 11 1.06 0.487 0.103 -- -- 0.686 7.97 -12.87 4983 -- --
60.16 0.361 11.1 0.579 -- -0.339 -- -3.87 0.601 -- 14.1 418 -- --
60.67 0.365 11 1.11 0.488 -- 0.0486 -- 0.703 7.9 -- -- -- --
60.68 0.365 11 1.11 0.487 -- -- -- 0.703 7.91 -- -- -- --
70.52 0.391 11 1.22 -- -0.449 -- -- 0.774 -- 12.11 498 -- --
71.45 0.394 11.1 -- 0.486 0.78 -- -- 0.353 8.1 0.2155 44795 -- --
73.61 0.401 11 1.12 -- -- -- -- 0.71 -- -- -- -- --
93.27 0.452 11 -- 0.496 -- -- -- 0.579 7.75 -- -- -- --
84.66 0.429 11.1 -- -- 0.76 -- -- 0.363 -- 0.1367 44676 -- --
106.54 0.482 11.1 -- -- -- -- -- 0.586 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.77 temperature 20.0 720 > th dose dependent rect. 19 18
5 48.09 wind 1.0 43200 > th dose independent rect. 21 1
10 48.31 temperature 20.0 720 > th dose dependent sin 8 NA
12 48.33 wind 1.0 14400 < th dose dependent rect. 19 7
15 48.42 radiation 1.0 14400 > th dose independent rect. 18 1
30 48.57 radiation 1.0 43200 < th dose dependent rect. 19 10
33 48.60 radiation 1.0 43200 < th dose dependent rect. 23 6
40 48.66 radiation 1.0 43200 < th dose dependent rect. 3 2
43 48.68 wind 1.0 14400 < th dose dependent rect. 20 5
48 48.73 wind 1.0 43200 < th dose independent rect. 21 1
51 48.76 wind 1.0 43200 < th dose dependent rect. 19 3
58 48.90 precipitation 0.1 43200 < th dose independent rect. 10 3
59 48.90 precipitation 0.1 43200 < th dose dependent rect. 10 3
65 48.96 wind 1.0 43200 < th dose independent rect. 19 3
66 48.96 temperature 10.0 720 > th dose dependent rect. 17 22
67 48.97 precipitation 0.1 43200 < th dose independent rect. 12 1
68 48.97 precipitation 0.1 43200 < th dose dependent rect. 12 1
71 48.99 wind 7.0 43200 < th dose independent rect. 21 1
76 49.03 wind 7.0 43200 > th dose dependent rect. 21 1
79 49.05 temperature 10.0 720 > th dose dependent rect. 17 20
82 49.06 wind 7.0 43200 > th dose independent rect. 21 1
83 49.06 precipitation 0.1 43200 > th dose independent rect. 10 3
84 49.06 precipitation 0.1 43200 > th dose dependent rect. 10 3
90 49.10 precipitation 0.1 43200 > th dose dependent rect. 21 1
91 49.11 precipitation 0.1 43200 > th dose independent rect. 21 1
92 49.11 precipitation 0.1 43200 < th dose independent rect. 21 1
94 49.11 precipitation 0.1 43200 < th dose dependent rect. 21 1
98 49.13 wind 1.0 14400 < th dose dependent rect. 22 3
161 49.38 humidity 90.0 14400 > th dose dependent rect. 4 2
166 49.39 temperature 30.0 720 < th dose dependent rect. 15 19
172 49.41 precipitation 0.1 43200 > th dose dependent rect. 21 4
187 49.46 radiation 10.0 43200 > th dose independent rect. 8 2
201 49.50 wind 1.0 43200 < th dose dependent rect. 6 1
220 49.55 precipitation 0.1 43200 < th dose independent rect. 20 5
222 49.55 precipitation 0.1 43200 < th dose dependent rect. 20 5
224 49.56 precipitation 0.1 43200 > th dose independent rect. 20 5
229 49.57 humidity 90.0 43200 > th dose independent rect. 12 1
231 49.57 radiation 1.0 14400 < th dose independent rect. 18 8
232 49.57 radiation 1.0 14400 < th dose independent rect. 18 10
238 49.59 radiation 1.0 14400 < th dose independent rect. 18 2
246 49.60 wind 1.0 43200 > th dose independent rect. 19 3
247 49.60 radiation 10.0 43200 > th dose independent rect. 7 4
250 49.60 temperature 20.0 1440 > th dose dependent rect. 17 5
251 49.60 temperature 10.0 720 > th dose dependent rect. 1 22
255 49.61 temperature 20.0 1440 > th dose dependent rect. 18 3
260 49.62 atmosphere 995.0 43200 > th dose independent rect. 19 3
262 49.62 atmosphere 995.0 43200 < th dose dependent rect. 18 5
263 49.63 wind 1.0 43200 > th dose independent rect. 16 10
267 49.65 humidity 90.0 43200 > th dose dependent rect. 12 1
275 49.66 precipitation 0.1 43200 < th dose independent rect. 18 5
277 49.66 precipitation 0.1 43200 < th dose dependent rect. 18 5
285 49.67 precipitation 0.1 43200 > th dose independent rect. 18 5
295 49.69 wind 1.0 43200 < th dose dependent rect. 13 12
300 49.70 atmosphere 995.0 43200 > th dose independent rect. 23 1
305 49.71 atmosphere 995.0 43200 > th dose independent rect. 19 5
316 49.73 atmosphere 995.0 43200 < th dose independent rect. 21 1
333 49.73 wind 1.0 43200 < th dose independent rect. 16 9
343 49.73 atmosphere 995.0 43200 < th dose dependent rect. 21 1
361 49.74 wind 1.0 14400 < th dose independent rect. 19 7
365 49.75 wind 1.0 43200 < th dose independent rect. 5 2
368 49.75 precipitation 0.1 43200 < th dose independent rect. 18 7
369 49.75 radiation 20.0 43200 < th dose dependent rect. 10 1
371 49.75 precipitation 0.1 43200 < th dose dependent rect. 18 7
381 49.77 precipitation 0.1 43200 > th dose independent rect. 24 1
385 49.77 precipitation 0.1 43200 > th dose dependent rect. 24 1
390 49.78 wind 1.0 43200 < th dose independent rect. 19 1
393 49.78 precipitation 0.1 43200 > th dose independent rect. 18 7
397 49.79 precipitation 0.1 43200 < th dose independent rect. 24 1
403 49.79 precipitation 0.1 43200 < th dose dependent rect. 24 1
430 49.83 atmosphere 995.0 43200 < th dose independent rect. 18 8
436 49.84 wind 1.0 43200 > th dose independent rect. 19 1
439 49.84 wind 1.0 43200 < th dose dependent rect. 11 14
447 49.86 atmosphere 995.0 43200 > th dose independent rect. 18 20
462 49.88 atmosphere 995.0 43200 < th dose independent rect. 18 19
475 49.90 wind 1.0 43200 < th dose independent rect. 2 6
483 49.91 radiation 1.0 43200 < th dose independent rect. 13 1
485 49.91 atmosphere 995.0 43200 > th dose independent rect. 18 9
487 49.91 wind 1.0 43200 < th dose independent rect. 14 11
490 49.91 radiation 1.0 43200 < th dose dependent rect. 13 1
504 49.93 radiation 1.0 43200 > th dose independent rect. 13 1
520 49.94 wind 5.0 43200 > th dose dependent rect. 21 7
528 49.95 temperature 10.0 720 > th dose dependent no NA NA
565 49.99 precipitation 0.1 43200 > th dose independent rect. 14 9
577 50.00 precipitation 0.1 43200 > th dose independent rect. 14 11
578 50.00 temperature 20.0 1440 > th dose dependent sin 16 NA
584 50.01 atmosphere 995.0 43200 > th dose independent sin 7 NA
585 50.01 wind 1.0 43200 > th dose independent rect. 21 4
606 50.02 precipitation 0.1 43200 < th dose independent rect. 14 11
607 50.02 precipitation 0.1 43200 > th dose independent rect. 11 12
612 50.02 precipitation 0.1 43200 < th dose dependent rect. 14 11
616 50.03 atmosphere 995.0 43200 < th dose independent sin 6 NA
618 50.03 precipitation 0.1 43200 < th dose independent rect. 14 9
621 50.03 precipitation 0.1 43200 < th dose independent rect. 11 12
622 50.03 radiation 1.0 14400 < th dose dependent rect. 18 1
627 50.03 precipitation 0.1 43200 < th dose dependent rect. 14 9
629 50.03 precipitation 0.1 43200 < th dose dependent rect. 11 12
630 50.03 atmosphere 995.0 43200 < th dose dependent rect. 16 18
633 50.03 temperature 20.0 1440 > th dose dependent rect. 9 23
634 50.03 temperature 20.0 1440 > th dose dependent rect. 11 23
637 50.04 atmosphere 995.0 43200 > th dose independent sin 9 NA
639 50.04 atmosphere 995.0 43200 < th dose independent sin 10 NA
653 50.04 humidity 90.0 14400 > th dose dependent rect. 22 8
678 50.05 atmosphere 995.0 43200 < th dose independent rect. 21 18
681 50.05 atmosphere 995.0 43200 < th dose dependent sin 13 NA
706 50.06 precipitation 0.1 43200 > th dose independent rect. 11 14
707 50.06 precipitation 0.1 43200 < th dose independent rect. 11 14
714 50.06 precipitation 0.1 43200 < th dose dependent rect. 11 14
735 50.07 atmosphere 995.0 43200 < th dose independent rect. 21 15
824 50.09 temperature 30.0 720 < th dose dependent rect. 7 23
854 50.11 wind 1.0 43200 > th dose independent rect. 14 11
869 50.11 temperature 10.0 270 > th dose dependent rect. 8 23
901 50.13 temperature 30.0 720 < th dose dependent sin 11 NA
915 50.13 temperature 30.0 720 < th dose dependent rect. 5 22
917 50.14 wind 1.0 43200 > th dose independent rect. 10 1
918 50.14 wind 1.0 43200 > th dose independent rect. 23 2
988 50.17 radiation 40.0 43200 < th dose independent rect. 16 6