Os11g0120700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF567 family protein.
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Os11g0120700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF567 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.93 | 0.311 | 10.5 | 1.14 | 1.17 | 0.943 | -0.467 | -1.77 | 0.187 | 6.15 | 25.8 | 10023 | -- | -- |
| 45.26 | 0.313 | 10.4 | 1.33 | 1.15 | 1.05 | -0.435 | -- | 0.256 | 6.2 | 24.7 | 24184 | -- | -- |
| 44.4 | 0.31 | 10.5 | 1.14 | 1.16 | 0.937 | -- | -1.78 | 0.19 | 6.14 | 25.9 | 10067 | -- | -- |
| 45.76 | 0.315 | 10.4 | 1.33 | 1.15 | 1.05 | -- | -- | 0.256 | 6.2 | 24.7 | 24184 | -- | -- |
| 113.9 | 0.497 | 10.5 | 1.2 | -- | 0.96 | -- | -1.66 | 0.242 | -- | 25.51 | 10047 | -- | -- |
| 72.72 | 0.4 | 10.4 | 2.2 | 1.19 | -- | -0.397 | -- | 0.702 | 5.94 | -- | -- | -- | -- |
| 73.11 | 0.4 | 10.4 | 2.19 | 1.19 | -- | -- | -- | 0.703 | 5.93 | -- | -- | -- | -- |
| 115.07 | 0.5 | 10.5 | 1.21 | -- | 1.15 | -- | -- | 0.232 | -- | 24.08 | 25797 | -- | -- |
| 48.18 | 0.323 | 10.5 | -- | 1.18 | 1.88 | -- | -- | -0.0754 | 6.05 | 19.82 | 47520 | -- | -- |
| 146.19 | 0.565 | 10.4 | 2.23 | -- | -- | -- | -- | 0.731 | -- | -- | -- | -- | -- |
| 199.93 | 0.661 | 10.4 | -- | 1.22 | -- | -- | -- | 0.459 | 5.84 | -- | -- | -- | -- |
| 119.76 | 0.51 | 10.6 | -- | -- | 1.91 | -- | -- | -0.0675 | -- | 19.97 | 47520 | -- | -- |
| 277.25 | 0.777 | 10.4 | -- | -- | -- | -- | -- | 0.483 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.45 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 11 | 43.35 | temperature | 20 | 14400 | < th | dose dependent | rect. | 12 | 15 |
| 13 | 43.40 | temperature | 15 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 16 | 43.43 | temperature | 15 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 28 | 43.58 | temperature | 20 | 14400 | < th | dose dependent | sin | 16 | NA |
| 55 | 43.86 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 3 |
| 88 | 44.13 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 93 | 44.14 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 131 | 44.32 | temperature | 20 | 14400 | < th | dose dependent | no | NA | NA |
| 133 | 44.32 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 23 |
| 140 | 44.34 | temperature | 20 | 14400 | < th | dose dependent | rect. | 17 | 23 |
| 142 | 44.35 | humidity | 90 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 180 | 44.43 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 185 | 44.44 | temperature | 20 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 191 | 44.45 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 234 | 44.54 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 3 |
| 258 | 44.61 | temperature | 20 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 285 | 44.70 | radiation | 1 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 286 | 44.70 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 299 | 44.72 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 13 |
| 306 | 44.74 | radiation | 1 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 321 | 44.77 | temperature | 25 | 14400 | > th | dose independent | rect. | 2 | 11 |
| 327 | 44.78 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 359 | 44.86 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 387 | 44.91 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 397 | 44.92 | temperature | 25 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 402 | 44.93 | temperature | 25 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 435 | 44.98 | temperature | 20 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 442 | 44.98 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 481 | 45.05 | temperature | 20 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 483 | 45.05 | temperature | 25 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 585 | 45.16 | humidity | 90 | 43200 | > th | dose dependent | sin | 15 | NA |
| 678 | 45.25 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 15 |
| 752 | 45.31 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 784 | 45.33 | temperature | 20 | 43200 | < th | dose independent | rect. | 7 | 16 |
| 817 | 45.36 | temperature | 20 | 43200 | < th | dose independent | rect. | 10 | 13 |
| 844 | 45.38 | temperature | 20 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 859 | 45.39 | temperature | 20 | 14400 | < th | dose dependent | sin | 2 | NA |
| 923 | 45.44 | temperature | 25 | 14400 | > th | dose independent | sin | 5 | NA |
| 932 | 45.45 | temperature | 20 | 14400 | < th | dose independent | sin | 7 | NA |
| 979 | 45.48 | temperature | 20 | 43200 | > th | dose independent | rect. | 7 | 16 |
| 998 | 45.49 | temperature | 20 | 14400 | < th | dose independent | rect. | 23 | 20 |