BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0120700 Os11g0120700|Os11g0120700
(372 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38640.1 | chr2:16157725-16158474 REVERSE LENGTH=197 79 4e-15
AT3G15810.1 | chr3:5348054-5349178 REVERSE LENGTH=221 73 3e-13
AT5G41590.1 | chr5:16632221-16633896 REVERSE LENGTH=222 70 2e-12
AT1G80120.1 | chr1:30139198-30139986 FORWARD LENGTH=211 67 2e-11
AT3G14260.1 | chr3:4747986-4748779 REVERSE LENGTH=231 64 1e-10
AT5G01750.2 | chr5:290034-291109 FORWARD LENGTH=218 60 2e-09
AT1G63410.1 | chr1:23510075-23511997 REVERSE LENGTH=209 59 4e-09
AT1G33840.1 | chr1:12283862-12285306 REVERSE LENGTH=231 58 1e-08
AT1G53900.1 | chr1:20127634-20130834 FORWARD LENGTH=581 56 4e-08
AT1G53880.1 | chr1:20115069-20118269 FORWARD LENGTH=581 56 4e-08
AT1G53870.1 | chr1:20112295-20113057 FORWARD LENGTH=218 54 1e-07
>AT2G38640.1 | chr2:16157725-16158474 REVERSE LENGTH=197
Length = 196
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 90/181 (49%), Gaps = 32/181 (17%)
Query: 29 VVYTVWKRSSIGFQGTDGFSVYDSAGKLAFRVDNYSRRRKAFAGDLLLMDGHGTPLLSLR 88
VV TVWK+S + DGF+VY++ G+L FRVDNY + +++LMD G PLLS+R
Sbjct: 23 VVLTVWKKSLLF--NCDGFTVYNANGELVFRVDNYMNCPR---DNIVLMDASGFPLLSIR 77
Query: 89 PQILSLHNRWNCYRAQEEEGLDXXXXXXXXXXXXXXMRKSSALQSSDEAEVFMSTRTSGD 148
+ LSL + W Y + E RK+ ++ S+ ++ ++S
Sbjct: 78 RKKLSLGDCWMVYDGETERD------------PIFTARKNVSIISNRKSLAWVS------ 119
Query: 149 SQLPDASPSPSFRIDGCFSMRSCKIRGS--NGEEAARITRKNAGVMSRPVSLGDDVFTLV 206
A + + I+G + RSCKI N ++ A I RK + V+ G DV+ L+
Sbjct: 120 -----AKKTVLYEIEGSYGQRSCKILDERRNKKKTAEIKRKETVIGG--VAFGKDVYKLI 172
Query: 207 V 207
V
Sbjct: 173 V 173
>AT3G15810.1 | chr3:5348054-5349178 REVERSE LENGTH=221
Length = 220
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 26 DQPVVYTVWKRSSIGFQGTDGFSVYDSAGKLAFRVDNYSRRRKAFAGDLLLMDGHGTPLL 85
D+P+ TV K S F DGF+ YD G + FRVD+Y + +++LMD G LL
Sbjct: 30 DKPL--TVCKTSL--FYTGDGFAAYDCRGDIIFRVDSYGPDTRD-NDEIVLMDATGKCLL 84
Query: 86 SLRPQILSLHNRWNCYRAQEEEGLDXXXXXXXXXXXXXXMRKSSAL-QSSDEAEVFMSTR 144
+++ + +LH RW + + EG +R+SS + + + E EV+ T
Sbjct: 85 TVKRKRPTLHQRWEGFLGERSEG----------QKPIFSVRRSSIIGRCTMEVEVYDGT- 133
Query: 145 TSGDSQLPDASPSPSFRIDGCFSMRSCKIRGSNGEEAARITRKNAGVMSRPVSLGDDVFT 204
+ IDG FS RSC I + A I RK S V LG DVFT
Sbjct: 134 ------------GEEYIIDGDFSQRSCLIYDTKKCTVAEIKRKVDA--STNVMLGRDVFT 179
Query: 205 LVVRPG 210
L ++PG
Sbjct: 180 LEIKPG 185
>AT5G41590.1 | chr5:16632221-16633896 REVERSE LENGTH=222
Length = 221
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 32 TVWKRSSIGFQGTDGFSVYDSAGKLAFRVDNYSRRRKAFAGDLLLMDGHGTPLLSL-RPQ 90
TVW++S + +GF+V DS G L +RVDNY+R R +L+LMD G LL + R +
Sbjct: 40 TVWRKSLL--VSCEGFTVIDSNGDLIYRVDNYARTRPE---ELILMDKDGNSLLLMHRTK 94
Query: 91 ILSLHNRWNCYRAQEEEGLDXXXXXXXXXXXXXXMRKSSALQSSDEAEVFMSTRTSGDSQ 150
++L + W Y A + +G MRK+ + ++ SG
Sbjct: 95 KITLVDSWGIYEANDTKG-----ETKIPKCPTWYMRKNLKMNILSTKSDILAYVYSGSFD 149
Query: 151 LPDASPSPSFRIDGCFSMRSCKI-RGSNGEEAARITRKNAGVMSRPVSLGDDVFTLVVRP 209
+ S+ I G + +SCKI + I RK V ++ V G DVF LVV P
Sbjct: 150 KKN-----SYIIKGSYRCKSCKIVHVPLNKTVVEIKRKE--VRTKGVRFGSDVFDLVVNP 202
Query: 210 G 210
G
Sbjct: 203 G 203
>AT1G80120.1 | chr1:30139198-30139986 FORWARD LENGTH=211
Length = 210
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 87/178 (48%), Gaps = 27/178 (15%)
Query: 35 KRSSIGFQGTDGFSVYDSAGKLAFRVDNYSRRRKAFAGDLLLMDGHGTPLLSLRPQILSL 94
+++S+ F G DGF+VYD G L FRVD+Y +++LMD HG LL+LR + SL
Sbjct: 22 RKTSLFFAG-DGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLRRKRPSL 80
Query: 95 HNRWNCYRAQEEEGLDXXXXXXXXXXXXXXMRKSSAL-QSSDEAEVFMSTRTSGDSQLPD 153
RW Y + +G +R+SS + ++S EV+ GD Q +
Sbjct: 81 RRRWEGYLGERSDG----------QKPIFGVRRSSIIGRNSVTVEVY------GDYQCSE 124
Query: 154 ASPSPSFRIDGCFSMRSCK-IRGSNGEEAARITRKNAGVMSRPVSLGDDVFTLVVRPG 210
+ I+G F R+C + + A I RK S V LG DVF+L V+PG
Sbjct: 125 ------YLIEGSFGARNCTVVEAETRRKVAEIRRKVDA--STNVMLGKDVFSLNVKPG 174
>AT3G14260.1 | chr3:4747986-4748779 REVERSE LENGTH=231
Length = 230
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 48/219 (21%)
Query: 4 IQIHPSHXXXXXXXXXXXXXXXDQPVVYTVWKRSSIGFQGTDGFSVYDSAGKLAFRVDNY 63
++IHP + +T+W +S + T+G +V+DS G + +RVDNY
Sbjct: 24 VKIHPDLTTSGAGEETSSPYLTTEQESFTIWMKSLVF--NTNGCTVFDSKGNIIYRVDNY 81
Query: 64 SRRRKAFAGDLLLMDGHGTPLLSLRPQILSLHNRWNCYRAQEEEGLDXXXXXXXXXXXXX 123
+ + ++ LMD G L +LR Q L W YR+
Sbjct: 82 NSKS---CREVYLMDLSGHVLFTLRRQKFGLFKTWEGYRSS------------------- 119
Query: 124 XMRKSSALQSSDEAEVFMSTRTSGDS-QLPDASPSPSFRIDG---------CFSM----R 169
S+ ++S+ + E F R + Q+P+ S S+R++ C+ M
Sbjct: 120 ----SATVESTTKLEYF---RVKNNVFQVPNKDSSSSYRVNAGSCRNDEQYCYKMVTRGS 172
Query: 170 SCKIRGSNGEEAARITRKNAGVMSRPVSLGDDVFTLVVR 208
S I + G+ A + RK + + LGDDV T++V
Sbjct: 173 SLAIEDNCGKLLAEVKRKQS---INGLKLGDDVLTMMVE 208
>AT5G01750.2 | chr5:290034-291109 FORWARD LENGTH=218
Length = 217
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 28/169 (16%)
Query: 44 TDG-FSVYDSAGKLAFRVDNYSRRRKAFA--GDLLLMDGHGTPLLSLRPQILSLHNRWNC 100
TDG F + D G L F+V + F +L+DG GTP+++LR +++S+H+RW
Sbjct: 50 TDGNFVITDVNGNLLFKV-----KEPVFGLHDKRVLLDGSGTPVVTLREKMVSMHDRWQV 104
Query: 101 YRAQEEEGLDXXXXXXXXXXXXXXMRKSSALQSSDEAEVFMSTRTSGDSQLPDASPSPSF 160
+R + D +++SS LQ + +VF+ + D + D F
Sbjct: 105 FRGGSTDQRD----------LLYTVKRSSMLQLKTKLDVFLG--HNKDEKRCD------F 146
Query: 161 RIDGCFSMRSCKIRGSNGEEAARITRKNAGVMSRPVSLGDDVFTLVVRP 209
R+ G + RSC + GE A + + + + V LG D F++ V P
Sbjct: 147 RVKGSWLERSCVVYA--GESDAIVAQMHRKHTVQSVFLGKDNFSVTVYP 193
>AT1G63410.1 | chr1:23510075-23511997 REVERSE LENGTH=209
Length = 208
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 42/185 (22%)
Query: 31 YTVWKRSSIGFQGTDGFSVYDSAGKLAFRVDNYSRRRKAFAGDLLLMDGHGTPLLSLRPQ 90
+TVW +S + +Q T+G +VY+S G++ +RV+NY + + ++ +MD HG L ++R +
Sbjct: 22 FTVWMKSLV-YQ-TNGLTVYNSNGEITYRVENYDK----CSNEVHIMDLHGNILFTIRKK 75
Query: 91 ILSLHNRWNCYRAQEEEGLDXXXXXXXXXXXXXXMRKSSALQSSDE----AEVFMSTRTS 146
L L W Y R+ + S++E A + S+
Sbjct: 76 KLWLFGSWYVY------------------------RECGSFTSTEEVKPCARIKRSSIRD 111
Query: 147 GDSQLPDASPSPSF--RIDGCFSMRSCKIRGSNGEEAARITRKNAGVMSRPVSLGDDVFT 204
GD ++ D + + R D F+ + I G+ A++ K + S ++LG+DV T
Sbjct: 112 GDWEVRDETNEVFWILRFDPKFAFQIIDIHGNI---IAQVKPKQS---SNGITLGEDVLT 165
Query: 205 LVVRP 209
L V+P
Sbjct: 166 LEVKP 170
>AT1G33840.1 | chr1:12283862-12285306 REVERSE LENGTH=231
Length = 230
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 28/169 (16%)
Query: 44 TDG-FSVYDSAGKLAFRVDN--YSRRRKAFAGDLLLMDGHGTPLLSLRPQILSLHNRWNC 100
TDG F + ++ G L F+V + +S K +LMDG GT +L+L+ +I+++H+RW
Sbjct: 50 TDGNFVITNAEGNLLFKVKDPFFSLHEKR-----ILMDGFGTKVLTLKGKIMTMHDRWLV 104
Query: 101 YRAQEEEGLDXXXXXXXXXXXXXXMRKSSALQSSDEAEVFMSTRTSGDSQLPDASPSPSF 160
+R E +D +++S+ +Q + + +VF++ +
Sbjct: 105 FRGGSTEEVD----------LLYTVKRSNMVQITTKLDVFLADNIE--------QKKCDY 146
Query: 161 RIDGCFSMRSCKIRGSNGEEAARITRKNAGVMSRPVSLGDDVFTLVVRP 209
R++G + SC + + + R+ + S V G D F L V P
Sbjct: 147 RLEGVWLETSCFVYAGDSDIILAQMREKKTMQS--VLFGKDNFCLTVNP 193
>AT1G53900.1 | chr1:20127634-20130834 FORWARD LENGTH=581
Length = 580
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 43/187 (22%)
Query: 31 YTVWKRSSIGFQGTDGFSVYDSAGKLAFRVDNYSRRRKAFAGDLLLMDGHGTPLLSLRPQ 90
+T+W RS + F + G +V+DS G L +RVDNY+ + ++ LMD +G L +LR +
Sbjct: 32 FTIWMRSLV-FH-SKGCTVFDSKGNLIYRVDNYNSKS---CSEVYLMDLYGKILFTLRQK 86
Query: 91 ILSLHNRWNCYRAQEEEGLDXXXXXXXXXXXXXXMRKSSALQ---SSDEAEVFMSTR-TS 146
L L W Y + +RK+ + SS +V M +R
Sbjct: 87 KLGLFKSWKGYNS---------------TGTRFQLRKNFKILPKGSSSSYKVVMGSRIVD 131
Query: 147 GDSQLPDASPSPSFRIDGCFSMRSCK----IRGSNGEEAARITRKNAGVMSRPVSLGDDV 202
GD Q C+ + K I +G A + +K + + S + LG DV
Sbjct: 132 GDHQ-------------SCYKIVKRKSVFTIEDGSGRLLAEVKKKQSNIKS--LDLGKDV 176
Query: 203 FTLVVRP 209
T++V P
Sbjct: 177 LTMMVEP 183
>AT1G53880.1 | chr1:20115069-20118269 FORWARD LENGTH=581
Length = 580
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 43/187 (22%)
Query: 31 YTVWKRSSIGFQGTDGFSVYDSAGKLAFRVDNYSRRRKAFAGDLLLMDGHGTPLLSLRPQ 90
+T+W RS + F + G +V+DS G L +RVDNY+ + ++ LMD +G L +LR +
Sbjct: 32 FTIWMRSLV-FH-SKGCTVFDSKGNLIYRVDNYNSKS---CSEVYLMDLYGKILFTLRQK 86
Query: 91 ILSLHNRWNCYRAQEEEGLDXXXXXXXXXXXXXXMRKSSALQ---SSDEAEVFMSTR-TS 146
L L W Y + +RK+ + SS +V M +R
Sbjct: 87 KLGLFKSWKGYNS---------------TGTRFQLRKNFKILPKGSSSSYKVVMGSRIVD 131
Query: 147 GDSQLPDASPSPSFRIDGCFSMRSCK----IRGSNGEEAARITRKNAGVMSRPVSLGDDV 202
GD Q C+ + K I +G A + +K + + S + LG DV
Sbjct: 132 GDHQ-------------SCYKIVKRKSVFTIEDGSGRLLAEVKKKQSNIKS--LDLGKDV 176
Query: 203 FTLVVRP 209
T++V P
Sbjct: 177 LTMMVEP 183
>AT1G53870.1 | chr1:20112295-20113057 FORWARD LENGTH=218
Length = 217
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 42/187 (22%)
Query: 31 YTVWKRSSIGFQGTDGFSVYDSAGKLAFRVDNYSRRRKAFAGDLLLMDGHGTPLLSLRPQ 90
+T+W +S + + G +V+DS G L +RVDNY K+++ ++ MD +G L +LR +
Sbjct: 44 FTIWMKSLVF--NSKGCTVFDSKGNLIYRVDNYD--SKSWSNEVYFMDLNGKILFTLRQK 99
Query: 91 ILSLHNRWNCYRAQEEEGLDXXXXXXXXXXXXXXMRKSSAL---QSSDEAEVFMSTR-TS 146
L W Y + +RK + +SS +V M +R
Sbjct: 100 KLGFFKSWEGYNSTGTR---------------FRLRKIFKILPRESSSSYKVVMGSRIVD 144
Query: 147 GDSQLPDASPSPSFRIDGCFSMRS----CKIRGSNGEEAARITRKNAGVMSRPVSLGDDV 202
GD Q C+ + + I+ +G A + K + + + LGDDV
Sbjct: 145 GDQQ-------------SCYKIVNRGSVFAIKDGSGRLMAEVKNKLSDI--SGLDLGDDV 189
Query: 203 FTLVVRP 209
T++V P
Sbjct: 190 LTMMVEP 196
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.132 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,767,650
Number of extensions: 238051
Number of successful extensions: 419
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 417
Number of HSP's successfully gapped: 11
Length of query: 372
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 272
Effective length of database: 8,364,969
Effective search space: 2275271568
Effective search space used: 2275271568
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)