Os03g0816800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF567 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0816800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF567 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 215.7 | 0.69 | 6.74 | 1.04 | 0.641 | -1.47 | -0.238 | 0.996 | 0.251 | 19.4 | 20.1 | 3539 | -- | -- |
| 216.22 | 0.685 | 6.71 | 1.16 | 0.643 | -1.71 | -0.148 | -- | 0.284 | 19.7 | 19.71 | 3518 | -- | -- |
| 215.84 | 0.684 | 6.74 | 1.04 | 0.64 | -1.43 | -- | 1.1 | 0.247 | 19.5 | 20.2 | 3553 | -- | -- |
| 216.02 | 0.685 | 6.71 | 1.11 | 0.64 | -1.86 | -- | -- | 0.272 | 19.5 | 19.55 | 3570 | -- | -- |
| 237.73 | 0.718 | 6.72 | 1.03 | -- | -1.46 | -- | 0.991 | 0.245 | -- | 20.25 | 3576 | -- | -- |
| 247.93 | 0.738 | 6.65 | 1.83 | 0.647 | -- | -0.13 | -- | 0.532 | 19.7 | -- | -- | -- | -- |
| 247.98 | 0.737 | 6.65 | 1.83 | 0.646 | -- | -- | -- | 0.532 | 19.7 | -- | -- | -- | -- |
| 237.94 | 0.718 | 6.7 | 1.07 | -- | -1.86 | -- | -- | 0.252 | -- | 19.76 | 3575 | -- | -- |
| 225.16 | 0.699 | 6.76 | -- | 0.647 | -2.24 | -- | -- | 0.0453 | 19.6 | 19.38 | 11265 | -- | -- |
| 270.52 | 0.769 | 6.64 | 1.82 | -- | -- | -- | -- | 0.523 | -- | -- | -- | -- | -- |
| 336.52 | 0.858 | 6.7 | -- | 0.633 | -- | -- | -- | 0.328 | 20 | -- | -- | -- | -- |
| 247.45 | 0.733 | 6.75 | -- | -- | -2.3 | -- | -- | 0.0431 | -- | 19.4 | 10782 | -- | -- |
| 358.35 | 0.884 | 6.68 | -- | -- | -- | -- | -- | 0.32 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 204.93 | wind | 7 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 2 | 204.96 | wind | 7 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 3 | 205.00 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 11 | 205.44 | wind | 7 | 14400 | > th | dose dependent | rect. | 17 | 10 |
| 22 | 205.67 | wind | 5 | 14400 | > th | dose dependent | rect. | 20 | 4 |
| 26 | 205.74 | wind | 7 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 41 | 205.94 | wind | 7 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 49 | 206.03 | wind | 9 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 70 | 206.21 | wind | 5 | 14400 | > th | dose dependent | rect. | 16 | 18 |
| 76 | 206.28 | wind | 5 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 79 | 206.31 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 90 | 206.40 | wind | 5 | 14400 | < th | dose independent | rect. | 15 | 19 |
| 104 | 206.47 | wind | 5 | 14400 | > th | dose dependent | sin | 12 | NA |
| 115 | 206.57 | wind | 5 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 124 | 206.63 | wind | 9 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 127 | 206.63 | wind | 5 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 130 | 206.64 | wind | 7 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 145 | 206.72 | wind | 7 | 14400 | < th | dose independent | sin | 12 | NA |
| 151 | 206.75 | wind | 7 | 14400 | > th | dose independent | sin | 12 | NA |
| 152 | 206.75 | wind | 7 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 154 | 206.75 | wind | 7 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 173 | 206.83 | humidity | 70 | 43200 | > th | dose independent | rect. | 22 | 14 |
| 213 | 207.03 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 14 |
| 241 | 207.18 | radiation | 10 | 4320 | > th | dose dependent | rect. | 17 | 14 |
| 310 | 207.46 | humidity | 70 | 43200 | > th | dose independent | sin | 7 | NA |
| 327 | 207.51 | humidity | 70 | 43200 | < th | dose independent | sin | 7 | NA |
| 353 | 207.61 | radiation | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 393 | 207.71 | humidity | 80 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 442 | 207.91 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 462 | 208.05 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 501 | 208.26 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 21 |
| 525 | 208.36 | humidity | 70 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 528 | 208.37 | humidity | 70 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 612 | 208.78 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 621 | 208.82 | humidity | 80 | 43200 | < th | dose dependent | rect. | 23 | 14 |
| 631 | 208.85 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 21 |
| 633 | 208.86 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 681 | 209.05 | humidity | 70 | 43200 | > th | dose dependent | rect. | 19 | 12 |
| 684 | 209.07 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 720 | 209.20 | humidity | 80 | 43200 | < th | dose dependent | sin | 7 | NA |
| 740 | 209.25 | humidity | 50 | 43200 | > th | dose dependent | rect. | 20 | 13 |
| 781 | 209.36 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 820 | 209.44 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 841 | 209.49 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 870 | 209.54 | humidity | 60 | 43200 | > th | dose dependent | sin | 9 | NA |
| 989 | 209.73 | humidity | 90 | 43200 | < th | dose dependent | rect. | 22 | 1 |