Os05g0311500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF567 family protein.
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Os05g0311500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF567 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.29 | 0.524 | 14.5 | 0.362 | 2.81 | 1.35 | 0.444 | -0.744 | 0.111 | 10.5 | 78.98 | 1302 | -- | -- |
| 124.64 | 0.52 | 14.5 | 0.422 | 2.85 | 1.29 | 0.489 | -- | 0.128 | 10.5 | 78.9 | 1262 | -- | -- |
| 124.99 | 0.521 | 14.5 | 0.375 | 2.85 | 1.33 | -- | -0.799 | 0.112 | 10.5 | 78.77 | 1262 | -- | -- |
| 125.48 | 0.522 | 14.5 | 0.406 | 2.86 | 1.26 | -- | -- | 0.117 | 10.5 | 76.63 | 1259 | -- | -- |
| 484.27 | 1.03 | 14.5 | 0.378 | -- | 1.04 | -- | 0.14 | 0.221 | -- | 78.77 | 1262 | -- | -- |
| 146.67 | 0.568 | 14.4 | 0.492 | 2.74 | -- | 0.403 | -- | 0.188 | 10.3 | -- | -- | -- | -- |
| 147.33 | 0.568 | 14.4 | 0.508 | 2.74 | -- | -- | -- | 0.189 | 10.3 | -- | -- | -- | -- |
| 484.4 | 1.03 | 14.5 | 0.374 | -- | 1.04 | -- | -- | 0.219 | -- | 78.77 | 1262 | -- | -- |
| 129.72 | 0.53 | 14.5 | -- | 2.88 | 1.31 | -- | -- | 0.0614 | 10.5 | 76.83 | 1243 | -- | -- |
| 604.03 | 1.15 | 14.5 | 0.465 | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
| 154.13 | 0.581 | 14.5 | -- | 2.73 | -- | -- | -- | 0.133 | 10.3 | -- | -- | -- | -- |
| 488.08 | 1.03 | 14.5 | -- | -- | 1.04 | -- | -- | 0.178 | -- | 78.77 | 1262 | -- | -- |
| 609.72 | 1.15 | 14.5 | -- | -- | -- | -- | -- | 0.129 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.41 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 2 | 114.56 | temperature | 20.0 | 270 | > th | dose independent | rect. | 16 | 17 |
| 8 | 115.71 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 9 | 115.71 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 19 | 116.14 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 7 |
| 35 | 116.86 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 37 | 117.04 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 38 | 117.04 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 39 | 117.19 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 18 |
| 43 | 117.35 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 83 | 118.57 | temperature | 20.0 | 90 | > th | dose independent | sin | 10 | NA |
| 88 | 118.69 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 89 | 118.73 | temperature | 20.0 | 10 | > th | dose independent | sin | 9 | NA |
| 91 | 118.80 | temperature | 20.0 | 10 | > th | dose independent | rect. | 16 | 20 |
| 125 | 119.97 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 10 |
| 151 | 120.73 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 15 |
| 155 | 120.75 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 170 | 120.98 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 200 | 121.59 | humidity | 60.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 207 | 121.75 | temperature | 20.0 | 10 | > th | dose independent | rect. | 16 | 12 |
| 213 | 121.87 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 219 | 121.94 | temperature | 20.0 | 10 | < th | dose independent | sin | 9 | NA |
| 234 | 122.14 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 22 |
| 243 | 122.21 | humidity | 80.0 | 720 | > th | dose independent | rect. | 14 | 13 |
| 248 | 122.29 | temperature | 20.0 | 90 | < th | dose independent | rect. | 21 | 10 |
| 249 | 122.31 | temperature | 20.0 | 90 | < th | dose independent | sin | 10 | NA |
| 254 | 122.34 | temperature | 20.0 | 270 | < th | dose independent | rect. | 20 | 8 |
| 255 | 122.36 | temperature | 20.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 262 | 122.45 | temperature | 20.0 | 10 | < th | dose independent | rect. | 20 | 12 |
| 300 | 122.81 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 310 | 122.85 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 340 | 122.97 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 363 | 123.19 | humidity | 80.0 | 720 | < th | dose independent | rect. | 12 | 10 |
| 385 | 123.30 | humidity | 80.0 | 720 | < th | dose independent | rect. | 12 | 14 |
| 446 | 123.58 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 4 |
| 512 | 123.90 | temperature | 20.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 548 | 124.01 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 6 |
| 582 | 124.15 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 6 |
| 617 | 124.31 | humidity | 90.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 625 | 124.34 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 638 | 124.39 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 639 | 124.40 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 18 | 8 |
| 646 | 124.41 | humidity | 80.0 | 720 | > th | dose independent | sin | 17 | NA |
| 649 | 124.41 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 739 | 124.84 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 18 | NA |
| 743 | 124.85 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 18 |
| 765 | 124.94 | humidity | 80.0 | 720 | < th | dose independent | sin | 17 | NA |
| 777 | 124.96 | humidity | 80.0 | 720 | > th | dose independent | rect. | 14 | 7 |
| 808 | 125.06 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 842 | 125.16 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 18 |
| 893 | 125.33 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 2 |
| 913 | 125.40 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 11 |
| 998 | 125.63 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 1000 | 125.64 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 1 |