BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0311500 Os05g0311500|AK058638
(215 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0311500 Protein of unknown function DUF567 family protein 304 3e-83
Os12g0120100 Protein of unknown function DUF567 family protein 121 4e-28
Os11g0120300 Protein of unknown function DUF567 family protein 120 6e-28
Os01g0817650 Protein of unknown function DUF567 family protein 117 8e-27
Os05g0484800 Protein of unknown function DUF567 family protein 113 1e-25
>Os05g0311500 Protein of unknown function DUF567 family protein
Length = 215
Score = 304 bits (779), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 159/215 (73%), Positives = 159/215 (73%)
Query: 1 MTKVHPNXXXXXXXXXXXXXXXXXSLTVWRRSLLFNGKGFTVFDGKGNLVFRVESYAGGS 60
MTKVHPN SLTVWRRSLLFNGKGFTVFDGKGNLVFRVESYAGGS
Sbjct: 1 MTKVHPNVAVVAPAVVEEEKGEAVSLTVWRRSLLFNGKGFTVFDGKGNLVFRVESYAGGS 60
Query: 61 PREVVLMDADGRALLTIRRKKLSFADEWLIYXXXXXXXXXXXXKRFTARRHVSLRPTKXX 120
PREVVLMDADGRALLTIRRKKLSFADEWLIY KRFTARRHVSLRPTK
Sbjct: 61 PREVVLMDADGRALLTIRRKKLSFADEWLIYDGDAASPAAPGPKRFTARRHVSLRPTKSL 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXCRYDVEGSYAARCLDVFASASAGEQRRRVAAVCSK 180
CRYDVEGSYAARCLDVFASASAGEQRRRVAAVCSK
Sbjct: 121 AHLSPARASSSAAAGGGSATAPSGACRYDVEGSYAARCLDVFASASAGEQRRRVAAVCSK 180
Query: 181 EAAVGPDVFRLVVEPGFEPALAMAVVILLDQMHAS 215
EAAVGPDVFRLVVEPGFEPALAMAVVILLDQMHAS
Sbjct: 181 EAAVGPDVFRLVVEPGFEPALAMAVVILLDQMHAS 215
>Os12g0120100 Protein of unknown function DUF567 family protein
Length = 222
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 96/189 (50%), Gaps = 18/189 (9%)
Query: 26 LTVWRRSLLFNGKGFTVFDGKGNLVFRVESYAGGSPR--EVVLMDADGRALLTIRRKKLS 83
LTVWR+SLLFN GFTVFD KGNL FR++ Y S R ++VLMDA G+ LLTIRRK++S
Sbjct: 35 LTVWRKSLLFNCHGFTVFDAKGNLAFRLDCYDSTSSRRADLVLMDAAGKPLLTIRRKRMS 94
Query: 84 FADEWLIYXXXXXXXXXXXXKRFTARRHVSLRPTKXXXXXXXXXXXXXXXXXXXXXXXXX 143
+D W+IY RR V LR +K
Sbjct: 95 LSDSWIIYDGDGAATSTATPLLSVRRRRVGLRASKSKAIAHVTPLSSSLPLPEA------ 148
Query: 144 XXCRYDVEGSYAARCLDVFASASAGEQRRRVAAVCSKEAAVGPDVFRLVVEPGFEPALAM 203
Y VEGSY R S + + R A ++ +VG DVFRLV +P LAM
Sbjct: 149 ----YVVEGSYGRR------SCAVRDARGDAVAEVRRKESVGDDVFRLVAQPRLGAPLAM 198
Query: 204 AVVILLDQM 212
A+VI +D+M
Sbjct: 199 AIVIAIDEM 207
>Os11g0120300 Protein of unknown function DUF567 family protein
Length = 212
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 96/189 (50%), Gaps = 18/189 (9%)
Query: 26 LTVWRRSLLFNGKGFTVFDGKGNLVFRVESYAGGSPR--EVVLMDADGRALLTIRRKKLS 83
LTVWR+SLLFN GFTVFD KGNL FR++ Y S R ++VLMDA G+ LLTIRRK++S
Sbjct: 35 LTVWRKSLLFNCHGFTVFDAKGNLAFRLDCYDSTSSRRADLVLMDAAGKPLLTIRRKRMS 94
Query: 84 FADEWLIYXXXXXXXXXXXXKRFTARRHVSLRPTKXXXXXXXXXXXXXXXXXXXXXXXXX 143
+D W+IY RR V LR +K
Sbjct: 95 LSDSWIIYDGDGAATSTATPLLSVRRRRVGLRASKSKAIAHVTPLSSSLPLPEA------ 148
Query: 144 XXCRYDVEGSYAARCLDVFASASAGEQRRRVAAVCSKEAAVGPDVFRLVVEPGFEPALAM 203
Y VEGSY R S + + R A ++ +VG DVFRLV +P LAM
Sbjct: 149 ----YVVEGSYGRR------SCAVRDARGDAVAEVRRKESVGDDVFRLVAQPRLGAPLAM 198
Query: 204 AVVILLDQM 212
A+VI +D+M
Sbjct: 199 AIVIAIDEM 207
>Os01g0817650 Protein of unknown function DUF567 family protein
Length = 213
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 99/189 (52%), Gaps = 22/189 (11%)
Query: 26 LTVWRRSLLFNGKGFTVFDGKGNLVFRVESYAGGSPREVVLMDADGRALLTIRRKK-LSF 84
LTVWR+SLLFN KGFTVFD KGNL +RV+SY S EVVLMDA G T+RRK+ LS
Sbjct: 33 LTVWRKSLLFNCKGFTVFDAKGNLAYRVDSYDTESGDEVVLMDAAGAPAFTVRRKRQLSL 92
Query: 85 -ADEWLIYXXXXXXXXXXXXKRFTARRHVSLRPTKXXXXXXXXXXXXXXXXXXXXXXXXX 143
++WL++ + RR
Sbjct: 93 QGEQWLVFAGEADGRRPPV---YAVRR-----------TGRGGGKSLARVTPCAGAAAAG 138
Query: 144 XXCRYDVEGSYAARCLDVFASASAGEQRRRVAAVCSKEAAVGPDVFRLVVEPGFEPALAM 203
Y+VEGSYA RC V+ +RR VA V KE AVG DVFRLVV+PG +LAM
Sbjct: 139 ASAAYEVEGSYARRCCVVYDG-----ERRAVAEVRPKE-AVGTDVFRLVVQPGVGVSLAM 192
Query: 204 AVVILLDQM 212
AVV+ LDQM
Sbjct: 193 AVVVALDQM 201
>Os05g0484800 Protein of unknown function DUF567 family protein
Length = 234
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 99/193 (51%), Gaps = 21/193 (10%)
Query: 26 LTVWRRSLLFNGKGFTVFDGKGNLVFRVESYAGGSPREVVLMDADGRALLTIRRKKLSFA 85
LTVWR+SLLFN +GFTVFD G+LV+RV+SYA S EVVLMDA G +LT+RRKK +
Sbjct: 45 LTVWRKSLLFNCRGFTVFDASGDLVYRVDSYAADSRAEVVLMDAAGVPVLTVRRKKAIGS 104
Query: 86 ------DEWLIYXXXXXXXXXXXXKRFTARRHVSLRPTKXXXXXXXXXXXXXXXXXXXXX 139
D+WL++ +++ T
Sbjct: 105 QLGLGGDQWLVHPGEETRLPPLY----------AVKRTPQYVRGGGSVKTMAHVAPCGVA 154
Query: 140 XXXXXXCRYDVEGSYAARCLDVFASASAGEQRRRVAAVCSKEAAVGPDVFRLVVEPGFEP 199
Y++EGSY R V+ + +RR V A + AVG DVFRLVV PG E
Sbjct: 155 LGAGGGGGYEIEGSYLRRSCAVYDA-----RRRAVVAEVQAKEAVGTDVFRLVVRPGMEV 209
Query: 200 ALAMAVVILLDQM 212
++AMAVV+ L+QM
Sbjct: 210 SVAMAVVLALEQM 222
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,578,039
Number of extensions: 183722
Number of successful extensions: 549
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 545
Number of HSP's successfully gapped: 6
Length of query: 215
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 118
Effective length of database: 11,971,043
Effective search space: 1412583074
Effective search space used: 1412583074
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 154 (63.9 bits)