BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0726600 Os06g0726600|AK111844
(479 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0726600 Protein of unknown function DUF300 family protein 896 0.0
Os02g0670000 Protein of unknown function DUF300 family protein 520 e-148
Os05g0516900 Protein of unknown function DUF300 family protein 410 e-114
Os04g0563100 Protein of unknown function DUF300 family protein 149 4e-36
Os07g0244300 Protein of unknown function DUF300 family protein 140 2e-33
Os07g0506000 Protein of unknown function DUF300 family protein 110 3e-24
Os03g0406900 Protein of unknown function DUF300 family protein 108 1e-23
>Os06g0726600 Protein of unknown function DUF300 family protein
Length = 479
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/479 (91%), Positives = 440/479 (91%)
Query: 1 MELAEQLYSVFRSYAPPIWASITAGIFVITXXXXXXXXXXXXXXAYKNPEEQKFLVGVIL 60
MELAEQLYSVFRSYAPPIWASITAGIFVIT AYKNPEEQKFLVGVIL
Sbjct: 1 MELAEQLYSVFRSYAPPIWASITAGIFVITSLSLSLFLLFNHLSAYKNPEEQKFLVGVIL 60
Query: 61 MVPCYAVESYISLVNPSISVDIEILRDGYEAFAMYCFGRYLVACLGGEDRTIEFLKREGS 120
MVPCYAVESYISLVNPSISVDIEILRDGYEAFAMYCFGRYLVACLGGEDRTIEFLKREGS
Sbjct: 61 MVPCYAVESYISLVNPSISVDIEILRDGYEAFAMYCFGRYLVACLGGEDRTIEFLKREGS 120
Query: 121 SGSDVPLLDHETGQRYVNHPFPMNYMLKPWPLGEWFYLVIKFGLVQYVIIKTICAILAVI 180
SGSDVPLLDHETGQRYVNHPFPMNYMLKPWPLGEWFYLVIKFGLVQYVIIKTICAILAVI
Sbjct: 121 SGSDVPLLDHETGQRYVNHPFPMNYMLKPWPLGEWFYLVIKFGLVQYVIIKTICAILAVI 180
Query: 181 LESFGVYCEGEFKWNCGYSYTAVVLNFSQSWALYCLVQFYAAIKDELAHIKPLAKFLTFK 240
LESFGVYCEGEFKWNCGYSYTAVVLNFSQSWALYCLVQFYAAIKDELAHIKPLAKFLTFK
Sbjct: 181 LESFGVYCEGEFKWNCGYSYTAVVLNFSQSWALYCLVQFYAAIKDELAHIKPLAKFLTFK 240
Query: 241 SIVFLTWWQGVVIALLYNWGLLRGPIAQELQFKSSIQDFIICIEMGVASIAHLYVFPAKP 300
SIVFLTWWQGVVIALLYNWGLLRGPIAQELQFKSSIQDFIICIEMGVASIAHLYVFPAKP
Sbjct: 241 SIVFLTWWQGVVIALLYNWGLLRGPIAQELQFKSSIQDFIICIEMGVASIAHLYVFPAKP 300
Query: 301 YEMMGDRFIGGVSVLGDYASVDCPLDPDEVKDSERPTKTRLPQPGDRVRCSTGIKESVRD 360
YEMMGDRFIGGVSVLGDYASVDCPLDPDEVKDSERPTKTRLPQPGDRVRCSTGIKESVRD
Sbjct: 301 YEMMGDRFIGGVSVLGDYASVDCPLDPDEVKDSERPTKTRLPQPGDRVRCSTGIKESVRD 360
Query: 361 VVLGGGEYIVNDLKFTVNHAVEPINEKLHRISQNIXXXXXXXXXTNDDSCINSQQSLSRV 420
VVLGGGEYIVNDLKFTVNHAVEPINEKLHRISQNI TNDDSCINSQQSLSRV
Sbjct: 361 VVLGGGEYIVNDLKFTVNHAVEPINEKLHRISQNIKKHEKEKKKTNDDSCINSQQSLSRV 420
Query: 421 ISGIDDPLLNGSLSDNSGQKKSRKHRRKXXXXXXXXXXXXXXXXLGGYEIRGHRWITRE 479
ISGIDDPLLNGSLSDNSGQKKSRKHRRK LGGYEIRGHRWITRE
Sbjct: 421 ISGIDDPLLNGSLSDNSGQKKSRKHRRKSGYGSAESGGESSDQGLGGYEIRGHRWITRE 479
>Os02g0670000 Protein of unknown function DUF300 family protein
Length = 475
Score = 520 bits (1340), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/463 (56%), Positives = 322/463 (69%), Gaps = 8/463 (1%)
Query: 14 YAPPIWASITAGIFVITXXXXXXXXXXXXXXAYKNPEEQKFLVGVILMVPCYAVESYISL 73
YA P WA + +G F++ AY NPEEQKF++GVILMVPCYAVESY+SL
Sbjct: 15 YAAPTWAILISGFFMLLSVSLSMYLIFQHLSAYNNPEEQKFVLGVILMVPCYAVESYVSL 74
Query: 74 VNPSISVDIEILRDGYEAFAMYCFGRYLVACLGGEDRTIEFLKREGSSGSDVPLLDHETG 133
VNP SV ILRD YEAFAMYCFGRY+ ACLGGE+RTI FLKREG S PLL +
Sbjct: 75 VNPDTSVYCGILRDAYEAFAMYCFGRYITACLGGEERTIAFLKREGGGDSGEPLLHGASE 134
Query: 134 QRYVNHPFPMNYMLKPWPLGEWFYLVIKFGLVQYVIIKTICAILAVILESFGVYCEGEFK 193
+ ++H FP+NY+LKPW +G FY +IKFG+ QYVIIKT+ A L++IL+ FG YC+GEF
Sbjct: 135 KGIIHHHFPVNYILKPWRMGVRFYQIIKFGIFQYVIIKTLTASLSLILQPFGAYCDGEFN 194
Query: 194 WNCGYSYTAVVLNFSQSWALYCLVQFYAAIKDELAHIKPLAKFLTFKSIVFLTWWQGVVI 253
CGY Y A VLNFSQ WALYCLV++Y A KDELAHIKPLAKFL+FKSIVFLTWWQG++I
Sbjct: 195 LRCGYPYFAAVLNFSQYWALYCLVEWYTATKDELAHIKPLAKFLSFKSIVFLTWWQGIMI 254
Query: 254 ALLYNWGLLRGPIAQELQFKSSIQDFIICIEMGVASIAHLYVFPAKPYEMMGD-RFIGGV 312
A++Y+ GL+R P+AQ L+ KSSIQDFIICIEMG+AS+ HLYVFPAKPY ++G+ R +
Sbjct: 255 AIMYSLGLVRSPLAQSLELKSSIQDFIICIEMGIASVVHLYVFPAKPYSLLGNHRSPENI 314
Query: 313 SVLGDYASVDCPLDPDEVKDSERPTKTRLPQPGDRVRCSTGIKESVRDVVLGGGEYIVND 372
SVLGDYA+ D P+DPDE+KD RPTK RLPQ T +KESVRD V+G GEY++ D
Sbjct: 315 SVLGDYAATD-PVDPDEIKDISRPTKLRLPQLEPDEIIVTNVKESVRDFVIGSGEYVIKD 373
Query: 373 LKFTVNHAVEPINEKLHRISQNIXXXXXXXXXTNDDSCINSQQSLSRVISGIDDPLLNGS 432
LKFT+ AV P+ ++ ++ + + DD+ + S + R I GIDDPL+ GS
Sbjct: 374 LKFTMKQAVRPVGKRFEKLMKK----KGKFGQSRDDNWV-STSTPQRAIHGIDDPLICGS 428
Query: 433 LSDNSGQKKSRKHRRKXXXXXXXXXXXXXXXXLGGYEIRGHRW 475
SD SG + ++HRR GY IRG RW
Sbjct: 429 SSD-SGIGRGKRHRRDVSSAGVVDSWEGSDQTSDGYVIRGRRW 470
>Os05g0516900 Protein of unknown function DUF300 family protein
Length = 488
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 286/439 (65%), Gaps = 13/439 (2%)
Query: 17 PIWASITAGIFVITXXXXXXXXXXXXXXAYKNPEEQKFLVGVILMVPCYAVESYISLVNP 76
P W ++AGI V AY PEEQKFL+G+ILMVP YAV+S+ SL+N
Sbjct: 39 PSWPIVSAGISVTASLVLSLFLIFEHLCAYHQPEEQKFLIGLILMVPVYAVQSFFSLLNS 98
Query: 77 SISVDIEILRDGYEAFAMYCFGRYLVACLGGEDRTIEFLKREGSSGSDVPLLDHETGQRY 136
+++ E++RD YEAFAMYCF RYL+ACLGGE+ TI F++ PLLD +
Sbjct: 99 NVAFICELMRDCYEAFAMYCFERYLIACLGGEESTIRFMEGRFQFSESSPLLDVDYDYGI 158
Query: 137 VNHPFPMNYMLKPWPLGEWFYLVIKFGLVQYVIIKTICAILAVILESFGVYCEGEFKWNC 196
V HPFP+N+ ++ W LG FY +K G+VQY+I+K ICAILA+ ++ G+Y EG+F W
Sbjct: 159 VKHPFPLNWFMRNWYLGPDFYHAVKVGIVQYMILKPICAILAIFMQLIGIYGEGKFAWRY 218
Query: 197 GYSYTAVVLNFSQSWALYCLVQFYAAIKDELAHIKPLAKFLTFKSIVFLTWWQGVVIALL 256
GY Y A+VLNFSQ+WALYCL+QFY A K++L IKPL+KFLTFKSIVFLTWWQG+ +A L
Sbjct: 219 GYPYLAIVLNFSQTWALYCLIQFYTATKEKLEPIKPLSKFLTFKSIVFLTWWQGIAVAFL 278
Query: 257 YNWGLLRGPIAQELQFKSSIQDFIICIEMGVASIAHLYVFPAKPYEMMGDRFIGGVSVLG 316
++ GL +G +AQ +F++ IQD+IIC+EMGVA++ HL VFPAKPY G+R + V+V+
Sbjct: 279 FSTGLFKGHLAQ--RFQTRIQDYIICLEMGVAAVVHLKVFPAKPYR-RGERSVSNVAVMS 335
Query: 317 DYASVDCPLDPDEVKDSERPTKTRLPQPGDRVRCSTGIKESVRDVVLGGGEYIVNDLKFT 376
DYAS+ DP+E ++ + + +P R R +SVRDVVLG GE +V+D+K+T
Sbjct: 336 DYASLGAS-DPEEEREIDNVAIMQAARPDSRDR-RLSFPQSVRDVVLGSGEIMVDDVKYT 393
Query: 377 VNHAVEP-------INEKLHRISQNIXXXXXXXXXTNDDSCINSQQSLSRVISGIDDPLL 429
V+H VEP IN LH+IS+N+ DDS + + S + D +
Sbjct: 394 VSHVVEPVERSFSKINRTLHQISENVKQLEKQKRKAKDDSDV-PLEPFSEEFAEAHDNVF 452
Query: 430 NGSLSDNSGQKKSRKHRRK 448
GS+SD+ +K K+ ++
Sbjct: 453 GGSVSDSGLARKKYKNTKR 471
>Os04g0563100 Protein of unknown function DUF300 family protein
Length = 104
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 80/92 (86%)
Query: 196 CGYSYTAVVLNFSQSWALYCLVQFYAAIKDELAHIKPLAKFLTFKSIVFLTWWQGVVIAL 255
C Y Y A VLNFSQ WALYCLV++Y A KDELAHIKPLAKFL+FKSIVFLTWWQGVVIA+
Sbjct: 1 CRYPYFAAVLNFSQYWALYCLVEWYTATKDELAHIKPLAKFLSFKSIVFLTWWQGVVIAI 60
Query: 256 LYNWGLLRGPIAQELQFKSSIQDFIICIEMGV 287
+Y+ GLLR P+AQ L+ KSSIQDFIICIE+ V
Sbjct: 61 MYSLGLLRSPLAQSLELKSSIQDFIICIEVLV 92
>Os07g0244300 Protein of unknown function DUF300 family protein
Length = 403
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 135/266 (50%), Gaps = 21/266 (7%)
Query: 46 YKNPEEQKFLVGVILMVPCYAVESYISLVNPSISVDIEILRDGYEAFAMYCFGRYLVACL 105
Y P Q+F+V +ILMVP YAV S++SLV P ++ +R+ Y+A+ +Y F +A +
Sbjct: 36 YAEPTHQRFIVRIILMVPVYAVMSFLSLVLPGSAIYFNSIREIYDAWVIYNFFSLCLAWV 95
Query: 106 GGEDRTIEFLKREGSSGSDVPLLDHETGQRYVNHPFPMNYMLKPWPLGEWFYLVIKFGLV 165
GG + L TG+ F M PL F K G +
Sbjct: 96 GGPGAVVVSL----------------TGRSLKPSWFMMTCCFSAVPLDGRFIRRCKQGCL 139
Query: 166 QYVIIKTICAILAVILESFGVYCEGEFKWNCGYSYTAVVLNFSQSWALYCLVQFYAAIKD 225
Q+VI+K I ++ IL + G Y +G F N Y Y ++ S S AL+ L FY A +D
Sbjct: 140 QFVILKPILVVITFILYAKGKYEDGNFSVNQSYLYITIIYTISYSMALFALALFYVACRD 199
Query: 226 ELAHIKPLAKFLTFKSIVFLTWWQGVVIALLYNWGLLRGPIAQELQFKSSIQDFIICIEM 285
L P+ KF+ KS+VFLT+WQGV++ L ++ A+E + +Q+F++C+EM
Sbjct: 200 LLQPYNPVPKFIIIKSVVFLTYWQGVLVFLAAKSRFIKN--AEEAAY---LQNFVLCVEM 254
Query: 286 GVASIAHLYVFPAKPYEMMGDRFIGG 311
+A+I H + F K Y R GG
Sbjct: 255 LIAAIGHQFAFSYKEYAGSNARPFGG 280
>Os07g0506000 Protein of unknown function DUF300 family protein
Length = 301
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 139/265 (52%), Gaps = 29/265 (10%)
Query: 46 YKNPEEQKFLVGVILMVPCYAVESYISLVN----PSISVDIEILRDGYEAFAMYCFGRYL 101
+KNP+EQK ++ ++LM P YA+ S++ L++ + ++ +++ YEA A+ F +
Sbjct: 46 WKNPKEQKAILIIVLMAPLYAINSFVGLLDIKGSKTFFTFLDAVKECYEALAIAKFMALM 105
Query: 102 VACLGGEDRTIEFLKREGSSGSDVPLLDHETGQRYVNHPFPMNYML-KPWPLGEWFYLVI 160
+ L S + VP E R ++H FP++ L + L ++
Sbjct: 106 YSYLNI-----------SISKNIVP---DEIKGRVLHHSFPVSLFLPRNVRLEHKTLKLL 151
Query: 161 KFGLVQYVIIKTICAILAVILESFGVYCEGEFKWNCGYSYTAVVLNFSQSWALYCLVQFY 220
K+ Q+V+++ ICAIL + L+ G+Y W +++T ++LNFS S ALY LV FY
Sbjct: 152 KYWTWQFVVVRPICAILMITLQLLGLYPS----W-VSWTFT-IILNFSVSMALYALVIFY 205
Query: 221 AAIKDELAHIKPLAKFLTFKSIVFLTWWQGVVIALLYNWGLLRGP---IAQELQFKSSIQ 277
ELA KPLAKFL K IVF ++WQG + +L G+++ + E + +IQ
Sbjct: 206 HLFAKELAPHKPLAKFLCIKGIVFFSFWQGFALEVLAAVGIIQSHHFWLDVE-HIQEAIQ 264
Query: 278 DFIICIEMGVASIAHLYVFPAKPYE 302
+ ++ IEM S+ Y + PY
Sbjct: 265 NVLVIIEMVFFSVLQQYAYHVAPYS 289
>Os03g0406900 Protein of unknown function DUF300 family protein
Length = 120
Score = 108 bits (270), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/88 (55%), Positives = 70/88 (79%), Gaps = 4/88 (4%)
Query: 198 YSYTAVVLNFSQSWALYCLVQFYAAIKDELAHIKPLAKFLTFKSIVFLTWWQGVVIALLY 257
Y Y AVV+NFSQ+WALYCLV+FY A ++L I+PLAKF++FK+IVF TWWQG+ IA++
Sbjct: 33 YPYIAVVINFSQTWALYCLVKFYNATHEKLQEIRPLAKFISFKAIVFATWWQGLGIAIIC 92
Query: 258 NWGLLRGPIAQELQFKSSIQDFIICIEM 285
+ G+L +E + +++IQDF+ICIE+
Sbjct: 93 HIGIL----PKEGKVQNAIQDFLICIEV 116
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.141 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,301,637
Number of extensions: 614229
Number of successful extensions: 987
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 970
Number of HSP's successfully gapped: 7
Length of query: 479
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 374
Effective length of database: 11,553,331
Effective search space: 4320945794
Effective search space used: 4320945794
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)