Os02g0670000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF300 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0670000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF300 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.83 | 0.252 | 10.2 | -1.88 | 0.52 | 0.574 | 0.554 | -2.47 | -0.207 | 7.31 | 26.06 | 1239 | -- | -- |
| 30.42 | 0.257 | 10.1 | -1.28 | 0.509 | 0.309 | 0.619 | -- | -0.0633 | 7.26 | 26.01 | 1243 | -- | -- |
| 29.61 | 0.253 | 10.2 | -1.88 | 0.526 | 0.579 | -- | -2.51 | -0.217 | 7.22 | 25.9 | 1217 | -- | -- |
| 31.31 | 0.261 | 10.1 | -1.27 | 0.511 | 0.309 | -- | -- | -0.0702 | 7.13 | 26.2 | 1245 | -- | -- |
| 43.5 | 0.307 | 10.2 | -1.72 | -- | 0.501 | -- | -1.64 | -0.223 | -- | 24.03 | 1297 | -- | -- |
| 34.33 | 0.275 | 10.1 | -1.18 | 0.514 | -- | 0.564 | -- | -0.0542 | 6.91 | -- | -- | -- | -- |
| 35.12 | 0.278 | 10.1 | -1.17 | 0.517 | -- | -- | -- | -0.0561 | 6.74 | -- | -- | -- | -- |
| 44.85 | 0.312 | 10.1 | -1.27 | -- | 0.307 | -- | -- | -0.0691 | -- | 25.93 | 1323 | -- | -- |
| 69.83 | 0.389 | 10.1 | -- | 0.5 | 0.175 | -- | -- | 0.107 | 7.04 | 33.9 | 1117 | -- | -- |
| 49.1 | 0.327 | 10.1 | -1.16 | -- | -- | -- | -- | -0.0459 | -- | -- | -- | -- | -- |
| 71.16 | 0.395 | 10.1 | -- | 0.503 | -- | -- | -- | 0.0742 | 6.88 | -- | -- | -- | -- |
| 78.57 | 0.413 | 10.1 | -- | -- | -0.444 | -- | -- | 0.117 | -- | 24.3 | 393 | -- | -- |
| 84.44 | 0.429 | 10.1 | -- | -- | -- | -- | -- | 0.0825 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 9 | 27.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 15 |
| 87 | 29.01 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 16 |
| 91 | 29.03 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 105 | 29.12 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 125 | 29.21 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 134 | 29.24 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 136 | 29.25 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 167 | 29.32 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 172 | 29.33 | temperature | 20 | 10 | > th | dose dependent | sin | 11 | NA |
| 173 | 29.33 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 180 | 29.34 | temperature | 20 | 30 | > th | dose independent | rect. | 16 | 17 |
| 204 | 29.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 220 | 29.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 256 | 29.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 302 | 29.49 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 304 | 29.49 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 315 | 29.49 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 318 | 29.50 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 433 | 29.56 | wind | 3 | 43200 | > th | dose dependent | rect. | 10 | 7 |
| 439 | 29.57 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 442 | 29.57 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 467 | 29.59 | wind | 5 | 43200 | < th | dose independent | rect. | 12 | 13 |
| 531 | 29.61 | radiation | 1 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 539 | 29.62 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 556 | 29.63 | wind | 5 | 43200 | < th | dose independent | sin | 20 | NA |
| 558 | 29.63 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 581 | 29.64 | wind | 5 | 43200 | > th | dose independent | sin | 20 | NA |
| 609 | 29.65 | temperature | 20 | 30 | > th | dose independent | rect. | 16 | 15 |
| 615 | 29.65 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 655 | 29.67 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 4 |
| 660 | 29.67 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 679 | 29.68 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 692 | 29.69 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 694 | 29.69 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 762 | 29.71 | radiation | 40 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 842 | 29.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 932 | 29.77 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 939 | 29.78 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 943 | 29.78 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 7 |
| 977 | 29.79 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 979 | 29.79 | radiation | 1 | 1440 | < th | dose dependent | rect. | 22 | 7 |