Os07g0244300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF300 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0244300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF300 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.37 | 0.237 | 10.4 | 0.302 | 0.0592 | 0.425 | 0.273 | 1.47 | 0.051 | 2.81 | 18.7 | 558 | -- | -- |
| 26.75 | 0.241 | 10.4 | 0.0124 | 0.00983 | 0.432 | 0.272 | -- | -0.026 | 21.7 | 20.79 | 637 | -- | -- |
| 25.51 | 0.235 | 10.4 | 0.317 | 0.0227 | 0.407 | -- | 1.49 | 0.0576 | 2.49 | 18.8 | 661 | -- | -- |
| 27.06 | 0.242 | 10.4 | 0.00862 | 0.0637 | 0.492 | -- | -- | -0.0339 | 4.57 | 21 | 587 | -- | -- |
| 25.52 | 0.235 | 10.4 | 0.31 | -- | 0.409 | -- | 1.47 | 0.0553 | -- | 18.7 | 704 | -- | -- |
| 30.88 | 0.26 | 10.4 | 0.137 | 0.135 | -- | 0.467 | -- | 0.0532 | 20.7 | -- | -- | -- | -- |
| 31.59 | 0.263 | 10.4 | 0.122 | 0.135 | -- | -- | -- | 0.0534 | 20.4 | -- | -- | -- | -- |
| 27.17 | 0.243 | 10.4 | 0.00234 | -- | 0.457 | -- | -- | -0.0325 | -- | 20.96 | 681 | -- | -- |
| 27.04 | 0.242 | 10.4 | -- | 0.0872 | 0.492 | -- | -- | -0.0339 | 3.85 | 20.9 | 525 | -- | -- |
| 32.6 | 0.267 | 10.4 | 0.121 | -- | -- | -- | -- | 0.052 | -- | -- | -- | -- | -- |
| 31.98 | 0.265 | 10.4 | -- | 0.134 | -- | -- | -- | 0.0398 | 20.5 | -- | -- | -- | -- |
| 27.17 | 0.243 | 10.4 | -- | -- | 0.455 | -- | -- | -0.0282 | -- | 20.9 | 681 | -- | -- |
| 32.99 | 0.268 | 10.4 | -- | -- | -- | -- | -- | 0.0386 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.71 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 12 | 24.84 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 14 | 24.85 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 28 | 24.92 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 3 |
| 37 | 24.97 | temperature | 10 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 46 | 25.03 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 77 | 25.20 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 80 | 25.21 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 81 | 25.21 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 104 | 25.29 | temperature | 25 | 4320 | < th | dose independent | sin | 12 | NA |
| 116 | 25.32 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 120 | 25.33 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 124 | 25.34 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 4 |
| 152 | 25.36 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 163 | 25.38 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 186 | 25.39 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 9 |
| 188 | 25.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 210 | 25.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 224 | 25.42 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 19 |
| 226 | 25.43 | temperature | 25 | 4320 | > th | dose independent | sin | 12 | NA |
| 239 | 25.44 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 4 |
| 247 | 25.44 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 254 | 25.45 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 289 | 25.48 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 315 | 25.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 392 | 25.54 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 394 | 25.54 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 399 | 25.55 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 453 | 25.57 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 472 | 25.59 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 6 |
| 608 | 25.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 637 | 25.67 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 681 | 25.69 | temperature | 15 | 4320 | > th | dose dependent | sin | 14 | NA |
| 725 | 25.71 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 767 | 25.73 | temperature | 30 | 4320 | < th | dose dependent | sin | 13 | NA |
| 779 | 25.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 944 | 25.79 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 952 | 25.79 | temperature | 30 | 720 | > th | dose independent | rect. | 16 | 22 |
| 974 | 25.79 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |