BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0724300 Os06g0724300|AK121941
(468 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0724300 Protein of unknown function DUF616 family protein 900 0.0
Os05g0531500 Protein of unknown function DUF616 family protein 268 5e-72
Os11g0198100 Protein of unknown function DUF616 family protein 198 6e-51
Os01g0210400 Protein of unknown function DUF616 family protein 172 6e-43
Os01g0749100 Protein of unknown function DUF616 family protein 151 1e-36
Os02g0745800 Protein of unknown function DUF616 family protein 80 3e-15
Os01g0304300 Protein of unknown function DUF616 family protein 67 4e-11
>Os06g0724300 Protein of unknown function DUF616 family protein
Length = 468
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/468 (93%), Positives = 437/468 (93%)
Query: 1 MARRSKGGGAEGDGMRMQVVWRKGAVRXXXXXXXXXXXXXXXXXXFHLWSCNSDVPFLSA 60
MARRSKGGGAEGDGMRMQVVWRKGAVR FHLWSCNSDVPFLSA
Sbjct: 1 MARRSKGGGAEGDGMRMQVVWRKGAVRLVLVSAIAWALLVILALAFHLWSCNSDVPFLSA 60
Query: 61 LCKKDSKVLYALDSIRSSSKPLHRCPIPVADDPDSITIPKRTPNTIVKRLSYITVDKQDK 120
LCKKDSKVLYALDSIRSSSKPLHRCPIPVADDPDSITIPKRTPNTIVKRLSYITVDKQDK
Sbjct: 61 LCKKDSKVLYALDSIRSSSKPLHRCPIPVADDPDSITIPKRTPNTIVKRLSYITVDKQDK 120
Query: 121 DPSPLFGGRQSWKQREDSFKLNATMKVHCGFMKNSGADMDDVDVKYIQKCKFVVASGIFD 180
DPSPLFGGRQSWKQREDSFKLNATMKVHCGFMKNSGADMDDVDVKYIQKCKFVVASGIFD
Sbjct: 121 DPSPLFGGRQSWKQREDSFKLNATMKVHCGFMKNSGADMDDVDVKYIQKCKFVVASGIFD 180
Query: 181 GYDIPHQPSNISIRSQKLFCFLMVVDEVSLDFIEKNTTVKFDKAGGKWVGIWRLITLHRL 240
GYDIPHQPSNISIRSQKLFCFLMVVDEVSLDFIEKNTTVKFDKAGGKWVGIWRLITLHRL
Sbjct: 181 GYDIPHQPSNISIRSQKLFCFLMVVDEVSLDFIEKNTTVKFDKAGGKWVGIWRLITLHRL 240
Query: 241 PFDEPRRNGKVPKILTHRLFPQAWYSIWIDGKMELIVDPLLILERYLWRGKYTFAVAVHK 300
PFDEPRRNGKVPKILTHRLFPQAWYSIWIDGKMELIVDPLLILERYLWRGKYTFAVAVHK
Sbjct: 241 PFDEPRRNGKVPKILTHRLFPQAWYSIWIDGKMELIVDPLLILERYLWRGKYTFAVAVHK 300
Query: 301 HHKSIYEEGDAIKRRKRYARPLVDLQMKMYYHEGMEPWNPKKRMPSDVPEGAVLIREHTT 360
HHKSIYEEGDAIKRRKRYARPLVDLQMKMYYHEGMEPWNPKKRMPSDVPEGAVLIREHTT
Sbjct: 301 HHKSIYEEGDAIKRRKRYARPLVDLQMKMYYHEGMEPWNPKKRMPSDVPEGAVLIREHTT 360
Query: 361 MSDLFSCLWFNEVNLFTPRDQLSFGYVVYRLGDALKFFMFPNCEYNSLFILHRHTREHSS 420
MSDLFSCLWFNEVNLFTPRDQLSFGYVVYRLGDALKFFMFPNCEYNSLFILHRHTREHSS
Sbjct: 361 MSDLFSCLWFNEVNLFTPRDQLSFGYVVYRLGDALKFFMFPNCEYNSLFILHRHTREHSS 420
Query: 421 KVEWAKTIDEIVXXXXXXXXXXXXXWTPYPADLSSVELPSVKRTSPAG 468
KVEWAKTIDEIV WTPYPADLSSVELPSVKRTSPAG
Sbjct: 421 KVEWAKTIDEIVKKGLKESKGGLGLWTPYPADLSSVELPSVKRTSPAG 468
>Os05g0531500 Protein of unknown function DUF616 family protein
Length = 575
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/368 (38%), Positives = 221/368 (60%), Gaps = 20/368 (5%)
Query: 72 LDSIRSSSKPLHRCPIPVADDPDSITIPKRTPNTIVKRLSYITVDKQDKDPS---PLFGG 128
+D R+ +P C +PV D ++ P+ +P+ ++K LSY+ D + S +FGG
Sbjct: 153 VDPKRTGPRPCDVCYVPV-DQAFALMPPQPSPSPVLKNLSYVFEDNITANFSNQGSVFGG 211
Query: 129 RQSWKQREDSFKLNATMKVHCGFMKN------SGADMDDVDVKYIQKCK-FVVASGIFDG 181
S +QR SF ++ +M VHCGF++ SG D++D D+ ++KC+ VVAS IF
Sbjct: 212 HPSLEQRNKSFDISESMTVHCGFVRGKKPGQGSGFDINDDDLLEMEKCRELVVASAIFGN 271
Query: 182 YDIPHQPSNISIRSQKLFCFLMVVDEVSLDFIEKNTTVKFDKAGGKWVGIWRLITLHRLP 241
YD+ P N S S+ CF M VDE + +++ ++++ + VG+WRL+ + LP
Sbjct: 272 YDMIQHPRNASEFSKANACFYMFVDEETEAYVKNSSSLYRNNK----VGLWRLVVVRNLP 327
Query: 242 FDEPRRNGKVPKILTHRLFPQAWYSIWIDGKMELIVDPLLILERYLWRGKYTFAVAVHKH 301
+++PRR GK+PK+L HRLFP +S+WID K++L+VDP L+LER+LWR TFA++ H
Sbjct: 328 YEDPRRTGKIPKLLLHRLFPNVRFSVWIDAKLKLVVDPYLLLERFLWRKNATFAISRHYK 387
Query: 302 HKSIYEEGDAIKRRKRYARPLVDLQMKMYYHEGMEPWNPKKR-MPSDVPEGAVLIREHTT 360
++EE +A K +Y +D Q++ Y +EG+ + P K + SDVPEG V+IREH
Sbjct: 388 RFDVFEEAEANKAAGKYDNASIDYQIEFYRNEGLTYYTPAKLPITSDVPEGCVIIREHIP 447
Query: 361 MSDLFSCLWFNEVNLFTPRDQLSFGYVVYRLGDALKFF--MFPNCEYNSLFI--LHRHTR 416
+++LF+CLWFNEV+ FT RDQ+SF V ++ + + MF +CE + I HR
Sbjct: 448 ITNLFTCLWFNEVDRFTSRDQISFSTVRDKIRARVGWMPEMFLDCERRNFVIQGYHRELL 507
Query: 417 EHSSKVEW 424
E W
Sbjct: 508 EQMIASGW 515
>Os11g0198100 Protein of unknown function DUF616 family protein
Length = 247
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 147/237 (62%), Gaps = 11/237 (4%)
Query: 189 SNISIRSQKLFCFLMVVDEVSLDFIEKNTTVKFDKAGGKWVGIWRLITLHRLPFDEPRRN 248
+ I+ S+K CF M +DE++L +E K D +G ++GIW++I + +P+++ RR
Sbjct: 4 TQITSLSKKTVCFAMFLDEITLRTLESEGQ-KMDSSG--FIGIWKIILIKNMPYNDMRRV 60
Query: 249 GKVPKILTHRLFPQAWYSIWIDGKMELIVDPLLILERYLWRGKYTFAVAVHKHHKSIYEE 308
GK+PK L HRLFP + +SIW+D K+ L DP+LILE +LWR Y +A++ H ++EE
Sbjct: 61 GKIPKFLAHRLFPSSRFSIWLDSKLRLQNDPILILEYFLWRHGYEYAISNHYDRHCVWEE 120
Query: 309 GDAIKRRKRYARPLVDLQMKMYYHEGMEPWN---PKKRMPSDVPEGAVLIREHTTMSDLF 365
KR ++ ++D Q + Y +G+ +N P K +PS VPEG+ ++REHT MS+LF
Sbjct: 121 VAQNKRLNKFNHTIIDQQFEFYQADGLTKFNPSDPNKLLPSYVPEGSFIVREHTPMSNLF 180
Query: 366 SCLWFNEVNLFTPRDQLSFGYVVYRL-----GDALKFFMFPNCEYNSLFILHRHTRE 417
SCLWFNEV+ FTPRDQLSF Y +L + MF +CE S+ L H E
Sbjct: 181 SCLWFNEVDRFTPRDQLSFAYTYLKLRRMNPEKPFRLNMFKDCERRSIAKLFHHRSE 237
>Os01g0210400 Protein of unknown function DUF616 family protein
Length = 499
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 161/317 (50%), Gaps = 27/317 (8%)
Query: 126 FGGRQSWKQREDSFK-LNATMKVHCGFMKN----SGADM---------DDVDVKY---IQ 168
F G S +R F ++ +++ CGF K D + + V + ++
Sbjct: 142 FAGNLSTVERRSFFNHTDSAVEIPCGFFKEFPVRESGDFFGQFAFFIEEKILVAHRLAME 201
Query: 169 KCK-FVVASGIFDGYDIPHQPSNISIRSQKLFCFLMVVDEVSLDFIEKNTTVKFDKAGGK 227
KC VVAS IF+ +D QP + + + CF M +D+ + + + + ++
Sbjct: 202 KCNGVVVASAIFNDHDKIRQPKGLGSETLRTVCFFMFIDDATHRVLASHNILAGERGEAG 261
Query: 228 WVGIWRLITL-------HRLPFDEPRRNGKVPKILTHRLFPQAWYSIWIDGKMELIVDPL 280
+G WR+ L HRLP++ P N + K L HRLFP A +S+W+D KM+L VDPL
Sbjct: 262 TIGAWRVARLVAGAGGDHRLPYENPAMNCVIVKYLLHRLFPNARFSVWVDAKMQLTVDPL 321
Query: 281 LILERYLWRGKYTFAVAVHKHHKSIYEEGDAIKRRKRYAR-PLVDLQMKMYYHEGMEPWN 339
L++ ++ AV+ H + EE A R +++ + QM+ Y G++PW+
Sbjct: 322 LLVHSFVAGKGADMAVSKHPFNLHTMEEAIATARWRKWGDVDSIREQMETYCRNGLQPWS 381
Query: 340 PKKR-MPSDVPEGAVLIREHTTMSDLFSCLWFNEVNLFTPRDQLSFGYVVYRLGDALKFF 398
P K PSDVP+ A++IR H SDLFSCL FNE+ F PRDQL+F YV ++ +
Sbjct: 382 PIKLPYPSDVPDTAIIIRRHGLASDLFSCLLFNELEAFNPRDQLAFAYVRDQMSPKVIMN 441
Query: 399 MFPNCEYNSLFILHRHT 415
MF + + + +RH
Sbjct: 442 MFDVEVFEQIAVEYRHN 458
>Os01g0749100 Protein of unknown function DUF616 family protein
Length = 203
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 114/189 (60%), Gaps = 2/189 (1%)
Query: 229 VGIWRLITLHRLPFDEPRRNGKVPKILTHRLFPQAWYSIWIDGKMELIVDPLLILERYLW 288
+G WR+I + LPF + R NGK+PK+LTHRLFP+A YSIW+D K + DP+ +LE LW
Sbjct: 2 IGRWRIIVVRSLPFVDQRLNGKIPKMLTHRLFPEARYSIWVDSKYQFRRDPIGVLEALLW 61
Query: 289 RGKYTFAVAVHKHHKSIYEEGDAIKRRKRYARPLVDLQMKMYYHEGMEPWNPKKRMPSDV 348
R TFA++ H +IY+EG AI ++ + V++Q+ Y +GM P + +
Sbjct: 62 RTNSTFAISEHGARSNIYDEGKAIVQKHKATPEEVEVQLTQYRKDGM-PDEKRLHGLKAL 120
Query: 349 PEGAVLIREHTTMSDLFSCLWFNEVNLFTPRDQLSFGYVVYRLGDALKFFMFPNCEYNSL 408
E +V++RE +++ F C WFNEV FT RDQLSF YV++RL + MF C L
Sbjct: 121 SEASVIVRELAPVTNHFMCAWFNEVVRFTSRDQLSFPYVLWRL-NMPGINMFTVCTRRDL 179
Query: 409 FILHRHTRE 417
HTR+
Sbjct: 180 VNSLGHTRK 188
>Os02g0745800 Protein of unknown function DUF616 family protein
Length = 104
Score = 80.5 bits (197), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 346 SDVPEGAVLIREHTTMSDLFSCLWFNEVNLFTPRDQLSFGYVVYRL-----GDALKFFMF 400
+DVPEG+ ++R HT MS+LFSCLWFNEVN FT RDQLSF Y +L G MF
Sbjct: 18 ADVPEGSFIVRAHTPMSNLFSCLWFNEVNRFTSRDQLSFAYTYLKLRRMNTGKPFHLNMF 77
Query: 401 PNCEYNSLFILHRH 414
+CE ++ L H
Sbjct: 78 KDCERRAITKLFHH 91
>Os01g0304300 Protein of unknown function DUF616 family protein
Length = 90
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 337 PWNPKKRMPSDVPEGAVLIREHTTMSDLFSCLWFNEVNLFTPRDQLSFGYVVYRLGDALK 396
P+N P DVPEG V+IREH +++LF+CLWFNEV+ FT RDQLSF V ++ +
Sbjct: 9 PYNSILCSP-DVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFSTVRDKIRKRVN 67
Query: 397 FF--MFPNCE 404
+ MF +CE
Sbjct: 68 WTADMFLDCE 77
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.138 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,905,507
Number of extensions: 732011
Number of successful extensions: 1370
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1360
Number of HSP's successfully gapped: 7
Length of query: 468
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 364
Effective length of database: 11,605,545
Effective search space: 4224418380
Effective search space used: 4224418380
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)