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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0210400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF616 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.92 (0.0213) R2 : 0.0134
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.112 (0.0449) R2dN8 : 0.0173 R2N8 : 0.0134
σ : 0.402
deviance : 74.2
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
68.77 0.39 2.94 -0.227 0.0559 -0.378 -0.297 1.65 0.0778 7.17 1.066 16 -- --
71.06 0.393 2.92 -0.172 0.0683 -0.253 -0.425 -- 0.0953 6.67 1 16 -- --
68.99 0.387 2.93 -0.239 0.0564 -0.379 -- 1.7 0.0833 7.88 1.086 16 -- --
71.43 0.394 2.92 -0.166 0.0702 -0.262 -- -- 0.0961 8.11 1.1 15 -- --
69.15 0.387 2.94 -0.235 -- -0.4 -- 1.71 0.0792 -- 1.047 16 -- --
72.49 0.399 2.92 -0.132 0.13 -- -0.414 -- 0.0926 5.86 -- -- -- --
72.9 0.4 2.92 -0.135 0.128 -- -- -- 0.0943 6.11 -- -- -- --
71.69 0.394 2.92 -0.167 -- -0.281 -- -- 0.0981 -- 1.1 15 -- --
72.12 0.396 2.91 -- 0.0738 -0.239 -- -- 0.116 8.05 1.066 14 -- --
73.75 0.401 2.92 -0.131 -- -- -- -- 0.0972 -- -- -- -- --
73.38 0.401 2.91 -- 0.126 -- -- -- 0.109 6.17 -- -- -- --
72.4 0.396 2.92 -- -- -0.26 -- -- 0.116 -- 1.063 14 -- --
74.2 0.402 2.92 -- -- -- -- -- 0.112 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 62.83 temperature 25.0 30 < th dose independent rect. 2 1
3 62.90 temperature 30.0 30 < th dose dependent rect. 2 1
4 62.92 atmosphere 1000.0 30 > th dose independent rect. 2 1
5 62.99 atmosphere 995.0 30 > th dose dependent rect. 2 1
6 63.00 temperature 25.0 90 > th dose dependent rect. 1 1
8 63.03 wind 1.0 30 > th dose independent rect. 2 1
13 63.07 wind 3.0 30 < th dose independent rect. 2 1
14 63.09 wind 9.0 30 < th dose independent rect. 2 1
15 63.09 temperature 10.0 30 > th dose independent rect. 2 1
18 63.09 humidity 50.0 30 > th dose independent rect. 2 1
22 63.09 atmosphere 1010.0 30 < th dose independent rect. 2 1
24 63.09 radiation 1.0 30 < th dose independent rect. 2 1
29 63.09 precipitation 0.1 30 < th dose independent rect. 2 1
30 63.09 temperature 10.0 30 > th dose independent rect. 3 23
31 63.09 radiation 1.0 30 < th dose dependent rect. 2 1
36 63.09 precipitation 0.1 30 < th dose dependent rect. 2 1
42 63.15 humidity 50.0 30 > th dose dependent rect. 2 1
43 63.16 wind 9.0 30 < th dose dependent rect. 2 1
50 63.21 temperature 10.0 30 > th dose dependent rect. 2 1
53 63.31 humidity 90.0 30 > th dose independent rect. 2 1
54 63.31 atmosphere 1015.0 30 < th dose dependent rect. 2 1
98 63.85 wind 9.0 1440 < th dose independent rect. 3 1
99 63.85 temperature 10.0 1440 > th dose independent rect. 3 1
102 63.85 temperature 30.0 1440 < th dose independent rect. 3 1
106 63.85 humidity 50.0 1440 > th dose independent rect. 3 1
115 63.85 atmosphere 995.0 1440 > th dose independent rect. 3 1
116 63.85 radiation 1.0 1440 < th dose independent rect. 3 1
136 63.85 temperature 10.0 1440 > th dose independent rect. 4 23
139 63.85 radiation 1.0 1440 < th dose dependent rect. 3 1
159 63.99 atmosphere 995.0 10 > th dose independent rect. 3 23
171 64.53 precipitation 0.1 30 < th dose independent rect. 3 23
172 64.53 precipitation 0.1 30 < th dose dependent rect. 3 23
185 65.67 wind 9.0 30 < th dose independent rect. 3 23
196 66.59 humidity 90.0 90 < th dose independent rect. 1 2
197 66.59 humidity 50.0 30 > th dose independent rect. 3 23
252 67.15 humidity 70.0 10 < th dose dependent rect. 10 1
277 67.53 wind 1.0 10 > th dose independent rect. 11 23
282 67.66 wind 1.0 30 < th dose independent rect. 9 18
285 67.70 humidity 50.0 30 > th dose dependent rect. 3 23
318 67.86 temperature 30.0 30 < th dose independent rect. 3 23
360 68.00 wind 3.0 30 < th dose dependent rect. 9 18
362 68.01 wind 1.0 90 > th dose independent rect. 3 22
363 68.03 wind 1.0 10 < th dose independent rect. 2 8
371 68.08 humidity 70.0 10 < th dose independent rect. 10 1
373 68.08 radiation 40.0 30 > th dose dependent rect. 10 1
375 68.09 humidity 90.0 90 < th dose independent rect. 1 5
380 68.14 wind 1.0 30 > th dose dependent rect. 2 1
382 68.17 humidity 70.0 720 > th dose dependent rect. 3 2
515 68.44 atmosphere 1015.0 90 < th dose independent rect. 3 22
521 68.46 radiation 40.0 90 < th dose dependent rect. 3 22
525 68.50 radiation 20.0 30 > th dose dependent rect. 10 1
528 68.54 wind 1.0 30 < th dose independent rect. 10 1
529 68.54 temperature 10.0 1440 > th dose independent rect. 11 1
533 68.54 atmosphere 995.0 1440 > th dose independent rect. 11 1
536 68.54 precipitation 0.1 1440 < th dose independent rect. 11 1
539 68.54 temperature 10.0 1440 > th dose independent rect. 12 23
542 68.54 wind 1.0 30 < th dose dependent rect. 10 1
543 68.54 precipitation 0.1 1440 < th dose dependent rect. 11 1
559 68.61 atmosphere 1005.0 30 > th dose independent rect. 10 1
561 68.62 radiation 30.0 10 > th dose independent rect. 10 1
565 68.63 atmosphere 995.0 720 > th dose independent rect. 17 22
571 68.65 atmosphere 1005.0 30 > th dose dependent rect. 10 1
575 68.68 atmosphere 1010.0 30 < th dose independent rect. 10 1
577 68.68 humidity 90.0 270 < th dose dependent rect. 23 10
581 68.71 temperature 30.0 30 < th dose independent rect. 10 1
588 68.75 atmosphere 995.0 720 > th dose independent rect. 3 12
614 68.80 temperature 20.0 30 > th dose independent rect. 10 1
624 68.81 temperature 20.0 30 > th dose dependent rect. 10 1
627 68.81 humidity 50.0 90 > th dose dependent rect. 3 11
628 68.82 radiation 40.0 90 < th dose independent rect. 3 22
641 68.85 wind 1.0 10 > th dose independent sin 3 NA
648 68.86 wind 7.0 30 < th dose dependent rect. 10 1
658 68.88 temperature 10.0 30 > th dose independent rect. 10 1
660 68.88 humidity 50.0 30 > th dose independent rect. 10 1
665 68.88 precipitation 0.1 30 < th dose independent rect. 10 1
667 68.88 atmosphere 995.0 720 > th dose independent rect. 3 20
668 68.88 temperature 10.0 30 > th dose independent rect. 11 23
669 68.88 atmosphere 1015.0 10 < th dose independent rect. 3 23
670 68.88 precipitation 0.1 30 < th dose dependent rect. 10 1
673 68.89 precipitation 0.1 720 < th dose independent rect. 15 20
678 68.89 precipitation 0.1 720 < th dose dependent rect. 15 20
679 68.90 wind 1.0 30 > th dose independent rect. 10 1
686 68.91 wind 9.0 10 < th dose dependent rect. 1 11
690 68.92 humidity 90.0 270 < th dose independent rect. 23 10
710 68.93 precipitation 0.1 720 < th dose independent rect. 5 22
718 68.93 precipitation 0.1 720 < th dose dependent rect. 5 22
719 68.94 precipitation 0.1 720 < th dose independent rect. 15 12
720 68.94 precipitation 0.1 720 < th dose dependent rect. 15 12
723 68.95 humidity 70.0 30 > th dose independent rect. 3 22
726 68.96 temperature 10.0 720 > th dose independent rect. 15 2
728 68.96 atmosphere 1015.0 720 < th dose independent rect. 15 2
730 68.96 temperature 10.0 720 > th dose independent rect. 17 22
741 68.98 wind 1.0 10 > th dose independent sin 18 NA
747 68.99 atmosphere 995.0 720 > th dose independent rect. 11 4
756 69.00 precipitation 0.1 720 < th dose independent rect. 15 2
757 69.00 temperature 10.0 720 > th dose independent rect. 3 12
758 69.00 temperature 10.0 720 > th dose independent rect. 15 12
761 69.00 precipitation 0.1 720 < th dose dependent rect. 15 2
786 69.04 wind 9.0 90 < th dose independent rect. 15 12
789 69.05 radiation 40.0 30 < th dose independent rect. 10 1
790 69.05 humidity 70.0 90 > th dose independent rect. 3 10
791 69.05 temperature 10.0 90 > th dose independent rect. 3 12
792 69.05 temperature 10.0 90 > th dose independent rect. 15 12
793 69.05 atmosphere 1015.0 90 < th dose independent rect. 3 12
799 69.06 atmosphere 995.0 90 > th dose independent rect. 3 12
807 69.07 humidity 70.0 720 > th dose independent rect. 3 6
808 69.07 radiation 40.0 90 < th dose independent rect. 15 12
816 69.09 wind 1.0 30 < th dose independent rect. 15 12
817 69.09 temperature 30.0 90 < th dose independent rect. 3 12
824 69.09 radiation 40.0 90 < th dose dependent rect. 15 12
828 69.10 precipitation 0.1 90 < th dose independent rect. 3 12
830 69.10 precipitation 0.1 90 < th dose dependent rect. 3 12
835 69.12 precipitation 0.1 90 < th dose independent rect. 15 12
838 69.12 precipitation 0.1 90 < th dose dependent rect. 15 12
848 69.14 humidity 80.0 720 > th dose independent rect. 3 4
849 69.14 humidity 50.0 720 > th dose independent rect. 3 12
855 69.15 humidity 50.0 90 > th dose independent rect. 3 12
857 69.16 precipitation 0.1 720 < th dose independent rect. 23 4
858 69.16 precipitation 0.1 720 < th dose dependent rect. 23 4
869 69.19 precipitation 0.1 720 < th dose independent rect. 3 2
870 69.19 precipitation 0.1 720 < th dose dependent rect. 3 2
884 69.21 wind 1.0 30 > th dose dependent rect. 10 1
886 69.21 temperature 25.0 270 > th dose dependent rect. 23 3
887 69.21 atmosphere 1005.0 30 > th dose dependent rect. 1 5
893 69.22 wind 7.0 720 < th dose independent rect. 23 4
894 69.22 temperature 10.0 720 > th dose independent rect. 11 4
895 69.22 atmosphere 1015.0 720 < th dose independent rect. 11 4
896 69.22 atmosphere 995.0 720 > th dose independent rect. 17 6
898 69.22 humidity 90.0 270 < th dose independent rect. 23 19
899 69.22 temperature 10.0 720 > th dose independent rect. 15 20
906 69.23 temperature 10.0 720 > th dose independent rect. 23 4
907 69.23 temperature 30.0 720 < th dose independent rect. 23 4
908 69.23 humidity 50.0 720 > th dose independent rect. 23 4
911 69.23 atmosphere 995.0 720 > th dose independent rect. 23 4
912 69.23 radiation 1.0 720 < th dose independent rect. 23 4
917 69.23 precipitation 0.1 720 < th dose independent rect. 11 4
919 69.23 temperature 10.0 720 > th dose independent rect. 3 20
920 69.23 radiation 1.0 720 < th dose dependent rect. 23 4
925 69.23 precipitation 0.1 720 < th dose dependent rect. 11 4
927 69.24 wind 9.0 720 < th dose independent rect. 15 2
932 69.24 radiation 10.0 30 < th dose independent rect. 3 22
936 69.25 wind 1.0 720 > th dose independent rect. 15 2
953 69.27 atmosphere 1015.0 30 < th dose dependent rect. 10 1
957 69.28 atmosphere 995.0 90 > th dose independent rect. 15 12
970 69.30 wind 1.0 30 < th dose independent rect. 17 10
975 69.31 wind 1.0 720 > th dose independent rect. 11 4
999 69.34 precipitation 0.1 720 < th dose independent rect. 3 12