Os02g0745800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF616 family protein.
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Os02g0745800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF616 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 283.83 | 0.792 | 4.1 | 0.193 | 0.581 | 0.239 | -0.355 | 3.87 | -0.319 | 22.9 | 20.67 | 4171 | -- | -- |
| 298.33 | 0.804 | 4.13 | -0.0919 | 0.667 | 0.474 | -0.149 | -- | -0.419 | 22.6 | 22.1 | 4365 | -- | -- |
| 284.33 | 0.785 | 4.1 | 0.201 | 0.583 | 0.246 | -- | 3.78 | -0.321 | 22.8 | 20.67 | 4178 | -- | -- |
| 297.9 | 0.804 | 4.14 | -0.0951 | 0.673 | 0.399 | -- | -- | -0.429 | 22.5 | 20.81 | 21656 | -- | -- |
| 304.52 | 0.813 | 4.09 | 0.186 | -- | 0.434 | -- | 3.58 | -0.338 | -- | 21.19 | 4107 | -- | -- |
| 303.23 | 0.816 | 4.12 | -0.196 | 0.612 | -- | -0.0786 | -- | -0.385 | 23 | -- | -- | -- | -- |
| 303.26 | 0.816 | 4.12 | -0.193 | 0.613 | -- | -- | -- | -0.384 | 23 | -- | -- | -- | -- |
| 317.65 | 0.83 | 4.15 | 0.0537 | -- | 0.707 | -- | -- | -0.389 | -- | 22.12 | 3890 | -- | -- |
| 296.92 | 0.803 | 4.16 | -- | 0.587 | 0.416 | -- | -- | -0.513 | 23 | 22.05 | 24496 | -- | -- |
| 326.61 | 0.844 | 4.11 | -0.179 | -- | -- | -- | -- | -0.38 | -- | -- | -- | -- | -- |
| 304.24 | 0.816 | 4.12 | -- | 0.611 | -- | -- | -- | -0.363 | 22.9 | -- | -- | -- | -- |
| 311.82 | 0.822 | 4.13 | -- | -- | 0.628 | -- | -- | -0.577 | -- | 2.48 | 28433 | -- | -- |
| 327.46 | 0.845 | 4.1 | -- | -- | -- | -- | -- | -0.36 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 282.26 | humidity | 90 | 30 | < th | dose independent | rect. | 13 | 20 |
| 3 | 282.37 | humidity | 70 | 90 | > th | dose dependent | rect. | 10 | 15 |
| 6 | 282.98 | radiation | 40 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 7 | 282.99 | humidity | 60 | 10 | > th | dose dependent | rect. | 11 | 16 |
| 10 | 283.09 | temperature | 30 | 90 | < th | dose independent | rect. | 3 | 23 |
| 11 | 283.13 | humidity | 80 | 30 | > th | dose dependent | rect. | 5 | 22 |
| 12 | 283.43 | humidity | 80 | 270 | > th | dose dependent | rect. | 7 | 17 |
| 17 | 283.59 | radiation | 20 | 4320 | > th | dose independent | rect. | 14 | 22 |
| 18 | 283.60 | radiation | 20 | 4320 | > th | dose independent | rect. | 16 | 20 |
| 21 | 283.63 | humidity | 90 | 30 | > th | dose independent | rect. | 5 | 22 |
| 22 | 283.64 | radiation | 20 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 25 | 283.75 | radiation | 20 | 4320 | > th | dose independent | sin | 9 | NA |
| 32 | 283.83 | humidity | 80 | 270 | > th | dose dependent | rect. | 5 | 19 |
| 48 | 284.08 | radiation | 20 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 54 | 284.18 | radiation | 1 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 55 | 284.19 | radiation | 20 | 4320 | > th | dose independent | rect. | 7 | 5 |
| 59 | 284.21 | radiation | 20 | 4320 | > th | dose independent | rect. | 11 | 23 |
| 85 | 284.36 | radiation | 40 | 4320 | > th | dose independent | rect. | 14 | 20 |
| 97 | 284.52 | radiation | 40 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 102 | 284.58 | radiation | 40 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 133 | 284.74 | radiation | 10 | 4320 | > th | dose dependent | rect. | 15 | 21 |
| 135 | 284.76 | radiation | 40 | 4320 | < th | dose dependent | rect. | 15 | 21 |
| 136 | 284.77 | humidity | 50 | 90 | > th | dose dependent | rect. | 4 | 23 |
| 140 | 284.81 | radiation | 20 | 4320 | > th | dose independent | rect. | 7 | 10 |
| 155 | 284.83 | radiation | 20 | 4320 | > th | dose independent | no | NA | NA |
| 261 | 284.97 | radiation | 40 | 4320 | > th | dose independent | sin | 11 | NA |
| 266 | 285.00 | radiation | 40 | 4320 | < th | dose dependent | rect. | 8 | 4 |
| 271 | 285.02 | radiation | 40 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 293 | 285.06 | radiation | 10 | 4320 | > th | dose dependent | rect. | 7 | 5 |
| 340 | 285.14 | radiation | 20 | 4320 | > th | dose dependent | sin | 7 | NA |
| 376 | 285.25 | humidity | 80 | 90 | > th | dose independent | rect. | 10 | 15 |
| 385 | 285.26 | radiation | 40 | 4320 | < th | dose independent | rect. | 21 | 14 |
| 415 | 285.28 | radiation | 40 | 4320 | < th | dose independent | rect. | 24 | 11 |
| 432 | 285.29 | radiation | 40 | 4320 | < th | dose independent | rect. | 5 | 6 |
| 435 | 285.29 | radiation | 40 | 4320 | < th | dose independent | rect. | 18 | 17 |
| 436 | 285.29 | radiation | 40 | 4320 | < th | dose independent | rect. | 16 | 19 |
| 470 | 285.32 | radiation | 40 | 4320 | < th | dose independent | rect. | 3 | 8 |
| 487 | 285.35 | radiation | 20 | 720 | < th | dose dependent | rect. | 4 | 17 |
| 493 | 285.37 | radiation | 20 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 541 | 285.45 | radiation | 40 | 4320 | < th | dose independent | sin | 9 | NA |
| 552 | 285.47 | radiation | 10 | 720 | < th | dose independent | rect. | 4 | 17 |
| 560 | 285.48 | radiation | 40 | 4320 | < th | dose dependent | rect. | 22 | 14 |
| 580 | 285.49 | radiation | 40 | 4320 | < th | dose dependent | rect. | 24 | 12 |
| 594 | 285.51 | radiation | 40 | 4320 | < th | dose dependent | rect. | 3 | 9 |
| 684 | 285.62 | radiation | 10 | 720 | < th | dose independent | sin | 3 | NA |
| 686 | 285.62 | radiation | 40 | 4320 | < th | dose dependent | sin | 5 | NA |
| 687 | 285.62 | radiation | 20 | 4320 | > th | dose dependent | rect. | 8 | 9 |
| 779 | 285.69 | radiation | 20 | 4320 | > th | dose dependent | rect. | 11 | 23 |
| 780 | 285.70 | radiation | 20 | 720 | < th | dose dependent | sin | 3 | NA |
| 817 | 285.72 | radiation | 20 | 4320 | > th | dose dependent | no | NA | NA |