BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0691400 Os06g0691400|AK107208
(510 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0691400 Similar to IAA-amino acid conjugate hydrolase-... 876 0.0
Os01g0706900 Similar to Auxin amidohydrolase 444 e-125
Os01g0560000 Similar to Auxin amidohydrolase 432 e-121
Os04g0521800 Peptidase M20 family protein 369 e-102
Os03g0836900 Similar to IAA-amino acid hydrolase 1 (EC 3.5.... 363 e-100
Os03g0836800 Similar to IAA-amino acid hydrolase 1 (EC 3.5.... 204 1e-52
Os07g0249800 Similar to IAA-amino acid hydrolase 1 (EC 3.5.... 162 8e-40
Os07g0249900 Peptidase M20 family protein 117 2e-26
Os07g0249700 Peptidase M20 family protein 67 4e-11
>Os06g0691400 Similar to IAA-amino acid conjugate hydrolase-like protein
(Fragment)
Length = 510
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/510 (86%), Positives = 442/510 (86%)
Query: 1 MEHGGHELAXXXXXXXXXXSATSCTFLEEDVILGTVEEAKVARLXXXXXXXSKGANASTR 60
MEHGGHELA SATSCTFLEEDVILGTVEEAKVARL SKGANASTR
Sbjct: 1 MEHGGHELAVVVLVLLLLVSATSCTFLEEDVILGTVEEAKVARLGGGGGGGSKGANASTR 60
Query: 61 RADNTCAXXXXXXXXXXXXXXXXXXXXXXXFYLGWKEEIAGMAGRPETAAWLRAVRRRIH 120
RADNTCA FYLGWKEEIAGMAGRPETAAWLRAVRRRIH
Sbjct: 61 RADNTCAGVGVGVGGGGGGGGGGGGGGRGRFYLGWKEEIAGMAGRPETAAWLRAVRRRIH 120
Query: 121 ERPELAYEEVETSRLVRDELDAMGVGFRHPVARTGVVANIGTGRPPVVALRADMDALPIQ 180
ERPELAYEEVETSRLVRDELDAMGVGFRHPVARTGVVANIGTGRPPVVALRADMDALPIQ
Sbjct: 121 ERPELAYEEVETSRLVRDELDAMGVGFRHPVARTGVVANIGTGRPPVVALRADMDALPIQ 180
Query: 181 EAVEWEHKSKNPGKMHACGHDAHVAMLLGAAKILKAREHHLRGTVRLLFQPAEESGAGAK 240
EAVEWEHKSKNPGKMHACGHDAHVAMLLGAAKILKAREHHLRGTVRLLFQPAEESGAGAK
Sbjct: 181 EAVEWEHKSKNPGKMHACGHDAHVAMLLGAAKILKAREHHLRGTVRLLFQPAEESGAGAK 240
Query: 241 RMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTGPLLAGCGFFKAVIHGGRRSGDAVLAAA 300
RMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTGPLLAGCGFFKAVIHGGRRSGDAVLAAA
Sbjct: 241 RMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTGPLLAGCGFFKAVIHGGRRSGDAVLAAA 300
Query: 301 STIISLQSIVSREADPLDSQVVSVAMVNGSDHPXXXXXXXXXXXXXXFVLGGTFRAFSNA 360
STIISLQSIVSREADPLDSQVVSVAMVNGSDHP FVLGGTFRAFSNA
Sbjct: 301 STIISLQSIVSREADPLDSQVVSVAMVNGSDHPAATARAAAAEEEEEFVLGGTFRAFSNA 360
Query: 361 SFYQVRRRIEEVITAQARVHGCEAAVDFFENQSFYPPTVNDARMYAHVKAVAGELLGAGS 420
SFYQVRRRIEEVITAQARVHGCEAAVDFFENQSFYPPTVNDARMYAHVKAVAGELLGAGS
Sbjct: 361 SFYQVRRRIEEVITAQARVHGCEAAVDFFENQSFYPPTVNDARMYAHVKAVAGELLGAGS 420
Query: 421 YRDVPPMMGAEDFSFYSQVVPAGFYYIGVRNETLGSVHTGHSPYFMIDEDVLPTGAAFHA 480
YRDVPPMMGAEDFSFYSQVVPAGFYYIGVRNETLGSVHTGHSPYFMIDEDVLPTGAAFHA
Sbjct: 421 YRDVPPMMGAEDFSFYSQVVPAGFYYIGVRNETLGSVHTGHSPYFMIDEDVLPTGAAFHA 480
Query: 481 AIAERYLANHXXXXXXXXXXXXXXVELEAS 510
AIAERYLANH VELEAS
Sbjct: 481 AIAERYLANHSPSSSSSSDSDDPDVELEAS 510
>Os01g0706900 Similar to Auxin amidohydrolase
Length = 456
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/396 (58%), Positives = 283/396 (71%), Gaps = 19/396 (4%)
Query: 103 AGRPETAAWLRAVRRRIHERPELAYEEVETSRLVRDELDAMGVGFRHPVARTGVVANIGT 162
A RPE AAW+ VR IHERPELA+EE+ETSRLVR ELDAMGV +RHPVA TGVVA +GT
Sbjct: 54 ARRPEFAAWMAGVRWAIHERPELAFEEIETSRLVRAELDAMGVAYRHPVAGTGVVATVGT 113
Query: 163 GRPPVVALRADMDALPIQEAVEWEHKSKNPGKMHACGHDAHVAMLLGAAKILKAREHHLR 222
GRPP VALRADMDALP+QE V+WEHKSK KMHACGHDAH MLLGAA+IL+ R H L+
Sbjct: 114 GRPPFVALRADMDALPMQEEVQWEHKSKVAMKMHACGHDAHTTMLLGAARILQERRHELQ 173
Query: 223 GTVRLLFQPAEESGAGAKRMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTGPLLAGCGFF 282
GTV LLFQP EE G GA+RM+E GA+++VEAIF HVS + PT V+GSR GPLLAGCGFF
Sbjct: 174 GTVVLLFQPGEEVGTGARRMVEAGAVDNVEAIFGFHVSVELPTGVVGSRPGPLLAGCGFF 233
Query: 283 KAVIHGG-------RRSGDAVLAAASTIISLQSIVSREADPLDSQVVSVAMVNGSDHPXX 335
+AVI G S D +LAA++ +++LQ +VSREADPL++QVV+V D
Sbjct: 234 EAVITGKGGHAAHPHASVDPILAASTVVLALQGLVSREADPLEAQVVTVTRFLAGD---- 289
Query: 336 XXXXXXXXXXXXFVLGGTFRAFSNASFYQVRRRIEEVITAQARVHGCEAAVDFFE-NQSF 394
+GGTFR FSN F +++RRIEEVI AQ+ V+ C AAVDF +
Sbjct: 290 ----ALNVIPESITIGGTFRVFSNEGFLRLKRRIEEVIVAQSAVYRCAAAVDFHAGGRPL 345
Query: 395 YPPTVNDARMYAHVKAVAGELLGAGS--YRDVPPMMGAEDFSFYSQVVPAG-FYYIGVRN 451
PPT+N A ++AH +AVA E LGA + + P MG+EDF+ +S+ VPA FY++GVRN
Sbjct: 346 LPPTINSAALHAHFQAVAAETLGASAAVLGAMEPCMGSEDFAVFSEAVPASHFYFVGVRN 405
Query: 452 ETLGSVHTGHSPYFMIDEDVLPTGAAFHAAIAERYL 487
E G VH HSP+F +D+ LP GAA HA++A RYL
Sbjct: 406 EAEGLVHLAHSPHFRVDDAALPYGAALHASLAMRYL 441
>Os01g0560000 Similar to Auxin amidohydrolase
Length = 442
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/393 (55%), Positives = 273/393 (69%), Gaps = 17/393 (4%)
Query: 107 ETAAWLRAVRRRIHERPELAYEEVETSRLVRDELDAMGVGFRHPVARTGVVANIGTGRPP 166
E A W+ +RRRIHE PEL YEE TS LVR ELDA+G+ +RHP A TGVVA +GTG PP
Sbjct: 44 EFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPP 103
Query: 167 VVALRADMDALPIQEAVEWEHKSKNPGKMHACGHDAHVAMLLGAAKILKAREHHLRGTVR 226
VALRADMDALP+QE+VEWEHKSK PGKMH CGHDAHVAMLLG+A+IL+ L+GTV
Sbjct: 104 FVALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELKGTVV 163
Query: 227 LLFQPAEESGAGAKRMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTGPLLAGCGFFKAVI 286
L+FQPAEE G GAK+MI+ GA+E++EAIF VHV+ P V+ SR GP++AG GFF+AVI
Sbjct: 164 LVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVI 223
Query: 287 HGG-------RRSGDAVLAAASTIISLQSIVSREADPLDSQVVSVAMVNGSDHPXXXXXX 339
G + D +LAA++ I+SLQ +VSREADPLDSQVV+V G
Sbjct: 224 SGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGG--------G 275
Query: 340 XXXXXXXXFVLGGTFRAFSNASFYQVRRRIEEVITAQARVHGCEAAVDFFE-NQSFYPPT 398
+GGTFRAF SF Q+++RIEEVI +QA V C A VDF + ++ F+PPT
Sbjct: 276 AFNVIPDSVTIGGTFRAFLKESFNQLKQRIEEVIVSQASVQRCNAVVDFLDKDRPFFPPT 335
Query: 399 VNDARMYAHVKAVAGELLGAGSYRDVPPMMGAEDFSFYSQVVPAGFYY-IGVRNETLGSV 457
+N A ++ VA E++G + RD P+MGAEDF+FY+ +PA +YY +G+ NET G
Sbjct: 336 INSAGLHDFFVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYYYFLGMYNETRGPQ 395
Query: 458 HTGHSPYFMIDEDVLPTGAAFHAAIAERYLANH 490
HSPYF I+ED LP GAA A++A RYL H
Sbjct: 396 APHHSPYFTINEDALPYGAALQASLAARYLLEH 428
>Os04g0521800 Peptidase M20 family protein
Length = 426
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/406 (48%), Positives = 258/406 (63%), Gaps = 22/406 (5%)
Query: 94 GWKEEIAGMAGRPETAAWLRAVRRRIHERPELAYEEVETSRLVRDELDAMGVGFRHPVAR 153
G++EE A + E W+ VRRRIH PELA+ E TS LVRDEL+ +G+ R VA
Sbjct: 20 GYEEE-ALLRRAEEERDWMVGVRRRIHAHPELAFREHHTSALVRDELERLGLTAR-AVAG 77
Query: 154 TGVVANIGTGRPPVVALRADMDALPIQEAVEWEHKSKNPGKMHACGHDAHVAMLLGAAKI 213
TGVVA++G+G PPVVALRADMDALP+QE VEWEHKSK G MHACGHD H AMLLGAAK+
Sbjct: 78 TGVVADVGSGLPPVVALRADMDALPVQELVEWEHKSKVDGVMHACGHDVHTAMLLGAAKL 137
Query: 214 LKAREHHLRGTVRLLFQPAEESGAGAKRMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTG 273
L R+ ++GTVRLLFQPAEE GAGA MI+ G L+ VEAIF +HV ++ PT VI + G
Sbjct: 138 LSERKEQIKGTVRLLFQPAEEGGAGASYMIKDGVLDGVEAIFGMHVDYRMPTGVIAAHAG 197
Query: 274 PLLAGCGFFKAVIHGGRRSG---------DAVLAAASTIISLQSIVSREADPLDSQVVSV 324
P A F++A I G ++G D ++AA+ I+SLQ ++SRE DPL SQV+SV
Sbjct: 198 PTQAAVCFYEAKIEG--KTGKAETPHLNVDPIVAASFVILSLQQLISREDDPLHSQVLSV 255
Query: 325 AMVNGSDHPXXXXXXXXXXXXXXFVLGGTFRAFSNASFYQVRRRIEEVITAQARVHGCEA 384
V G + GGT R+ + Y++++R++EV+ QA VH C+
Sbjct: 256 TYVKGGN--------TIDATPPVIEFGGTLRSLTTEGLYRLQKRVKEVVEGQAAVHRCKG 307
Query: 385 AVDFF-ENQSFYPPTVNDARMYAHVKAVAGELLGAGSYRDVPPMMGAEDFSFYSQVVPAG 443
V ++ YP ND +++ HV+ V LLG + +M EDF+FY Q+VP
Sbjct: 308 VVQIKRDDYPMYPAVFNDEKLHHHVETVGRRLLGPDKVKPGEKIMAGEDFAFYQQLVPGV 367
Query: 444 FYYIGVRNETLGSVHTGHSPYFMIDEDVLPTGAAFHAAIAERYLAN 489
+ IG+RN +GSVHT H+P F +DEDV+P GAA H A+AE YL
Sbjct: 368 MFGIGIRNGEVGSVHTVHNPKFFVDEDVIPIGAALHTALAEMYLTE 413
>Os03g0836900 Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-)
Length = 414
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/401 (50%), Positives = 252/401 (62%), Gaps = 30/401 (7%)
Query: 106 PETAAWLRAVRRRIHERPELAYEEVETSRLVRDELDAMGVGFRHPVARTGVVANIG--TG 163
PE A WLR +RRRIH+ PELA++E TS LVR ELDA+GV + P+A+TGVVA + G
Sbjct: 16 PEFAGWLRGLRRRIHQHPELAFQEHRTSALVRAELDALGVAYVWPIAQTGVVATVAGAAG 75
Query: 164 RPPVVALRADMDALPIQEAVEWEHKSKNPGKMHACGHDAHVAMLLGAAKILKAREHHLRG 223
PV ALRADMDALPIQE VEWE KS GKMHACGHDAHVAMLL AAK+L++R H G
Sbjct: 76 PGPVFALRADMDALPIQEMVEWEFKSLEDGKMHACGHDAHVAMLLVAAKLLQSRRDHFNG 135
Query: 224 TVRLLFQPAEESGAGAKRMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTGPLLAGCGFFK 283
V+L+FQPA E GAG +++ G L+D + IFAVHV+ P V+GSR GP LAG F
Sbjct: 136 KVKLVFQPA-EGGAGGYHVLKEGVLDDTQTIFAVHVATDLPAGVVGSRPGPFLAGSARFT 194
Query: 284 AVIHGGRRSG---------DAVLAAASTIISLQSIVSREADPLDSQVVSVAMVNGSDHPX 334
A I G + G D ++AA+S ++SLQ IV+RE +PL VVSV + G +
Sbjct: 195 ATITG--KGGHAAEPHLAVDPIVAASSAVLSLQQIVARETNPLQGAVVSVTTIKGGE--- 249
Query: 335 XXXXXXXXXXXXXFVLGGTFRAFSNASFYQVRRRIEEVITAQARVHGCEAAVDFFENQ-S 393
LGGT R+ + + RI EVI QA V+ C AAVDF E++
Sbjct: 250 -----AFNVIPESVTLGGTLRSMTTDGLSYLMNRIREVIEGQAAVNRCTAAVDFMEDKLR 304
Query: 394 FYPPTVNDARMYAHVKAVAGELLGAGSYRDVPPMMGAEDFSFYSQVVPAGFYYIGV---R 450
YP TVND MYAH KAVA +LG + P MGAEDF FY+Q +PA F+ IGV
Sbjct: 305 PYPATVNDEGMYAHAKAVAESMLGEANVTVSPMCMGAEDFGFYAQRIPAAFFGIGVGSNG 364
Query: 451 NETLGSVHTG----HSPYFMIDEDVLPTGAAFHAAIAERYL 487
N+ G T HSP+F++DE+ LP GAAFHAA+A YL
Sbjct: 365 NDGGGMAETTKNQLHSPHFVVDEEALPVGAAFHAAVAIEYL 405
>Os03g0836800 Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-)
Length = 276
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/275 (44%), Positives = 160/275 (58%), Gaps = 21/275 (7%)
Query: 226 RLLFQPAEESGAGAKRMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTGPLLAGCGFFKAV 285
+L+FQPAEE AG ++E GA++DV+ IF +HV P V+ SR GP LAG F A
Sbjct: 1 KLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTAT 60
Query: 286 IHGG-------RRSGDAVLAAASTIISLQSIVSREADPLDSQVVSVAMVNGSDHPXXXXX 338
I+G + D ++A +S ++SLQ IV+RE DPL VVSV + G +
Sbjct: 61 INGKGGHAAAPHHAVDPIVAVSSAVLSLQQIVARETDPLQGAVVSVTTIKGGE------- 113
Query: 339 XXXXXXXXXFVLGGTFRAFSNASFYQVRRRIEEVITAQARVHGCEAAVDFFENQ-SFYPP 397
LGGT R+ + + +RI EVI QA V+ C AAVDF E++ YP
Sbjct: 114 -AFNVIPESVTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPA 172
Query: 398 TVNDARMYAHVKAVAGELLGAGSYRDVPPMMGAEDFSFYSQVVPAGFYYIGVRNETLGSV 457
TVND MYAH KAVA +LG + + P MGAEDF FY+Q +PA F+ IGV N+ G
Sbjct: 173 TVNDEEMYAHAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFGIGVGNDGGGMA 232
Query: 458 HTG-----HSPYFMIDEDVLPTGAAFHAAIAERYL 487
T HSP+F++DE+ LP GAAFHAA+A YL
Sbjct: 233 ETTTKNQLHSPHFVVDEEALPVGAAFHAAVAIEYL 267
>Os07g0249800 Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-)
Length = 222
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 120/202 (59%), Gaps = 13/202 (6%)
Query: 294 DAVLAAASTIISLQSIVSREADPLDSQVVSVAMVNGSDHPXXXXXXXXXXXXXXFVLGGT 353
D V+A +S ++SLQ +VSRE DPL++ VVS+ ++ G D LGGT
Sbjct: 26 DPVVAVSSAVLSLQQLVSRETDPLEAAVVSITILKGGD--------AYNVIPESASLGGT 77
Query: 354 FRAFSNASFYQVRRRIEEVITAQARVHGCEAAVDFFENQ-SFYPPTVNDARMYAHVKAVA 412
FR+ ++ + +RI E+I AQA V+ C AAVDF E + YP TVND MY H KAVA
Sbjct: 78 FRSMTDEGLAYLMKRIREIIEAQAGVNRCAAAVDFLEEELRPYPATVNDDGMYGHAKAVA 137
Query: 413 GELLGAGSYRDVPPMMGAEDFSFYSQVVPAGFYYIGVRNETL----GSVHTGHSPYFMID 468
+LG + R MG EDF+FY++ P F++IGV NET +V HSP+F++D
Sbjct: 138 EAMLGEANVRVAARSMGGEDFAFYARRSPGAFFFIGVGNETTMGPAAAVRPVHSPHFVLD 197
Query: 469 EDVLPTGAAFHAAIAERYLANH 490
E LP GAA HAA+A YL H
Sbjct: 198 ERALPVGAALHAAVAIEYLNKH 219
>Os07g0249900 Peptidase M20 family protein
Length = 159
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 90/145 (62%), Gaps = 4/145 (2%)
Query: 350 LGGTFRAFSNASFYQVRRRIEEVITAQARVHGCEAAVDFFE-NQSFYPPTVNDARMYAHV 408
GGT R+ ++ + +RI+E++ QA V+ C VDF E + YP VND MYAH
Sbjct: 11 FGGTMRSMTDEGLAYLMKRIKEIVEGQAAVNRCGGGVDFMEESMRPYPAVVNDEGMYAHA 70
Query: 409 KAVAGELLGAGSYRDVPPMMGAEDFSFYSQVVPAGFYYIGVRNETLGS---VHTGHSPYF 465
+A A LLGAG R P +MGAEDF FY+ +P+ F+ IGV N T S HT HSP+F
Sbjct: 71 RASAERLLGAGGVRVAPQLMGAEDFGFYAARMPSAFFTIGVGNATTSSARAAHTTHSPHF 130
Query: 466 MIDEDVLPTGAAFHAAIAERYLANH 490
+IDE LP GAA HAA+A YL+ H
Sbjct: 131 VIDEAALPVGAAVHAAVAIDYLSKH 155
>Os07g0249700 Peptidase M20 family protein
Length = 60
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 180 QEAVEWEHKSKNPGKMHACGHDAHVAMLLGAAKILKAREHHLR 222
+E V+WEHKS+ GKMHACGHDAH MLLGAAK+L++++ L+
Sbjct: 12 KELVDWEHKSEESGKMHACGHDAHTTMLLGAAKLLQSQKDDLK 54
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.134 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,718,948
Number of extensions: 635545
Number of successful extensions: 1456
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1427
Number of HSP's successfully gapped: 9
Length of query: 510
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 405
Effective length of database: 11,553,331
Effective search space: 4679099055
Effective search space used: 4679099055
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)