Os03g0836900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-).
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Os03g0836900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193.85 | 0.654 | 4.98 | 1.1 | 0.551 | 0.678 | 1.23 | 1.22 | 0.217 | 7.98 | 999 | 3971 | -- | -- |
| 194.92 | 0.65 | 4.99 | 0.991 | 0.548 | 0.802 | 1.26 | -- | 0.239 | 7.9 | 999.2 | 12533 | -- | -- |
| 198.18 | 0.656 | 4.98 | 1.14 | 0.552 | 0.649 | -- | 1.31 | 0.222 | 8.31 | 999 | 3972 | -- | -- |
| 198.58 | 0.656 | 4.99 | 1.06 | 0.552 | 0.811 | -- | -- | 0.262 | 8.26 | 1002 | 12570 | -- | -- |
| 214.91 | 0.683 | 4.98 | 1.14 | -- | 0.647 | -- | 1.27 | 0.239 | -- | 998.9 | 4086 | -- | -- |
| 210.46 | 0.68 | 5.01 | 1.18 | 0.549 | -- | 1.2 | -- | 0.156 | 7.98 | -- | -- | -- | -- |
| 214.59 | 0.686 | 5.01 | 1.21 | 0.546 | -- | -- | -- | 0.156 | 8.33 | -- | -- | -- | -- |
| 215.04 | 0.683 | 4.99 | 1.07 | -- | 0.805 | -- | -- | 0.281 | -- | 1002 | 12709 | -- | -- |
| 226.75 | 0.701 | 5 | -- | 0.545 | 1.04 | -- | -- | 0.183 | 8 | 1001 | 12729 | -- | -- |
| 231.14 | 0.71 | 5.02 | 1.21 | -- | -- | -- | -- | 0.162 | -- | -- | -- | -- | -- |
| 253.22 | 0.744 | 5.04 | -- | 0.552 | -- | -- | -- | 0.0213 | 8.17 | -- | -- | -- | -- |
| 243.42 | 0.727 | 5.02 | -- | -- | 1.02 | -- | -- | 0.173 | -- | 1001 | 12764 | -- | -- |
| 270.01 | 0.767 | 5.05 | -- | -- | -- | -- | -- | 0.0273 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 191.43 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 12 | 191.86 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 21 | 192.20 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 25 | 192.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 26 | 192.29 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 5 |
| 36 | 192.52 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 40 | 192.57 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 68 | 193.01 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 70 | 193.02 | wind | 9.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 87 | 193.49 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 88 | 193.49 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 90 | 193.49 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 93 | 193.56 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 100 | 193.71 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 103 | 193.81 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 104 | 193.83 | wind | 9.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 108 | 193.88 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 122 | 193.98 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 7 |
| 127 | 194.00 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 169 | 194.11 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 173 | 194.13 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 175 | 194.13 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 176 | 194.13 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 4 | 9 |
| 179 | 194.15 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 188 | 194.17 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 191 | 194.18 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 255 | 194.24 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 269 | 194.28 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 367 | 194.38 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 388 | 194.42 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 389 | 194.42 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 4 | 4 |
| 435 | 194.48 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 440 | 194.48 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 453 | 194.50 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 20 | 12 |
| 470 | 194.51 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 22 | 10 |
| 488 | 194.53 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 16 | 2 |
| 515 | 194.58 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 20 | 16 |
| 534 | 194.60 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 574 | 194.64 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 19 | 7 |
| 584 | 194.65 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 18 | 19 |
| 609 | 194.67 | atmosphere | 1000.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 679 | 194.75 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 689 | 194.76 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 716 | 194.80 | atmosphere | 1000.0 | 4320 | < th | dose independent | sin | 5 | NA |
| 775 | 194.86 | atmosphere | 1000.0 | 4320 | > th | dose independent | sin | 5 | NA |
| 890 | 194.96 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 3 | 18 |