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Os04g0521800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase M20 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0132) R2 : 0.132
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.232 (0.0279) R2dN8 : 0.17 R2N8 : 0.132
σ : 0.249
deviance : 28.55
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.79 0.219 11.5 -0.0255 0.33 -0.372 -0.575 -0.176 0.256 16.2 29 533 -- --
21.81 0.217 11.5 -0.00533 0.33 -0.383 -0.603 -- 0.258 16.2 29 530 -- --
22.66 0.222 11.5 -0.0515 0.328 -0.368 -- -0.351 0.254 16.2 29 511 -- --
22.77 0.222 11.5 -0.000489 0.334 -0.409 -- -- 0.259 16.2 29.16 527 -- --
26.74 0.241 11.5 -0.176 -- -0.108 -- -0.533 0.202 -- 29.02 1383 -- --
25.31 0.236 11.5 -0.06 0.181 -- -0.63 -- 0.232 15.3 -- -- -- --
26.44 0.241 11.5 -0.0722 0.181 -- -- -- 0.228 14.2 -- -- -- --
26.59 0.24 11.5 -0.0105 -- -0.236 -- -- 0.243 -- 28.3 4974 -- --
22.76 0.222 11.5 -- 0.341 -0.417 -- -- 0.259 16.3 29.2 527 -- --
28.38 0.249 11.5 -0.0798 -- -- -- -- 0.223 -- -- -- -- --
26.58 0.241 11.5 -- 0.182 -- -- -- 0.236 14.3 -- -- -- --
26.59 0.24 11.5 -- -- -0.236 -- -- 0.243 -- 28.3 4974 -- --
28.55 0.249 11.5 -- -- -- -- -- 0.232 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.38 temperature 25.0 720 > th dose dependent rect. 8 1
4 20.76 temperature 30.0 270 < th dose independent rect. 11 3
5 20.81 temperature 25.0 90 > th dose dependent rect. 17 18
8 20.96 temperature 25.0 720 > th dose independent rect. 8 1
12 20.98 temperature 25.0 720 > th dose dependent rect. 2 7
13 20.98 temperature 25.0 720 > th dose dependent rect. 2 9
32 21.06 temperature 25.0 270 > th dose dependent rect. 15 20
40 21.16 temperature 10.0 720 > th dose dependent rect. 7 4
44 21.19 temperature 20.0 14400 < th dose independent rect. 21 1
45 21.22 temperature 30.0 270 < th dose independent rect. 9 22
47 21.26 wind 9.0 14400 < th dose independent rect. 18 17
48 21.27 temperature 20.0 14400 > th dose independent rect. 21 1
52 21.32 temperature 20.0 14400 > th dose independent rect. 19 1
53 21.32 temperature 20.0 14400 > th dose independent rect. 19 3
66 21.42 wind 5.0 14400 < th dose independent rect. 21 1
67 21.42 wind 1.0 14400 < th dose independent rect. 1 2
76 21.46 temperature 30.0 270 < th dose independent rect. 10 19
81 21.47 wind 9.0 14400 > th dose independent rect. 17 18
84 21.48 wind 5.0 14400 > th dose independent rect. 21 1
88 21.49 radiation 10.0 270 > th dose independent rect. 16 16
91 21.50 wind 3.0 14400 > th dose dependent rect. 21 1
94 21.50 wind 9.0 14400 > th dose dependent rect. 18 17
108 21.54 wind 5.0 14400 < th dose independent rect. 19 14
121 21.56 wind 3.0 14400 > th dose dependent rect. 19 11
124 21.57 wind 5.0 14400 > th dose independent rect. 19 14
125 21.57 temperature 30.0 720 < th dose independent rect. 19 18
133 21.58 wind 5.0 14400 > th dose dependent rect. 17 18
140 21.59 wind 5.0 14400 > th dose dependent rect. 17 16
165 21.63 wind 9.0 14400 < th dose independent rect. 17 14
168 21.63 temperature 30.0 270 < th dose independent rect. 11 17
176 21.64 wind 9.0 14400 < th dose independent rect. 17 12
196 21.66 temperature 15.0 90 > th dose independent rect. 19 23
202 21.67 wind 9.0 14400 < th dose independent rect. 19 10
206 21.67 wind 7.0 270 < th dose independent rect. 13 22
207 21.67 radiation 1.0 43200 < th dose dependent rect. 19 6
208 21.67 radiation 1.0 43200 < th dose dependent rect. 19 8
217 21.68 wind 5.0 14400 > th dose dependent rect. 19 3
226 21.69 wind 9.0 14400 > th dose dependent rect. 17 13
250 21.71 temperature 25.0 720 > th dose dependent sin 5 NA
257 21.72 wind 5.0 14400 < th dose independent rect. 6 2
261 21.72 wind 9.0 14400 < th dose independent rect. 19 6
264 21.72 wind 9.0 14400 < th dose independent rect. 17 8
266 21.72 wind 9.0 14400 > th dose independent rect. 17 13
276 21.73 wind 5.0 14400 > th dose independent rect. 6 2
285 21.74 wind 9.0 14400 < th dose independent rect. 17 4
300 21.75 wind 9.0 14400 < th dose independent rect. 19 2
309 21.75 wind 9.0 14400 > th dose dependent sin 10 NA
310 21.75 temperature 20.0 14400 < th dose dependent rect. 21 1
324 21.76 temperature 10.0 270 > th dose dependent rect. 6 14
332 21.77 wind 9.0 14400 > th dose independent rect. 19 10
337 21.77 wind 3.0 14400 > th dose dependent sin 11 NA
362 21.79 wind 1.0 14400 < th dose dependent rect. 1 2
368 21.80 wind 5.0 14400 < th dose independent sin 10 NA
383 21.81 wind 9.0 14400 < th dose independent sin 11 NA
386 21.81 humidity 90.0 90 < th dose independent rect. 11 5
414 21.83 wind 5.0 14400 > th dose independent rect. 5 4
415 21.83 wind 5.0 14400 < th dose independent rect. 5 4
422 21.83 wind 9.0 14400 > th dose dependent rect. 17 7
429 21.84 wind 1.0 14400 < th dose independent rect. 22 8
442 21.85 wind 5.0 14400 > th dose independent sin 10 NA
445 21.85 wind 1.0 14400 > th dose independent rect. 1 2
457 21.85 radiation 1.0 43200 < th dose dependent rect. 19 2
484 21.86 temperature 25.0 90 > th dose dependent sin 10 NA
486 21.86 wind 1.0 14400 < th dose dependent rect. 1 5
498 21.87 wind 9.0 14400 > th dose independent rect. 17 8
513 21.88 wind 9.0 14400 > th dose independent sin 11 NA
514 21.88 wind 1.0 14400 < th dose independent rect. 5 1
516 21.88 humidity 90.0 270 < th dose independent rect. 11 2
523 21.88 radiation 10.0 270 > th dose independent rect. 15 18
525 21.88 wind 9.0 14400 > th dose dependent rect. 17 4
540 21.89 wind 9.0 14400 > th dose independent rect. 17 4
542 21.89 wind 7.0 14400 > th dose independent rect. 19 5
573 21.90 temperature 20.0 90 > th dose independent rect. 11 5
607 21.91 wind 1.0 14400 < th dose independent rect. 24 6
640 21.92 wind 5.0 14400 > th dose dependent rect. 7 1
655 21.93 temperature 30.0 720 < th dose independent rect. 4 10
670 21.94 temperature 20.0 270 > th dose independent rect. 11 3
677 21.94 temperature 30.0 720 < th dose independent rect. 2 12
685 21.94 wind 7.0 90 < th dose independent rect. 16 19
686 21.94 temperature 30.0 90 < th dose independent rect. 19 23
722 21.95 radiation 10.0 270 > th dose dependent rect. 16 15
825 21.99 precipitation 0.1 14400 > th dose dependent rect. 17 2
849 22.00 precipitation 0.1 270 < th dose independent rect. 14 21
853 22.00 wind 1.0 14400 < th dose dependent rect. 22 9
857 22.00 precipitation 0.1 270 < th dose dependent rect. 14 21
889 22.02 humidity 90.0 14400 > th dose dependent rect. 21 1
923 22.04 precipitation 0.1 14400 > th dose dependent rect. 14 4
945 22.05 humidity 90.0 14400 > th dose dependent rect. 9 2
947 22.05 precipitation 0.1 14400 > th dose dependent rect. 17 5
953 22.06 humidity 90.0 14400 > th dose independent rect. 9 2