Os07g0249700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase M20 family protein.
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Os07g0249700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase M20 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.32 | 0.259 | 13.2 | -0.298 | 1.48 | 0.627 | 0.519 | 2.24 | 0.327 | 0.845 | 2.227 | 1412 | -- | -- |
| 33.75 | 0.271 | 13.2 | -0.123 | 1.4 | 0.392 | 0.395 | -- | 0.394 | 0.917 | 24.18 | 5905 | -- | -- |
| 30.96 | 0.259 | 13.2 | -0.313 | 1.44 | 0.676 | -- | 2.41 | 0.317 | 0.859 | 2.18 | 1457 | -- | -- |
| 33.58 | 0.27 | 13.2 | -0.156 | 1.4 | 0.388 | -- | -- | 0.435 | 0.759 | 22.29 | 8993 | -- | -- |
| 61.68 | 0.366 | 13.1 | 0.0464 | -- | 2.27 | -- | 1.9 | 0.495 | -- | 2.118 | 1733 | -- | -- |
| 36.82 | 0.284 | 13.2 | -0.089 | 1.42 | -- | 0.33 | -- | 0.327 | 0.859 | -- | -- | -- | -- |
| 37.28 | 0.286 | 13.2 | -0.101 | 1.42 | -- | -- | -- | 0.325 | 0.842 | -- | -- | -- | -- |
| 62.97 | 0.371 | 13.2 | -0.0416 | -- | 1.12 | -- | -- | 0.34 | -- | 22.29 | 8993 | -- | -- |
| 34.16 | 0.272 | 13.2 | -- | 1.39 | 0.386 | -- | -- | 0.458 | 0.738 | 22.74 | 8981 | -- | -- |
| 162.3 | 0.595 | 13.2 | -0.0491 | -- | -- | -- | -- | 0.351 | -- | -- | -- | -- | -- |
| 37.55 | 0.287 | 13.2 | -- | 1.41 | -- | -- | -- | 0.336 | 0.839 | -- | -- | -- | -- |
| 63.01 | 0.371 | 13.2 | -- | -- | 1.12 | -- | -- | 0.345 | -- | 22.29 | 8993 | -- | -- |
| 162.37 | 0.595 | 13.2 | -- | -- | -- | -- | -- | 0.357 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.58 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 2 | 26.73 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 3 | 27.23 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 12 | 28.61 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 14 | 28.66 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 16 | 28.70 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 20 | 28.72 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 10 |
| 24 | 28.75 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 25 | 28.77 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 29 | 28.78 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 43 | 28.90 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 50 | 28.95 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 52 | 28.97 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 53 | 28.97 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 10 |
| 60 | 29.03 | humidity | 80.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 87 | 29.14 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 111 | 29.21 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 124 | 29.24 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 6 |
| 138 | 29.28 | humidity | 80.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 141 | 29.29 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 143 | 29.29 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 148 | 29.30 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 150 | 29.31 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 151 | 29.31 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 157 | 29.32 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 158 | 29.33 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 188 | 29.38 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 235 | 29.46 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 238 | 29.46 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 248 | 29.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 7 |
| 271 | 29.51 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 272 | 29.51 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 279 | 29.52 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 282 | 29.52 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 286 | 29.53 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 293 | 29.54 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 298 | 29.55 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 299 | 29.55 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 309 | 29.55 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 312 | 29.56 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 319 | 29.56 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 4 |
| 330 | 29.57 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 437 | 29.64 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 456 | 29.65 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 12 | 19 |
| 525 | 29.68 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 543 | 29.70 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 4 |
| 553 | 29.71 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 581 | 29.73 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 693 | 29.78 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 738 | 29.80 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 10 |
| 750 | 29.81 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 760 | 29.81 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 15 |
| 783 | 29.82 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 22 | 19 |
| 814 | 29.84 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 853 | 29.85 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 885 | 29.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 977 | 29.91 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 22 | 19 |
| 978 | 29.91 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 22 | 19 |
| 980 | 29.91 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 22 |
| 991 | 29.91 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 22 | 19 |
| 993 | 29.91 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 22 |