BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0275500 Os06g0275500|AK111743
(896 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0275500 Similar to Polycomb protein EZ1 (Enhancer of z... 1671 0.0
Os03g0307800 SET domain-containing protein 496 e-140
Os12g0613200 Similar to Histone-lysine N-methyltransferase,... 106 6e-23
Os09g0134500 Similar to Trithorax-like protein 1 92 1e-18
Os01g0218800 Similar to Trithorax 5 (Fragment) 92 2e-18
Os04g0429100 Similar to SET domain-containing protein SET102 91 5e-18
Os09g0556700 Nuclear protein SET domain containing protein 82 2e-15
Os02g0611300 Nuclear protein SET domain containing protein 77 4e-14
Os08g0442500 74 6e-13
Os02g0554000 Zinc finger, CW-type domain containing protein 72 1e-12
Os09g0307800 Nuclear protein SET domain containing protein 72 2e-12
>Os06g0275500 Similar to Polycomb protein EZ1 (Enhancer of zeste protein 1)
Length = 896
Score = 1671 bits (4328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 815/896 (90%), Positives = 815/896 (90%)
Query: 1 MAGDSRNEPMFCEEGSSESGYVLCVIDSLKKKITSDRFVYIQKRVEENSIKLSPITLHSH 60
MAGDSRNEPMFCEEGSSESGYVLCVIDSLKKKITSDRFVYIQKRVEENSIKLSPITLHSH
Sbjct: 1 MAGDSRNEPMFCEEGSSESGYVLCVIDSLKKKITSDRFVYIQKRVEENSIKLSPITLHSH 60
Query: 61 NLSKNRQTSTSNSTDLVSNLLTKRKEDALCAVNSRESSPDESEGANCQDECSSTVIVGGN 120
NLSKNRQTSTSNSTDLVSNLLTKRKEDALCAVNSRESSPDESEGANCQDECSSTVIVGGN
Sbjct: 61 NLSKNRQTSTSNSTDLVSNLLTKRKEDALCAVNSRESSPDESEGANCQDECSSTVIVGGN 120
Query: 121 LSARNSVRPIRLPEVATLPPYTTWIFLDRNQRMQEDQSVLGRRRIYYDTNCGEALICXXX 180
LSARNSVRPIRLPEVATLPPYTTWIFLDRNQRMQEDQSVLGRRRIYYDTNCGEALIC
Sbjct: 121 LSARNSVRPIRLPEVATLPPYTTWIFLDRNQRMQEDQSVLGRRRIYYDTNCGEALICSDS 180
Query: 181 XXXXXXXXXXXXXXXXXXXCIIRMTIQECGMSDAVLETLARDIERAPDDIKARYEILQGE 240
CIIRMTIQECGMSDAVLETLARDIERAPDDIKARYEILQGE
Sbjct: 181 EDEAVEDEEEKKEFKDSEDCIIRMTIQECGMSDAVLETLARDIERAPDDIKARYEILQGE 240
Query: 241 KPEGSSKKVSELNVKMEDVYGDKDLDAALDSFDNLFCRRCLVFDCKLHGCSQDLVFPTEK 300
KPEGSSKKVSELNVKMEDVYGDKDLDAALDSFDNLFCRRCLVFDCKLHGCSQDLVFPTEK
Sbjct: 241 KPEGSSKKVSELNVKMEDVYGDKDLDAALDSFDNLFCRRCLVFDCKLHGCSQDLVFPTEK 300
Query: 301 QAPLCSSDEGTPCGIHCYKLVSKPDAIMEIDSHLLVDVEEPTSDNLKDQIGSNKXXXXXX 360
QAPLCSSDEGTPCGIHCYKLVSKPDAIMEIDSHLLVDVEEPTSDNLKDQIGSNK
Sbjct: 301 QAPLCSSDEGTPCGIHCYKLVSKPDAIMEIDSHLLVDVEEPTSDNLKDQIGSNKKKLGSS 360
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKSPQHSPGLSKNKLGAKGGIKKSTNRRIA 420
NKSPQHSPGLSKNKLGAKGGIKKSTNRRIA
Sbjct: 361 GQKTKSQQSESSSTARVSSESSESEVQLLSNKSPQHSPGLSKNKLGAKGGIKKSTNRRIA 420
Query: 421 ERILMSVKKGQQEMSPDSNSIVNGCHWPRDMKLRSDTRSGIKDSVVSSQCNSPSTRSFRK 480
ERILMSVKKGQQEMSPDSNSIVNGCHWPRDMKLRSDTRSGIKDSVVSSQCNSPSTRSFRK
Sbjct: 421 ERILMSVKKGQQEMSPDSNSIVNGCHWPRDMKLRSDTRSGIKDSVVSSQCNSPSTRSFRK 480
Query: 481 KGTLQMENNSSFVDAQSDSMEDTNNEHSATDGCDSSRKEECVDESICRQEAHGRSWKVIE 540
KGTLQMENNSSFVDAQSDSMEDTNNEHSATDGCDSSRKEECVDESICRQEAHGRSWKVIE
Sbjct: 481 KGTLQMENNSSFVDAQSDSMEDTNNEHSATDGCDSSRKEECVDESICRQEAHGRSWKVIE 540
Query: 541 QGLLLKGLEIFGKNSCLIARNLLGGMKTCTDVFQYMNYIENSSASGALSGVDSLVKGYMK 600
QGLLLKGLEIFGKNSCLIARNLLGGMKTCTDVFQYMNYIENSSASGALSGVDSLVKGYMK
Sbjct: 541 QGLLLKGLEIFGKNSCLIARNLLGGMKTCTDVFQYMNYIENSSASGALSGVDSLVKGYMK 600
Query: 601 GNELXXXXXXXXXXXXXXXLKYTWKTAGYHFIRKRITERKDQPCRQYTPCGCQSACGKQC 660
GNEL LKYTWKTAGYHFIRKRITERKDQPCRQYTPCGCQSACGKQC
Sbjct: 601 GNELRTRSRFVRRRGRVRRLKYTWKTAGYHFIRKRITERKDQPCRQYTPCGCQSACGKQC 660
Query: 661 PCLTNGTCCEKYCGCPKMCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCG 720
PCLTNGTCCEKYCGCPKMCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCG
Sbjct: 661 PCLTNGTCCEKYCGCPKMCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCG 720
Query: 721 DGTLGVPNQRGDNYECRNMXXXXXXXXRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGEL 780
DGTLGVPNQRGDNYECRNM RVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGEL
Sbjct: 721 DGTLGVPNQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGEL 780
Query: 781 ISHKEADKRGKIYDRENSSFLFNLNNEYVLDAYRMGDKLKFANHSPDPNCYAKVIMVAGD 840
ISHKEADKRGKIYDRENSSFLFNLNNEYVLDAYRMGDKLKFANHSPDPNCYAKVIMVAGD
Sbjct: 781 ISHKEADKRGKIYDRENSSFLFNLNNEYVLDAYRMGDKLKFANHSPDPNCYAKVIMVAGD 840
Query: 841 HRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPEGPGAKDDAQPSTGRAKKLAH 896
HRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPEGPGAKDDAQPSTGRAKKLAH
Sbjct: 841 HRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPEGPGAKDDAQPSTGRAKKLAH 896
>Os03g0307800 SET domain-containing protein
Length = 895
Score = 496 bits (1278), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/419 (59%), Positives = 296/419 (70%), Gaps = 18/419 (4%)
Query: 491 SFVDAQSDSMEDTNNEHSATDGC--------DSSRKEECVDESICRQEAHGRSWKVIEQG 542
S VD Q S++D N + S D C +++ ++ + I +E W +E+
Sbjct: 480 SAVD-QLPSLDDPNKKISTKDMCAGSTTNTTENTLRDNNNNLFISNKEHSISHWSALERD 538
Query: 543 LLLKGLEIFGKNSCLIARNLLGGMKTCTDVFQYMNYIENSSASGALSGVDSL------VK 596
L LKG+EIFGKNSCLIARNLL G+KTC +V YM + A LSG L +
Sbjct: 539 LYLKGIEIFGKNSCLIARNLLSGLKTCMEVASYMYNNGAAMAKRPLSGKSILGDFAEAEQ 598
Query: 597 GYMKGNELXXXXXXXXXXXXXXXLKYTWKTAGYHFIRKRITERKDQPCRQYTPCGCQSAC 656
GYM+ +L LKYTWK+AG+ +RKRI + K Q QY PCGCQ C
Sbjct: 599 GYME-QDLVARTRICRRKGRARKLKYTWKSAGHPTVRKRIGDGK-QWYTQYNPCGCQQMC 656
Query: 657 GKQCPCLTNGTCCEKYCGCPKMCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCW 716
GK C C+ NGTCCEKYCGC K CKNRFRGCHCAKSQCRSRQCPCFAA RECDPDVCRNCW
Sbjct: 657 GKDCACVENGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAASRECDPDVCRNCW 716
Query: 717 VGCGDGTLGVPNQRGDNYECRNMXXXXXXXXRVLLGRSDVSGWGAFLKNSVGKHEYLGEY 776
V CGDG+LG P RGD Y+C NM R+LLG+SDV+GWGAF+KN V +++YLGEY
Sbjct: 717 VSCGDGSLGEPLARGDGYQCGNMKLLLKQQQRILLGKSDVAGWGAFIKNPVNRNDYLGEY 776
Query: 777 TGELISHKEADKRGKIYDRENSSFLFNLNNEYVLDAYRMGDKLKFANHSPDPNCYAKVIM 836
TGELISH+EADKRGKIYDR NSSFLF+LN +YVLDAYR GDKLKFANHS +PNCYAKV++
Sbjct: 777 TGELISHREADKRGKIYDRANSSFLFDLNEQYVLDAYRKGDKLKFANHSSNPNCYAKVML 836
Query: 837 VAGDHRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPEGPGAKDDAQPSTGRAKKLA 895
VAGDHRVGI+AK+RI A EELFYDYRY PD+APAWAR+PEG KD+A S RA K+A
Sbjct: 837 VAGDHRVGIYAKDRIEASEELFYDYRYGPDQAPAWARRPEG-SKKDEASVSHHRAHKVA 894
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 165/303 (54%), Gaps = 18/303 (5%)
Query: 26 IDSLKKKITSDRFVYIQKRVEENSIKLSPITLHSHNLSKNRQTSTSNSTDLVSNLLTKRK 85
+ LK+++ S R I++RVE N L T +++ + ++ + N L++
Sbjct: 38 LAQLKRQVQSTRLAAIKERVEANRKALQVHTCALFDVAAAAEVASRGAEG--GNALSRGA 95
Query: 86 EDA---LCAVNSRESSPDESEGANCQDE--CSSTVIVGGNLSA----RNSVRPIRLPEVA 136
+ +S S P E E + Q+E + T+++ + + R V+ ++LP V
Sbjct: 96 AEGHRRFVGWDS-ASGPGERELVHVQEENLVAGTLVLSSSGGSGASHRTVVQLVKLPVVD 154
Query: 137 TLPPYTTWIFLDRNQRMQEDQSVLGRRRIYYDTNCGEALICXXXXXXXXXXXXXXXXXXX 196
+PPYTTWIFLD+NQRM +DQSV GRRRIYYD EALIC
Sbjct: 155 KIPPYTTWIFLDKNQRMADDQSV-GRRRIYYDPIVNEALICSESDDDVPEPEEEKHVFTE 213
Query: 197 XXXCIIRMTIQECGMSDAVLETLARDIERAPDDIKARYEILQGEKPEGSSKKVSELNVKM 256
+I Q+ G+S VL L + ++ P +I+ R E+L EK E S+ + ++++
Sbjct: 214 GEDQLIWKATQDHGLSREVLNVLCQFVDATPSEIEERSEVL-FEKYEKQSQSSYKTDLQL 272
Query: 257 EDVYGDKDLDAALDSFDNLFCRRCLVFDCKLHGCSQDLVFPTEKQAPLCSSDEGT-PCGI 315
+ DK +D ALDSFDNLFCRRCLVFDC+LHGCSQ+LVFP+EKQ DE PCG
Sbjct: 273 ---FLDKTMDVALDSFDNLFCRRCLVFDCRLHGCSQNLVFPSEKQPYGHELDENKRPCGD 329
Query: 316 HCY 318
CY
Sbjct: 330 QCY 332
>Os12g0613200 Similar to Histone-lysine N-methyltransferase, H3 lysine-4 specific
SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase
complex subunit SET1) (SET-domain-containing protein 1)
Length = 1212
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 748 RVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHKEADKRGKIYDREN--SSFLFNLN 805
R+ RS + WG S+ +++ EY GELI + +D R Y++ SS+LF L+
Sbjct: 1074 RLRFQRSKIHEWGLVALESIDAEDFVIEYVGELIRRQVSDIREDQYEKSGIGSSYLFRLD 1133
Query: 806 NEYVLDAYRMGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRY 863
++YV+DA + G +F NHS DPNCY KVI V G ++ I+AK RI AGEEL Y+Y++
Sbjct: 1134 DDYVVDATKRGGLARFINHSCDPNCYTKVITVEGQKKIVIYAKRRIYAGEELTYNYKF 1191
>Os09g0134500 Similar to Trithorax-like protein 1
Length = 1022
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 5/150 (3%)
Query: 748 RVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHKEADKRGK-IYDR--ENSSFLFNL 804
R+ G+S + G+G F K S + + EY GEL+ +D R + IY+ +++F +
Sbjct: 862 RLAFGKSRIHGFGVFAKVSHKAGDMMIEYIGELVRPPISDIRERRIYNSLVGAGTYMFRI 921
Query: 805 NNEYVLDAYRMGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRY- 863
++E V+DA R G NHS +PNCY++VI V GD + IFAK I+ EEL YDYR+
Sbjct: 922 DDERVIDATRAGSIAHLINHSCEPNCYSRVISVLGDEHIIIFAKRDINPWEELTYDYRFV 981
Query: 864 -EPDRAPAWARKPEGPGAKDDAQPSTGRAK 892
R P + P+ G +D + AK
Sbjct: 982 SSDQRLPCYCGFPKCRGVVNDVEAEGQSAK 1011
>Os01g0218800 Similar to Trithorax 5 (Fragment)
Length = 991
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 748 RVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHKEADKRGKIYDRENSS-FLFNLNN 806
RV GRS + GWG F + + + + EY G+ + AD R Y RE +LF ++
Sbjct: 850 RVSCGRSGIHGWGLFAAKKIQEGQMVIEYRGDQVRRSVADLREARYHREKKDCYLFKISE 909
Query: 807 EYVLDAYRMGDKLKFANHSPDPNCYAKVIMVAGDHR--VGIFAKERISAGEELFYDYRYE 864
+ V+DA G+ + NHS PNCYA+ IM GD + + + AK +SAGEEL YDY ++
Sbjct: 910 DVVVDATEKGNIARLINHSCMPNCYAR-IMSVGDEKSQIILIAKRDVSAGEELTYDYLFD 968
Query: 865 PDRA 868
PD +
Sbjct: 969 PDES 972
>Os04g0429100 Similar to SET domain-containing protein SET102
Length = 612
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 736 CRNMXXXXXXXXRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHKEADKRGKIYDR 795
C+N L +++ GWG ++ +++ EY GE+IS KEA +R + Y+
Sbjct: 169 CKNQRFQKSQYAATRLVKTEGRGWGLLADENIMAGQFVMEYCGEVISWKEAKRRSQAYEN 228
Query: 796 E--NSSFLFNLNNEYVLDAYRMGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISA 853
+ +++ LN + +DA + G +F NHS PNC + V G+ RVGIFAK+ I
Sbjct: 229 QGLTDAYIIYLNADESIDATKKGSLARFINHSCQPNCETRKWNVLGEVRVGIFAKQDIPI 288
Query: 854 GEELFYDYRYE 864
G EL YDY +E
Sbjct: 289 GTELSYDYNFE 299
>Os09g0556700 Nuclear protein SET domain containing protein
Length = 424
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 10/135 (7%)
Query: 749 VLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHKEADKR------GKIYDRENSSFLF 802
+++ +S + G G + + + + +Y GE++ ADKR GK +++ + F
Sbjct: 281 LVVYKSSIHGLGLYTSEFIPRGSMVVQYVGEIVGQCVADKREIEYQSGKRQQYKSACYFF 340
Query: 803 NLNNEYVLDAYRMGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYR 862
+ E+++DA R G +F NHS PNC AK+I V + +V FA+ I+ GEE+ YDY
Sbjct: 341 KIGKEHIIDATRKGGIARFINHSCQPNCVAKIISVRNEKKVVFFAERHINPGEEITYDYH 400
Query: 863 Y----EPDRAPAWAR 873
+ E R P + R
Sbjct: 401 FNREDEGQRIPCFCR 415
>Os02g0611300 Nuclear protein SET domain containing protein
Length = 263
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 758 GWGAFLKNSVGKHEYLGEYTGELISHKEADKRGKIYDR--ENSSFLFNLNNEYVLDAYRM 815
GWGA + K +++ EY GE+I+ ++R R + + ++ ++ ++ +DA
Sbjct: 33 GWGAISLEPLEKGDFIIEYVGEVINDATCEQRLWDMKRRGDKNFYMCEISKDFTIDATFK 92
Query: 816 GDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRY 863
G+ +F NHS DPNC + V G+ RVG+FA I GE L YDYR+
Sbjct: 93 GNTSRFLNHSCDPNCKLEKWQVDGETRVGVFASRSIQVGEHLTYDYRF 140
>Os08g0442500
Length = 523
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 750 LLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHKEADKRGKIYDR--ENSSFLFNLNNE 807
+L ++ GWG+ ++ K +++ E+ GE+I + ++R + R + + ++ + +
Sbjct: 378 ILLQTQYCGWGSRALEAIEKDDFVIEFVGEVIDDETCEERLEDMRRRGDKNFYMCKVKKD 437
Query: 808 YVLDAYRMGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYE 864
+V+DA G+ +F NHS +PNC + V G R+G+FA + I GE L YDYR+E
Sbjct: 438 FVIDATFKGNDCRFFNHSCEPNCQLQKWQVNGKTRLGVFASKAIEVGEPLTYDYRFE 494
>Os02g0554000 Zinc finger, CW-type domain containing protein
Length = 637
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 758 GWGAFLKNSVGKHEYLGEYTGELISHKEADKRGKIYDRENSS--FLFNLNNEYVLDAYRM 815
G+G LK V + +L EY GE++ + R + Y + + LN V+DA
Sbjct: 206 GYGLQLKEDVSEGRFLIEYVGEVLDITAYESRQRYYASKGQKHFYFMALNGGEVIDACTK 265
Query: 816 GDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRY 863
G+ +F NHS PNC + MV G+ +GIFA I GEEL +DY Y
Sbjct: 266 GNLGRFINHSCSPNCRTEKWMVNGEVCIGIFAMRNIKKGEELTFDYNY 313
>Os09g0307800 Nuclear protein SET domain containing protein
Length = 340
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 735 ECRNMXXXXXXXXRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHKEADKRGKIYD 794
+C N + L +++ G G + + K E++ EY GE+I + ++R
Sbjct: 96 KCANKPFQHRTLRKTKLIKTEKCGNGVVAEEDIKKGEFVIEYVGEVIDDRTCEQRLWKMK 155
Query: 795 RENSS--FLFNLNNEYVLDAYRMGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERIS 852
R+ + +L +++ V+DA G+ +F NHS +PN + V G+ RVGIFA I
Sbjct: 156 RQGDTNFYLCEVSSNMVIDATNKGNMSRFINHSCEPNTEMQKWTVEGETRVGIFALRDIK 215
Query: 853 AGEELFYDYRY 863
GEEL YDY++
Sbjct: 216 TGEELTYDYKF 226
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.133 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 29,291,590
Number of extensions: 1221046
Number of successful extensions: 3179
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 3157
Number of HSP's successfully gapped: 12
Length of query: 896
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 786
Effective length of database: 11,292,261
Effective search space: 8875717146
Effective search space used: 8875717146
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 161 (66.6 bits)