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Os09g0307800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Nuclear protein SET domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0154) R2 : 0.0339
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.13 (0.0325) R2dN8 : 0.0438 R2N8 : 0.0339
σ : 0.291
deviance : 38.75
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.21 0.177 10.8 0.658 0.483 0.483 0.228 -0.21 0.161 18.6 1007 391 -- --
14.27 0.176 10.8 0.649 0.483 0.49 0.232 -- 0.157 18.6 1007 380 -- --
14.32 0.176 10.8 0.653 0.489 0.479 -- -0.226 0.163 18.5 1007 376 -- --
14.39 0.177 10.8 0.646 0.485 0.49 -- -- 0.162 18.5 1007 370 -- --
25.4 0.235 10.8 0.664 -- 0.481 -- -0.12 0.124 -- 1006 1031 -- --
17.53 0.196 10.8 0.62 0.47 -- 0.173 -- 0.207 18.3 -- -- -- --
17.59 0.196 10.8 0.618 0.471 -- -- -- 0.208 18.1 -- -- -- --
25.42 0.235 10.8 0.659 -- 0.491 -- -- 0.122 -- 1006 1035 -- --
25.21 0.234 10.9 -- 0.479 0.428 -- -- 0.0923 18.4 1007 256 -- --
29.1 0.252 10.8 0.605 -- -- -- -- 0.197 -- -- -- -- --
27.67 0.246 10.8 -- 0.462 -- -- -- 0.139 18.2 -- -- -- --
36.57 0.282 10.8 -- -- 0.362 -- -- 0.0653 -- 1006 899 -- --
38.75 0.291 10.8 -- -- -- -- -- 0.13 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 13.05 atmosphere 995.0 30 > th dose dependent rect. 8 19
3 13.13 atmosphere 995.0 270 > th dose dependent rect. 6 19
6 13.25 atmosphere 995.0 270 > th dose dependent rect. 6 9
9 13.28 wind 9.0 270 < th dose dependent rect. 14 11
13 13.32 wind 5.0 270 < th dose independent rect. 14 11
17 13.35 atmosphere 995.0 10 > th dose dependent rect. 8 8
18 13.38 atmosphere 1010.0 720 < th dose independent rect. 18 12
22 13.39 atmosphere 1010.0 270 < th dose independent rect. 10 21
34 13.46 atmosphere 995.0 30 > th dose dependent rect. 8 11
55 13.55 atmosphere 1000.0 270 > th dose independent rect. 7 17
60 13.57 atmosphere 1010.0 720 < th dose independent rect. 11 19
75 13.60 radiation 40.0 90 < th dose dependent rect. 8 19
79 13.61 atmosphere 1000.0 10 > th dose independent rect. 8 19
87 13.64 humidity 50.0 270 > th dose dependent rect. 6 9
93 13.66 radiation 40.0 270 < th dose independent rect. 8 17
98 13.67 atmosphere 1010.0 270 < th dose independent rect. 10 11
99 13.67 atmosphere 1010.0 720 < th dose independent rect. 9 13
100 13.67 atmosphere 1010.0 90 < th dose independent rect. 19 13
132 13.73 atmosphere 1015.0 270 < th dose dependent rect. 1 14
133 13.73 atmosphere 995.0 270 > th dose dependent rect. 21 15
138 13.75 atmosphere 1010.0 720 < th dose independent rect. 18 4
142 13.75 atmosphere 1015.0 270 < th dose dependent rect. 10 21
143 13.76 atmosphere 1000.0 270 > th dose independent rect. 6 9
155 13.78 temperature 30.0 270 < th dose independent rect. 6 7
158 13.79 atmosphere 1010.0 720 < th dose independent sin 14 NA
178 13.81 precipitation 0.1 270 < th dose independent rect. 24 7
185 13.81 precipitation 0.1 270 < th dose dependent rect. 24 7
195 13.82 temperature 30.0 90 < th dose dependent rect. 8 7
198 13.82 atmosphere 1015.0 270 < th dose dependent rect. 11 19
202 13.83 wind 9.0 270 < th dose independent rect. 7 17
213 13.84 atmosphere 1010.0 720 < th dose independent rect. 19 2
215 13.84 atmosphere 1000.0 270 > th dose independent rect. 6 7
216 13.84 temperature 30.0 270 < th dose independent rect. 6 9
217 13.84 precipitation 0.1 270 < th dose independent rect. 7 17
220 13.84 precipitation 0.1 270 < th dose dependent rect. 7 17
222 13.85 wind 9.0 270 < th dose independent rect. 24 7
223 13.85 temperature 10.0 270 > th dose independent rect. 24 7
225 13.85 temperature 30.0 270 < th dose independent rect. 24 7
226 13.85 humidity 50.0 270 > th dose independent rect. 24 7
228 13.85 atmosphere 995.0 270 > th dose independent rect. 24 7
229 13.85 atmosphere 1015.0 270 < th dose independent rect. 24 7
230 13.85 radiation 30.0 270 < th dose independent rect. 24 7
235 13.85 temperature 10.0 270 > th dose independent rect. 7 17
242 13.85 atmosphere 1015.0 90 < th dose dependent rect. 3 14
254 13.86 atmosphere 995.0 270 > th dose dependent rect. 8 1
257 13.86 atmosphere 995.0 10 > th dose dependent rect. 23 14
278 13.88 atmosphere 1000.0 10 > th dose independent rect. 8 17
281 13.88 temperature 30.0 270 < th dose dependent rect. 6 9
303 13.89 atmosphere 1015.0 270 < th dose dependent rect. 1 20
310 13.90 atmosphere 1015.0 720 < th dose independent rect. 18 20
319 13.91 atmosphere 1010.0 270 < th dose independent sin 9 NA
400 13.95 radiation 40.0 270 < th dose dependent rect. 24 7
415 13.97 atmosphere 1000.0 10 > th dose independent rect. 8 7
418 13.97 temperature 15.0 270 > th dose independent rect. 15 15
421 13.97 temperature 15.0 270 > th dose independent rect. 12 18
425 13.97 atmosphere 995.0 720 > th dose dependent rect. 6 3
442 13.98 atmosphere 1015.0 90 < th dose dependent rect. 3 18
443 13.98 humidity 70.0 90 > th dose dependent rect. 8 19
446 13.99 temperature 30.0 90 < th dose independent rect. 8 7
454 13.99 atmosphere 1015.0 270 < th dose dependent rect. 1 6
481 14.00 temperature 30.0 90 < th dose dependent rect. 8 19
482 14.00 atmosphere 1015.0 90 < th dose dependent rect. 3 20
495 14.01 atmosphere 1015.0 720 < th dose dependent rect. 18 11
524 14.03 atmosphere 995.0 720 > th dose dependent rect. 22 19
555 14.05 atmosphere 1010.0 720 < th dose independent sin 20 NA
592 14.06 atmosphere 1015.0 720 < th dose dependent rect. 3 2
610 14.07 humidity 50.0 270 > th dose independent rect. 15 15
661 14.10 temperature 15.0 10 > th dose independent rect. 15 17
690 14.12 wind 1.0 270 > th dose independent rect. 7 17
694 14.12 temperature 15.0 720 > th dose independent rect. 18 20
742 14.14 temperature 15.0 270 > th dose independent rect. 1 14
761 14.15 humidity 50.0 270 > th dose independent rect. 13 17
779 14.15 atmosphere 1005.0 270 > th dose dependent rect. 20 19
784 14.16 atmosphere 1000.0 30 > th dose independent rect. 8 11
791 14.16 atmosphere 995.0 270 > th dose dependent sin 22 NA
850 14.18 atmosphere 1015.0 270 < th dose dependent rect. 15 15
873 14.19 precipitation 0.1 30 < th dose independent rect. 8 19
884 14.19 precipitation 0.1 30 < th dose dependent rect. 8 19
887 14.20 humidity 50.0 43200 > th dose independent rect. 24 4
888 14.20 wind 7.0 10 < th dose independent rect. 3 5
891 14.20 precipitation 0.1 10 < th dose independent rect. 3 5
907 14.20 precipitation 0.1 10 < th dose dependent rect. 3 5
918 14.21 temperature 10.0 10 > th dose independent rect. 3 5
920 14.21 temperature 30.0 10 < th dose independent rect. 3 5
922 14.21 humidity 50.0 10 > th dose independent rect. 3 5
924 14.21 atmosphere 995.0 10 > th dose independent rect. 3 5
925 14.21 atmosphere 1015.0 10 < th dose independent rect. 3 5
926 14.21 atmosphere 1010.0 720 < th dose independent rect. 10 5
931 14.21 temperature 10.0 10 > th dose independent rect. 8 19
964 14.22 temperature 30.0 270 < th dose dependent rect. 8 2
998 14.23 wind 9.0 270 < th dose dependent rect. 1 6