Os03g0307800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : SET domain-containing protein.
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Os03g0307800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : SET domain-containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.03 | 0.301 | 8.92 | -1.33 | 0.215 | 0.995 | -0.456 | 0.458 | -0.064 | 9.92 | 9.956 | 1211 | -- | -- |
| 41.17 | 0.299 | 8.93 | -1.43 | 0.227 | 1.01 | -0.505 | -- | -0.0918 | 10 | 10.04 | 1176 | -- | -- |
| 41.45 | 0.3 | 8.91 | -1.31 | 0.27 | 1.01 | -- | 0.705 | -0.0568 | 8.87 | 4.821 | 1108 | -- | -- |
| 41.82 | 0.301 | 8.93 | -1.45 | 0.261 | 1 | -- | -- | -0.0901 | 8.87 | 11.47 | 1142 | -- | -- |
| 44.11 | 0.309 | 8.92 | -1.34 | -- | 0.952 | -- | 0.484 | -0.0588 | -- | 4.42 | 1344 | -- | -- |
| 56.89 | 0.354 | 8.89 | -1.14 | 0.143 | -- | 0.823 | -- | 0.0892 | 3.95 | -- | -- | -- | -- |
| 57.55 | 0.355 | 8.89 | -1.15 | 0.219 | -- | -- | -- | 0.0842 | 6.78 | -- | -- | -- | -- |
| 44.3 | 0.31 | 8.93 | -1.45 | -- | 0.956 | -- | -- | -0.0873 | -- | -22.15 | 1358 | -- | -- |
| 88.45 | 0.438 | 8.88 | -- | 0.21 | 0.336 | -- | -- | 0.145 | 7.94 | 21.85 | 1175 | -- | -- |
| 60.05 | 0.362 | 8.89 | -1.15 | -- | -- | -- | -- | 0.0885 | -- | -- | -- | -- | -- |
| 92.53 | 0.45 | 8.86 | -- | 0.206 | -- | -- | -- | 0.213 | 7.12 | -- | -- | -- | -- |
| 90.74 | 0.444 | 8.88 | -- | -- | 0.326 | -- | -- | 0.155 | -- | 21.9 | 1297 | -- | -- |
| 94.77 | 0.454 | 8.87 | -- | -- | -- | -- | -- | 0.216 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.89 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 64 | 40.50 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 82 | 40.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 83 | 40.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 84 | 40.72 | temperature | 15 | 720 | > th | dose dependent | sin | 14 | NA |
| 179 | 41.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 13 |
| 228 | 41.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 356 | 41.38 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 379 | 41.42 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 405 | 41.44 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 480 | 41.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 482 | 41.55 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 494 | 41.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 509 | 41.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 529 | 41.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 610 | 41.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 641 | 41.71 | temperature | 15 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 665 | 41.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 667 | 41.74 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 702 | 41.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 796 | 41.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 813 | 41.86 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 909 | 41.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 979 | 41.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 991 | 42.00 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 1 |