Os06g0275500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Polycomb protein EZ1 (Enhancer of zeste protein 1).
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Os06g0275500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Polycomb protein EZ1 (Enhancer of zeste protein 1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.75 | 0.44 | 9.35 | -0.413 | 0.555 | -1.23 | 0.129 | 2.73 | 0.216 | 23.3 | 23.61 | 1505 | -- | -- |
| 93.18 | 0.45 | 9.43 | -1.17 | 0.752 | -1.08 | 0.418 | -- | 0.0512 | 23.5 | 23.24 | 1187 | -- | -- |
| 87.81 | 0.436 | 9.35 | -0.424 | 0.557 | -1.23 | -- | 2.71 | 0.219 | 23.4 | 23.5 | 1494 | -- | -- |
| 91.99 | 0.447 | 9.44 | -1.24 | 0.574 | -0.991 | -- | -- | 0.00909 | 23.6 | 22.92 | 1434 | -- | -- |
| 106.73 | 0.481 | 9.33 | -0.42 | -- | -1.21 | -- | 2.73 | 0.221 | -- | 23.43 | 1545 | -- | -- |
| 129.68 | 0.534 | 9.49 | -1.59 | 0.512 | -- | 0.109 | -- | -0.202 | 23.2 | -- | -- | -- | -- |
| 129.73 | 0.533 | 9.49 | -1.6 | 0.512 | -- | -- | -- | -0.202 | 23.2 | -- | -- | -- | -- |
| 110.67 | 0.49 | 9.43 | -1.17 | -- | -0.981 | -- | -- | -0.00187 | -- | 23.1 | 5980 | -- | -- |
| 112.65 | 0.494 | 9.37 | -- | 0.587 | -1.94 | -- | -- | 0.34 | 23.1 | 12.44 | 6500 | -- | -- |
| 146.1 | 0.565 | 9.48 | -1.59 | -- | -- | -- | -- | -0.198 | -- | -- | -- | -- | -- |
| 197.15 | 0.657 | 9.45 | -- | 0.497 | -- | -- | -- | -0.0242 | 23 | -- | -- | -- | -- |
| 130.18 | 0.531 | 9.33 | -- | -- | -1.86 | -- | -- | 0.427 | -- | 12.69 | 8837 | -- | -- |
| 212.53 | 0.68 | 9.44 | -- | -- | -- | -- | -- | -0.0218 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.09 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 4 |
| 2 | 86.10 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 45 | 87.72 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |
| 51 | 87.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 14 |
| 72 | 87.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 20 |
| 107 | 88.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 19 |
| 259 | 89.01 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 325 | 89.79 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 328 | 89.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 512 | 91.48 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 7 |
| 519 | 91.54 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 9 |
| 564 | 91.78 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 594 | 91.97 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 9 |
| 595 | 91.97 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 19 |
| 599 | 91.98 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 17 |
| 612 | 92.05 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 662 | 92.24 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 667 | 92.26 | radiation | 1 | 1440 | < th | dose dependent | sin | 22 | NA |
| 809 | 92.66 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 813 | 92.67 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 14 |
| 831 | 92.72 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 17 |
| 832 | 92.72 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 840 | 92.75 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 901 | 92.91 | temperature | 25 | 1440 | > th | dose independent | sin | 18 | NA |
| 912 | 92.95 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 947 | 93.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 991 | 93.14 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 8 |