BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0541100 Os05g0541100|AK107193
(408 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0541100 IQ calmodulin-binding region domain containing... 620 e-178
Os01g0708700 IQ calmodulin-binding region domain containing... 323 2e-88
Os01g0194200 IQ calmodulin-binding region domain containing... 153 2e-37
Os03g0648300 IQ calmodulin-binding region domain containing... 108 6e-24
Os03g0787200 IQ calmodulin-binding region domain containing... 107 1e-23
Os12g0619000 IQ calmodulin-binding region domain containing... 103 3e-22
Os05g0123200 IQ calmodulin-binding region domain containing... 84 1e-16
Os01g0833800 IQ calmodulin-binding region domain containing... 79 8e-15
>Os05g0541100 IQ calmodulin-binding region domain containing protein
Length = 408
Score = 620 bits (1598), Expect = e-178, Method: Compositional matrix adjust.
Identities = 315/408 (77%), Positives = 315/408 (77%)
Query: 1 MGASGKWIKSLVSLKAAPEGTTKGRRWTRLWRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
MGASGKWIKSLVSLKAAPEGTTKGRRWTRLWR
Sbjct: 1 MGASGKWIKSLVSLKAAPEGTTKGRRWTRLWRSSSSASASASTAGDASESASSEADAFSS 60
Query: 61 XXXXXXXXPPRDFRVIRQEWXXXXXXXXXXXXXXXXXXXXXXGIVRLQALVRGRLVRRQL 120
PPRDFRVIRQEW GIVRLQALVRGRLVRRQL
Sbjct: 61 VVAAVVRAPPRDFRVIRQEWAAVRVQAAFRAFLARRALKALRGIVRLQALVRGRLVRRQL 120
Query: 121 AVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRADPIKQAEEQWCDSQGSVS 180
AVTLKCMNALLRVQ CSADGRDSQDAVGERDGRADPIKQAEEQWCDSQGSVS
Sbjct: 121 AVTLKCMNALLRVQERARERRARCSADGRDSQDAVGERDGRADPIKQAEEQWCDSQGSVS 180
Query: 181 EVRSKIHMRHDAVAKRERAIAYALSHXXXXXXXXXXXXXXXXXLRNHESNRCNHDWSYIE 240
EVRSKIHMRHDAVAKRERAIAYALSH LRNHESNRCNHDWSYIE
Sbjct: 181 EVRSKIHMRHDAVAKRERAIAYALSHQPRSSKQSARPSSPARSLRNHESNRCNHDWSYIE 240
Query: 241 GWMATKPWESRLMEQSHAELKCSKNSGELNLAGAQLSNASSVKMRGNRVAAKPPSVLSAS 300
GWMATKPWESRLMEQSHAELKCSKNSGELNLAGAQLSNASSVKMRGNRVAAKPPSVLSAS
Sbjct: 241 GWMATKPWESRLMEQSHAELKCSKNSGELNLAGAQLSNASSVKMRGNRVAAKPPSVLSAS 300
Query: 301 SSDFPCDVXXXXXXXXXPARSDGGHGEGPSYMSLTKSAKARQSCNSPFQIQRQRSGGMSS 360
SSDFPCDV PARSDGGHGEGPSYMSLTKSAKARQSCNSPFQIQRQRSGGMSS
Sbjct: 301 SSDFPCDVSSASTSSATPARSDGGHGEGPSYMSLTKSAKARQSCNSPFQIQRQRSGGMSS 360
Query: 361 YKRVALSPLDVQSNACSEFSVTSRKLNSLSLKGRSMTRSLDKENDNLF 408
YKRVALSPLDVQSNACSEFSVTSRKLNSLSLKGRSMTRSLDKENDNLF
Sbjct: 361 YKRVALSPLDVQSNACSEFSVTSRKLNSLSLKGRSMTRSLDKENDNLF 408
>Os01g0708700 IQ calmodulin-binding region domain containing protein
Length = 441
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/360 (52%), Positives = 226/360 (62%), Gaps = 25/360 (6%)
Query: 69 PPRDFRVIRQEWXXXXXXXXXXXXXXXXXXXXXXGIVRLQALVRGRLVRRQLAVTLKCMN 128
PPRDFR+IRQEW GIVRLQALVRGR VR+QLAVTLKCM
Sbjct: 77 PPRDFRLIRQEWAAVRIQTAFRAFLARRALRALRGIVRLQALVRGRRVRKQLAVTLKCMQ 136
Query: 129 ALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRADPIKQAEEQWCDSQGSVSEVRSKIHM 188
AL+RVQ SADG DSQD + ER GR D +K+AE WCDSQG+ +VRSKIHM
Sbjct: 137 ALVRVQARARDRRARISADGLDSQDMLDERGGRVDHVKEAEAGWCDSQGTADDVRSKIHM 196
Query: 189 RHDAVAKRERAIAYALSHXXXXXXXXXXXXXXXXXLRNH--ESNRCNHDWSYIEGWMATK 246
RH+ KRERA YA SH L++H + R NH WSY+EGWMATK
Sbjct: 197 RHEGAIKRERARTYAQSH-QRCSNHGGRPSSPAVSLKHHGNGATRSNHSWSYLEGWMATK 255
Query: 247 PWESRLMEQSHAE----LKCSKNSGELNLAGAQLSNASSVKMRGN----RVAAKPPSVLS 298
PWESRLMEQ+H E +CS++ E+++ G +LS+ASSVK+R N RVAAKPPS++S
Sbjct: 256 PWESRLMEQTHTENSTNSRCSESVEEVSVGGPKLSDASSVKIRRNNVTTRVAAKPPSMIS 315
Query: 299 ASSSDFPCD----------VXXXXXXXXXPARSDGGHGEGPSYMSLTKSAKARQSCNSPF 348
A+SSDF CD RSD G GPSYMSLTKSAKAR S
Sbjct: 316 ATSSDFVCDESSPSTSSVTPLSANNSLATERRSDCGQVGGPSYMSLTKSAKARLSGYGSH 375
Query: 349 Q--IQRQRSGGMSSY-KRVALSPLDVQSNACSEFSVTSRKLNSLSLKGRSMTRSLDKEND 405
+ +QRQRSG + + R+A S +DVQS A SE SVTS++LNSL+LKGR+ TRSLDKEN+
Sbjct: 376 KPPLQRQRSGDLLHHNNRMAFSSIDVQSTAGSEVSVTSKRLNSLALKGRA-TRSLDKENE 434
>Os01g0194200 IQ calmodulin-binding region domain containing protein
Length = 442
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 161/343 (46%), Gaps = 46/343 (13%)
Query: 71 RDFRVIRQEWXXXXXXXXXXXXXXXXXXXXXXGIVRLQALVRGRLVRRQLAVTLKCMNAL 130
+DF +RQEW G+VRLQA+VRGR VR+Q AVTL+CM AL
Sbjct: 101 KDFMAVRQEWAAIRVQTAFRGFLARRALRALKGLVRLQAIVRGRQVRKQAAVTLRCMQAL 160
Query: 131 LRVQXXXXXXXXXCSADGRDSQDAVGERDGRADPIKQAEEQWCDSQGSVSEVRSKIHMRH 190
+RVQ S +G+ Q + R + D +++AEE WCDSQG++ +VR K+ R
Sbjct: 161 VRVQARIRARRVRMSTEGQAVQKLLEARRTKLDILREAEEGWCDSQGTLEDVRVKLQKRQ 220
Query: 191 DAVAKRERAIAYALSHXXXXXXXXXXX---------XXXXXXLRNHESNRCNHDWSYIEG 241
+ KRERAIAYA S L++ ++ N +WS++E
Sbjct: 221 EGAIKRERAIAYAYSQQIEGATKCNQQPKPTSYGRLNQSGMLLKHQHFDKSNGNWSWLER 280
Query: 242 WMATKPWESRLMEQ------SHAELKCSKNSGELNLAGAQLSNASSVKMRGN----RVAA 291
WMA +PWE+RLME+ S +L SKN + S +SVK+R N RV A
Sbjct: 281 WMAARPWENRLMEEHNQTNSSSPDLLSSKNCEDSFGILGDFSEPNSVKVRKNNVSKRVCA 340
Query: 292 KPPSV----------LSASSSDFPCD------------VXXXXXXXXXPARSDGGHGEGP 329
KPP V +S+ S++ D +++ P
Sbjct: 341 KPPVVSHHQRIKAQSISSLSTELHNDESSASSSSCFASTPISFSTFVTTEKTEDSIRARP 400
Query: 330 SYMSLTKSAKA-RQSCNSPFQIQRQRSGGMSSYKRVALSPLDV 371
+YM++T+S KA R++CN+ QR +G + ++ + L V
Sbjct: 401 NYMNMTESIKAKRKACNA----QRTTAGKLMEDRKASGVELKV 439
>Os03g0648300 IQ calmodulin-binding region domain containing protein
Length = 502
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 92/157 (58%), Gaps = 4/157 (2%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRA 162
GIV LQALVRG ++R+Q + TL+CM AL+R Q S + + ++ V E+D
Sbjct: 191 GIVILQALVRGHIIRKQTSETLQCMQALVRAQARVRARQVRVSLENQVARKKVPEQDDHE 250
Query: 163 DPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSHXXXXXXXXXXXXXXXX 222
+ +++ EE+WC S GSV E+++K+ R +A AKRERA+AYAL+H
Sbjct: 251 NHVREIEERWCGSIGSVEELQAKVLKRQEAAAKRERAMAYALTHQRQAGSRQQKPTTP-- 308
Query: 223 XLRNHESNRCNHDWSYIEGWMATKPWESRLMEQSHAE 259
+ E + + +++E WMA +PWE+RL++ + E
Sbjct: 309 --QGLELDDSHWGSNWLERWMAVRPWENRLLDSNTKE 343
>Os03g0787200 IQ calmodulin-binding region domain containing protein
Length = 422
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%), Gaps = 8/151 (5%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRA 162
G+VRLQALVRG +VR+Q A+TL+CM AL+RVQ + + + Q A+ +
Sbjct: 124 GLVRLQALVRGHIVRKQAAITLRCMQALVRVQARVRARRVRIALESQTDQQAILQEKINE 183
Query: 163 DPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSHXXXXXXXXXXXXXXXX 222
+++ E+ WCDS GSV ++++K+ R +A AKRERA+AYAL+H
Sbjct: 184 THVREIEDGWCDSIGSVEDIQAKLLKRQEAAAKRERAMAYALTH--------QWQARQHA 235
Query: 223 XLRNHESNRCNHDWSYIEGWMATKPWESRLM 253
+ + ++ + W+++E WMA +PWESR +
Sbjct: 236 AITAFQPDKNSWGWNWLERWMAVRPWESRFL 266
>Os12g0619000 IQ calmodulin-binding region domain containing protein
Length = 442
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 4/157 (2%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRA 162
G+VRLQALVRG VR+Q A TL+CM AL+R Q S + + +Q E++
Sbjct: 117 GLVRLQALVRGHAVRKQAAETLQCMQALVRAQARVRARRVRISLESQVTQKKASEQNVHE 176
Query: 163 DPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSHXXXXXXXXXXXXXXXX 222
D + + EE+WCD GS ++++K+ R +A AKRERA+AYAL+H
Sbjct: 177 DHVWEIEERWCDGIGSAEQMQAKVLKRQEAAAKRERAMAYALTH----QWQAGSRKQKAA 232
Query: 223 XLRNHESNRCNHDWSYIEGWMATKPWESRLMEQSHAE 259
L+ E + +++E WMA +PWE+RL++ + E
Sbjct: 233 TLQGLEVDENQWSQNWLERWMAARPWENRLLDTNAKE 269
>Os05g0123200 IQ calmodulin-binding region domain containing protein
Length = 304
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRA 162
G+VRL++LV G V+RQ A TL+CM L RVQ S + + Q + +
Sbjct: 131 GLVRLKSLVEGNSVKRQAASTLRCMQTLARVQSQIRSRRLKMSEENQALQRQLLLKQ-EL 189
Query: 163 DPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSHXXXXXXXXXXXXXXXX 222
+ ++ EQW DS S ++ + + R +A +RERA+AYA SH
Sbjct: 190 ESLRMG-EQWDDSTQSKEQIEASLISRQEAAVRRERALAYAFSHQWKSTSRSVNPMFV-- 246
Query: 223 XLRNHESNRCNHDWSYIEGWMATKPWESRLMEQSHAEL-KCSKNSGELNLAGAQLSNA 279
+ N WS++E WMA KPWE R + L + S S LNL +++ A
Sbjct: 247 -----DPNNPQWGWSWLERWMAAKPWEGRAGTDKESNLDRASAKSASLNLGEGEITKA 299
>Os01g0833800 IQ calmodulin-binding region domain containing protein
Length = 500
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 8/200 (4%)
Query: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQXXXXXXXXXCSADGRDSQDAVGERDGRA 162
G+VRL++LV G V+RQ A TL C + RVQ + + Q + + R
Sbjct: 166 GLVRLKSLVDGNAVKRQTAHTLHCTQTMTRVQTQIYSRRVKMEEEKQALQRQLQLKHQRE 225
Query: 163 DPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSHXXXXXXXXXXXXXXXX 222
+ +E W S S +V + + M+ +A +RERA+AYA SH
Sbjct: 226 LEKMKIDEDWDHSHQSKEQVETSLMMKQEAALRRERALAYAFSHQWKNSGRTITPTFT-- 283
Query: 223 XLRNHESNRCNHDWSYIEGWMATKPWESRLMEQSHAELKCSKNSGELNLAGAQLSNASSV 282
+ N WS++E WM ++PWESR++ + S + + + + A S+
Sbjct: 284 -----DQGNPNWGWSWMERWMTSRPWESRVISDKDPKDHYSTKNPSTSASRTYVPRAISI 338
Query: 283 KMRGN-RVAAKPPSVLSASS 301
+ +++PPS S S+
Sbjct: 339 QRPATPNKSSRPPSRQSPST 358
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.127 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,491,149
Number of extensions: 338790
Number of successful extensions: 1050
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1032
Number of HSP's successfully gapped: 8
Length of query: 408
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 305
Effective length of database: 11,657,759
Effective search space: 3555616495
Effective search space used: 3555616495
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)