BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0531500 Os05g0531500|AK120867
(575 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0531500 Protein of unknown function DUF616 family protein 997 0.0
Os06g0724300 Protein of unknown function DUF616 family protein 268 6e-72
Os11g0198100 Protein of unknown function DUF616 family protein 219 4e-57
Os01g0210400 Protein of unknown function DUF616 family protein 190 3e-48
Os01g0749100 Protein of unknown function DUF616 family protein 159 8e-39
Os01g0304300 Protein of unknown function DUF616 family protein 131 1e-30
Os02g0745800 Protein of unknown function DUF616 family protein 84 4e-16
>Os05g0531500 Protein of unknown function DUF616 family protein
Length = 575
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/575 (85%), Positives = 489/575 (85%)
Query: 1 MSGSAATLGMRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQXXXXXXXXXXXXXXXX 60
MSGSAATLGMRC LQ
Sbjct: 1 MSGSAATLGMRCGSYGSLASAGGGRKGGGRGWGWRGGGEKERLQLLHRALRLVGRRRAGV 60
Query: 61 XXXXXXXXXXXFCSIFAVVKDDNASMIIANNYEVANTIQNSVYPSMTRPLMTSSDQFSAS 120
FCSIFAVVKDDNASMIIANNYEVANTIQNSVYPSMTRPLMTSSDQFSAS
Sbjct: 61 LLLLAAASAAVFCSIFAVVKDDNASMIIANNYEVANTIQNSVYPSMTRPLMTSSDQFSAS 120
Query: 121 SVNKTELPNRLRLSFANFTHHPCEGFSVAPPLVDPKRTGPRPCDVCYVPVDQAFALMPPQ 180
SVNKTELPNRLRLSFANFTHHPCEGFSVAPPLVDPKRTGPRPCDVCYVPVDQAFALMPPQ
Sbjct: 121 SVNKTELPNRLRLSFANFTHHPCEGFSVAPPLVDPKRTGPRPCDVCYVPVDQAFALMPPQ 180
Query: 181 PSPSPVLKNLSYVFEDNITANFSNQGSVFGGHPSLEQRNKSFDISESMTVHCGFVRGKKP 240
PSPSPVLKNLSYVFEDNITANFSNQGSVFGGHPSLEQRNKSFDISESMTVHCGFVRGKKP
Sbjct: 181 PSPSPVLKNLSYVFEDNITANFSNQGSVFGGHPSLEQRNKSFDISESMTVHCGFVRGKKP 240
Query: 241 GQGSGFDINDDDLLEMEKCRELVVASAIFGNYDMIQHPRNASEFSKANACFYMFVDEETE 300
GQGSGFDINDDDLLEMEKCRELVVASAIFGNYDMIQHPRNASEFSKANACFYMFVDEETE
Sbjct: 241 GQGSGFDINDDDLLEMEKCRELVVASAIFGNYDMIQHPRNASEFSKANACFYMFVDEETE 300
Query: 301 AYVKNSSSLYRNNKVGLWRLVVVRNLPYEDPRRTGKIPKLLLHRLFPNVRFSVWIDAKLK 360
AYVKNSSSLYRNNKVGLWRLVVVRNLPYEDPRRTGKIPKLLLHRLFPNVRFSVWIDAKLK
Sbjct: 301 AYVKNSSSLYRNNKVGLWRLVVVRNLPYEDPRRTGKIPKLLLHRLFPNVRFSVWIDAKLK 360
Query: 361 LVVDPYLLLERFLWRKNATFAISRHYKRFDVFEEAEANKAAGKYDNASIDYQIEFYRNEG 420
LVVDPYLLLERFLWRKNATFAISRHYKRFDVFEEAEANKAAGKYDNASIDYQIEFYRNEG
Sbjct: 361 LVVDPYLLLERFLWRKNATFAISRHYKRFDVFEEAEANKAAGKYDNASIDYQIEFYRNEG 420
Query: 421 LTYYTPAKLPITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQISFSTVRDKIRA 480
LTYYTPAKLPITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQISFSTVRDKIRA
Sbjct: 421 LTYYTPAKLPITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQISFSTVRDKIRA 480
Query: 481 RVGWMPEMFLDCERRNFVIQGYHRELLEQMIASGWKPPPTASEPSRKLRLGXXXXXXXXX 540
RVGWMPEMFLDCERRNFVIQGYHRELLEQMIASGWKPPPTASEPSRKLRLG
Sbjct: 481 RVGWMPEMFLDCERRNFVIQGYHRELLEQMIASGWKPPPTASEPSRKLRLGSRKAPPSKK 540
Query: 541 XXXXXXXXXXXXXXXXXXXXITRMTDTTTWQKLGA 575
ITRMTDTTTWQKLGA
Sbjct: 541 SSMKRKRVKKSSSRRRLPKPITRMTDTTTWQKLGA 575
>Os06g0724300 Protein of unknown function DUF616 family protein
Length = 468
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 222/359 (61%), Gaps = 19/359 (5%)
Query: 153 VDPKRTGPRPCDVCYVPV-DQAFALMPPQPSPSPVLKNLSYVFEDNITANFSNQGSVFGG 211
+D R+ +P C +PV D ++ P+ +P+ ++K LSY+ D + S +FGG
Sbjct: 72 LDSIRSSSKPLHRCPIPVADDPDSITIPKRTPNTIVKRLSYITVDKQDKDPS---PLFGG 128
Query: 212 HPSLEQRNKSFDISESMTVHCGFVRGKKPGQGSGFDINDDDLLEMEKCRELVVASAIFGN 271
S +QR SF ++ +M VHCGF++ SG D++D D+ ++KC+ VVAS IF
Sbjct: 129 RQSWKQREDSFKLNATMKVHCGFMKN------SGADMDDVDVKYIQKCK-FVVASGIFDG 181
Query: 272 YDMIQHPRNASEFSKANACFYMFVDEETEAYVKNSSSLYRNNK----VGLWRLVVVRNLP 327
YD+ P N S S+ CF M VDE + +++ ++++ + VG+WRL+ + LP
Sbjct: 182 YDIPHQPSNISIRSQKLFCFLMVVDEVSLDFIEKNTTVKFDKAGGKWVGIWRLITLHRLP 241
Query: 328 YEDPRRTGKIPKLLLHRLFPNVRFSVWIDAKLKLVVDPYLLLERFLWRKNATFAISRHYK 387
+++PRR GK+PK+L HRLFP +S+WID K++L+VDP L+LER+LWR TFA++ H
Sbjct: 242 FDEPRRNGKVPKILTHRLFPQAWYSIWIDGKMELIVDPLLILERYLWRGKYTFAVAVHKH 301
Query: 388 RFDVFEEAEANKAAGKYDNASIDYQIEFYRNEGLTYYTPAKLPITSDVPEGCVIIREHIP 447
++EE +A K +Y +D Q++ Y +EG+ + P K + SDVPEG V+IREH
Sbjct: 302 HKSIYEEGDAIKRRKRYARPLVDLQMKMYYHEGMEPWNPKKR-MPSDVPEGAVLIREHTT 360
Query: 448 ITNLFTCLWFNEVDRFTSRDQISFSTVRDKIRARVGWMPEMFLDCERRN-FVIQGYHRE 505
+++LF+CLWFNEV+ FT RDQ+SF V ++ + + MF +CE + F++ + RE
Sbjct: 361 MSDLFSCLWFNEVNLFTPRDQLSFGYVVYRLGDALKFF--MFPNCEYNSLFILHRHTRE 417
>Os11g0198100 Protein of unknown function DUF616 family protein
Length = 247
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/235 (48%), Positives = 151/235 (64%), Gaps = 18/235 (7%)
Query: 282 SEFSKANACFYMFVDE------ETEAYVKNSSSLYRNNKVGLWRLVVVRNLPYEDPRRTG 335
+ SK CF MF+DE E+E +SS +G+W++++++N+PY D RR G
Sbjct: 7 TSLSKKTVCFAMFLDEITLRTLESEGQKMDSSGF-----IGIWKIILIKNMPYNDMRRVG 61
Query: 336 KIPKLLLHRLFPNVRFSVWIDAKLKLVVDPYLLLERFLWRKNATFAISRHYKRFDVFEEA 395
KIPK L HRLFP+ RFS+W+D+KL+L DP L+LE FLWR +AIS HY R V+EE
Sbjct: 62 KIPKFLAHRLFPSSRFSIWLDSKLRLQNDPILILEYFLWRHGYEYAISNHYDRHCVWEEV 121
Query: 396 EANKAAGKYDNASIDYQIEFYRNEGLTYYTPA---KLPITSDVPEGCVIIREHIPITNLF 452
NK K+++ ID Q EFY+ +GLT + P+ KL + S VPEG I+REH P++NLF
Sbjct: 122 AQNKRLNKFNHTIIDQQFEFYQADGLTKFNPSDPNKL-LPSYVPEGSFIVREHTPMSNLF 180
Query: 453 TCLWFNEVDRFTSRDQISFSTVRDKIRARVGWMP---EMFLDCERRNFVIQGYHR 504
+CLWFNEVDRFT RDQ+SF+ K+R P MF DCERR+ +HR
Sbjct: 181 SCLWFNEVDRFTPRDQLSFAYTYLKLRRMNPEKPFRLNMFKDCERRSIAKLFHHR 235
>Os01g0210400 Protein of unknown function DUF616 family protein
Length = 499
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 167/298 (56%), Gaps = 25/298 (8%)
Query: 209 FGGHPSLEQRNKSFDISES-MTVHCGFVRGKKPGQGSG-------FDINDDDL----LEM 256
F G+ S +R F+ ++S + + CGF + + P + SG F I + L L M
Sbjct: 142 FAGNLSTVERRSFFNHTDSAVEIPCGFFK-EFPVRESGDFFGQFAFFIEEKILVAHRLAM 200
Query: 257 EKCRELVVASAIFGNYDMIQHPRNASEFSKANACFYMFVDEETEAYVKNSSSLY----RN 312
EKC +VVASAIF ++D I+ P+ + CF+MF+D+ T + + + L
Sbjct: 201 EKCNGVVVASAIFNDHDKIRQPKGLGSETLRTVCFFMFIDDATHRVLASHNILAGERGEA 260
Query: 313 NKVGLWRLVVV-------RNLPYEDPRRTGKIPKLLLHRLFPNVRFSVWIDAKLKLVVDP 365
+G WR+ + LPYE+P I K LLHRLFPN RFSVW+DAK++L VDP
Sbjct: 261 GTIGAWRVARLVAGAGGDHRLPYENPAMNCVIVKYLLHRLFPNARFSVWVDAKMQLTVDP 320
Query: 366 YLLLERFLWRKNATFAISRHYKRFDVFEEAEANKAAGKY-DNASIDYQIEFYRNEGLTYY 424
LL+ F+ K A A+S+H EEA A K+ D SI Q+E Y GL +
Sbjct: 321 LLLVHSFVAGKGADMAVSKHPFNLHTMEEAIATARWRKWGDVDSIREQMETYCRNGLQPW 380
Query: 425 TPAKLPITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQISFSTVRDKIRARV 482
+P KLP SDVP+ +IIR H ++LF+CL FNE++ F RDQ++F+ VRD++ +V
Sbjct: 381 SPIKLPYPSDVPDTAIIIRRHGLASDLFSCLLFNELEAFNPRDQLAFAYVRDQMSPKV 438
>Os01g0749100 Protein of unknown function DUF616 family protein
Length = 203
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 113/186 (60%), Gaps = 9/186 (4%)
Query: 315 VGLWRLVVVRNLPYEDPRRTGKIPKLLLHRLFPNVRFSVWIDAKLKLVVDPYLLLERFLW 374
+G WR++VVR+LP+ D R GKIPK+L HRLFP R+S+W+D+K + DP +LE LW
Sbjct: 2 IGRWRIIVVRSLPFVDQRLNGKIPKMLTHRLFPEARYSIWVDSKYQFRRDPIGVLEALLW 61
Query: 375 RKNATFAISRHYKRFDVFEEAEANKAAGKYDNASIDYQIEFYRNEGLTYYTPAKLPITSD 434
R N+TFAIS H R ++++E +A K ++ Q+ YR +G+ +L
Sbjct: 62 RTNSTFAISEHGARSNIYDEGKAIVQKHKATPEEVEVQLTQYRKDGMP--DEKRLHGLKA 119
Query: 435 VPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQISFSTVRDKIRARVGWMP--EMFLDC 492
+ E VI+RE P+TN F C WFNEV RFTSRDQ+SF V ++ MP MF C
Sbjct: 120 LSEASVIVRELAPVTNHFMCAWFNEVVRFTSRDQLSFPYVLWRLN-----MPGINMFTVC 174
Query: 493 ERRNFV 498
RR+ V
Sbjct: 175 TRRDLV 180
>Os01g0304300 Protein of unknown function DUF616 family protein
Length = 90
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 434 DVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQISFSTVRDKIRARVGWMPEMFLDCE 493
DVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQ+SFSTVRDKIR RV W +MFLDCE
Sbjct: 18 DVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFSTVRDKIRKRVNWTADMFLDCE 77
Query: 494 RRNFVIQ 500
RR+FV+Q
Sbjct: 78 RRDFVVQ 84
>Os02g0745800 Protein of unknown function DUF616 family protein
Length = 104
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 433 SDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQISFSTVRDKIRARVGWMP---EMF 489
+DVPEG I+R H P++NLF+CLWFNEV+RFTSRDQ+SF+ K+R P MF
Sbjct: 18 ADVPEGSFIVRAHTPMSNLFSCLWFNEVNRFTSRDQLSFAYTYLKLRRMNTGKPFHLNMF 77
Query: 490 LDCERRNFVIQGYHR 504
DCERR +HR
Sbjct: 78 KDCERRAITKLFHHR 92
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,142,516
Number of extensions: 732856
Number of successful extensions: 1899
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1888
Number of HSP's successfully gapped: 7
Length of query: 575
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 469
Effective length of database: 11,501,117
Effective search space: 5394023873
Effective search space used: 5394023873
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)