BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0458100 Os05g0458100|AK101652
(186 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0458100 Similar to FK506-binding protein 4 (EC 5.2.1.8... 300 4e-82
Os01g0844300 Similar to Peptidylprolyl isomerase 259 6e-70
Os04g0352400 Peptidylprolyl isomerase, FKBP-type domain con... 100 1e-21
Os02g0491400 Similar to Peptidylprolyl isomerase 99 1e-21
Os08g0525600 Similar to Peptidylprolyl isomerase 96 2e-20
Os01g0915800 Similar to FK506-binding protein 2-2 precursor... 86 2e-17
Os02g0760300 Similar to Immunophilin 81 4e-16
Os09g0501850 Similar to FK506-binding protein 2-1 precursor... 81 5e-16
Os04g0446500 Similar to FK506-binding protein 2 precursor (... 71 5e-13
>Os05g0458100 Similar to FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl
cis-trans isomerase) (PPIase) (Rotamase) (p59 protein)
(HSP binding immunophilin) (HBI) (FKBP52 protein) (52
kDa FK506 binding protein) (FKBP59)
Length = 186
Score = 300 bits (768), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MAEVADLTGDGGVLKTVVRKAKDDAIAPTDSLPLVDVHYEGTLAENGEVFDTTHEDNSIF 60
MAEVADLTGDGGVLKTVVRKAKDDAIAPTDSLPLVDVHYEGTLAENGEVFDTTHEDNSIF
Sbjct: 1 MAEVADLTGDGGVLKTVVRKAKDDAIAPTDSLPLVDVHYEGTLAENGEVFDTTHEDNSIF 60
Query: 61 SFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEYAYGSAGSPPEIPPNATLIFEVELVAC 120
SFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEYAYGSAGSPPEIPPNATLIFEVELVAC
Sbjct: 61 SFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEYAYGSAGSPPEIPPNATLIFEVELVAC 120
Query: 121 RPRKGSSLGSVSDEKARLEELKKQR 145
RPRKGSSLGSVSDEKARLEELKKQR
Sbjct: 121 RPRKGSSLGSVSDEKARLEELKKQR 145
>Os01g0844300 Similar to Peptidylprolyl isomerase
Length = 185
Score = 259 bits (663), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 121/144 (84%), Positives = 136/144 (94%)
Query: 1 MAEVADLTGDGGVLKTVVRKAKDDAIAPTDSLPLVDVHYEGTLAENGEVFDTTHEDNSIF 60
M+E DLTGD +LKTV+R+AKDDA AP+DSLP+VDVHYEGTLAENGEVFDTTHEDNS+F
Sbjct: 1 MSETIDLTGDRCILKTVIRRAKDDATAPSDSLPIVDVHYEGTLAENGEVFDTTHEDNSVF 60
Query: 61 SFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEYAYGSAGSPPEIPPNATLIFEVELVAC 120
SFEIG+G VIKAWDIA++TMKVGEVAKITCKPEYAYG+AGSPPEIPP+ATL FEVEL+AC
Sbjct: 61 SFEIGEGTVIKAWDIAVKTMKVGEVAKITCKPEYAYGAAGSPPEIPPDATLTFEVELIAC 120
Query: 121 RPRKGSSLGSVSDEKARLEELKKQ 144
RPRKGSS+ SVS+EKARLEELKKQ
Sbjct: 121 RPRKGSSVESVSEEKARLEELKKQ 144
>Os04g0352400 Peptidylprolyl isomerase, FKBP-type domain containing protein
Length = 585
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 35 VDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEY 94
V VHY GTL +G FD++ + + F F +GQG VIK WD ++TMK GE A T PE
Sbjct: 71 VQVHYTGTLL-DGTKFDSSRDRGTPFKFSLGQGEVIKGWDEGIKTMKKGEQAVFTVPPEL 129
Query: 95 AYGSAGSPPEIPPNATLIFEVELVA 119
AYG AGSPP IPPNATL F+VEL++
Sbjct: 130 AYGEAGSPPAIPPNATLRFDVELLS 154
>Os02g0491400 Similar to Peptidylprolyl isomerase
Length = 682
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 35 VDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEY 94
V VHY GTL +G FD++ + ++ F F +GQG VIK WD+ ++TMK GE A T PE
Sbjct: 116 VQVHYTGTLL-DGTKFDSSRDRDAPFKFTLGQGQVIKGWDLGIKTMKKGENAIFTIPPEL 174
Query: 95 AYGSAGSPPEIPPNATLIFEVELVA 119
AYG GSPP IPPNATL F+VEL++
Sbjct: 175 AYGEDGSPPVIPPNATLQFDVELIS 199
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
Query: 4 VADLTGDGGVLKTVVRKAKDDAIAPTDSLPLVDVHYEGTLAENGEVFDTT-HEDNSIFSF 62
V ++ D +LK ++ + + P+D LV V G L E+G +F T H+ + F F
Sbjct: 320 VTEIGNDKKILKKILHEG-EGYERPSDCT-LVRVKLIGKL-EDGTIFVTRGHDGDEPFEF 376
Query: 63 EIGQGAVIKAWDIALRTMKVGEVAKITCKPEYAYGSAGSPPE---IPPNATLIFEVELVA 119
+ + V++ D A+ +MK GEVA +T PEYA+GS + + +PPN+T+ +EVELV+
Sbjct: 377 KTDEDQVVEGLDKAVLSMKKGEVALVTIPPEYAFGSDETRQDLSVVPPNSTVYYEVELVS 436
Query: 120 CRPRKGS 126
K S
Sbjct: 437 FDKEKES 443
>Os08g0525600 Similar to Peptidylprolyl isomerase
Length = 580
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 35 VDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEY 94
V+VHY GTL +G+ FD++ + + F F++GQG VIK WD+ ++TMK GE A T P+
Sbjct: 67 VEVHYTGTLL-DGKKFDSSRDRGTPFKFKLGQGQVIKGWDLGIKTMKKGENAVFTIPPDL 125
Query: 95 AYGSAGSPPEIPPNATLIFEVELVA 119
AYG +GSPP IP +ATL F+VEL++
Sbjct: 126 AYGESGSPPTIPASATLQFDVELLS 150
>Os01g0915800 Similar to FK506-binding protein 2-2 precursor (EC 5.2.1.8)
(Peptidyl-prolyl cis- trans isomerase) (PPIase)
(Rotamase) (15 kDa FKBP) (FKBP-15-2)
Length = 158
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 35 VDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEY 94
+ VHY G+L + G VFD++++ F F +G G VIK WD L M VGE K+ +
Sbjct: 61 IKVHYRGSLTD-GSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKM 119
Query: 95 AYGSAGSPPEIPPNATLIFEVELVACRPRKGSSLGSVSD 133
YG GSPP+IP ATLIF+ EL+A G + G S+
Sbjct: 120 GYGERGSPPKIPGGATLIFDTELIAV---NGKTTGGASN 155
>Os02g0760300 Similar to Immunophilin
Length = 112
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 35 VDVHYEGTLAEN---GEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKVGEVAKITCK 91
V VH G +N + + T FSF IGQG+VIK WD + TM+VGEVA+I C
Sbjct: 22 VTVHCTGFGKDNDLAKKFWSTKDAGQEPFSFNIGQGSVIKGWDEGVMTMQVGEVARIQCT 81
Query: 92 PEYAYGSAGSPPE-IPPNATLIFEVELVACR 121
P+YAYG++G P I PN+ L+FE+E+++ +
Sbjct: 82 PDYAYGASGFPAWGIRPNSVLVFEIEVLSAQ 112
>Os09g0501850 Similar to FK506-binding protein 2-1 precursor (EC 5.2.1.8)
(Peptidyl-prolyl cis- trans isomerase) (PPIase)
(Rotamase) (15 kDa FKBP) (FKBP-15-1)
Length = 154
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 35 VDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEY 94
V VHY G L +G FD+++E FE+G G VIK WD + M VGE K+ +
Sbjct: 53 VKVHYRGKLT-DGTDFDSSYERGDPIEFELGTGQVIKGWDQGILGMCVGEKRKLKIPSKL 111
Query: 95 AYGSAGSPPEIPPNATLIFEVELVA 119
YG+ GSPP IP ATLIF+ ELVA
Sbjct: 112 GYGAQGSPPTIPGGATLIFDTELVA 136
>Os04g0446500 Similar to FK506-binding protein 2 precursor (EC 5.2.1.8)
(Peptidyl-prolyl cis- trans isomerase) (PPIase)
(Rotamase) (FKBP-13) (FKBP-15)
Length = 525
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 35 VDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEY 94
V V Y G L +NG +FD+T F F +G G VIK WDI + M+VG+ ++T P
Sbjct: 442 VSVKYIGKL-KNGTIFDST-VGRRAFDFRLGIGEVIKGWDIGINGMRVGDKRRLTIPPSM 499
Query: 95 AYGSAGSPPEIPPNATLIFEVELVACR 121
YG+ P IP N+TL+F+VELV +
Sbjct: 500 GYGNKRMGP-IPQNSTLVFDVELVNVK 525
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.132 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,546,607
Number of extensions: 230774
Number of successful extensions: 610
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 616
Number of HSP's successfully gapped: 10
Length of query: 186
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 91
Effective length of database: 12,075,471
Effective search space: 1098867861
Effective search space used: 1098867861
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 153 (63.5 bits)