BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0457200 Os05g0457200|003-011-H10
(322 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0457200 Similar to Protein phpsphatase 2C (PP2C) (EC 3... 380 e-106
Os01g0846300 Similar to Protein phosphatase 2C 182 2e-46
Os03g0268600 Similar to Protein phosphatase type 2C 148 4e-36
Os09g0325700 Similar to Protein phpsphatase 2C (PP2C) (EC 3... 133 1e-31
Os11g0473500 99 5e-21
Os06g0490600 94 1e-19
Os05g0572700 Similar to Protein phosphatase 2C 90 2e-18
Os04g0167900 Protein phosphatase 2C family protein 81 1e-15
Os01g0656200 Protein phosphatase 2C family protein 80 2e-15
Os05g0537400 Similar to Protein phosphatase 2C 78 7e-15
>Os05g0457200 Similar to Protein phpsphatase 2C (PP2C) (EC 3.1.3.16)
Length = 322
Score = 380 bits (977), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/283 (70%), Positives = 199/283 (70%)
Query: 40 SLEPPQEDADAGVARCGKRQRVXXXXXXXXXXXXXPCRPSAGAEFGSRWWPRYGVTSVFG 99
SLEPPQEDADAGVARCGKRQRV PCRPSAGAEFGSRWWPRYGVTSVFG
Sbjct: 40 SLEPPQEDADAGVARCGKRQRVAGARAGAGAATAGPCRPSAGAEFGSRWWPRYGVTSVFG 99
Query: 100 RRREMEDAVSIRPDFLRGSTSSGKHHFFGVFDGHGCSHVARMCQDRMHELVVDAYXXXXX 159
RRREMEDAVSIRPDFLRGSTSSGKHHFFGVFDGHGCSHVARMCQDRMHELVVDAY
Sbjct: 100 RRREMEDAVSIRPDFLRGSTSSGKHHFFGVFDGHGCSHVARMCQDRMHELVVDAYKKAVS 159
Query: 160 XXXXXXXXXXXXDVMEKGFARMDDEATIWAKSRTGGEPACRCELQTPARCDHVGSTXXXX 219
DVMEKGFARMDDEATIWAKSRTGGEPACRCELQTPARCDHVGST
Sbjct: 160 GKEAAAAAPAWKDVMEKGFARMDDEATIWAKSRTGGEPACRCELQTPARCDHVGSTAVVA 219
Query: 220 XXXXXXXXXXNSGDSRAVLCRAGVPVPLSVDHKVSSKALIQXXXXXXXXXIHLSVCXXXX 279
NSGDSRAVLCRAGVPVPLSVDHKVSSKALIQ IHLSVC
Sbjct: 220 VVGPNRVVVANSGDSRAVLCRAGVPVPLSVDHKVSSKALIQRRLPRLLLRIHLSVCSSRT 279
Query: 280 XXXXXXXXXXXXXXXXXXXXXXXXXXXPCLEPSVRAAFALRSF 322
PCLEPSVRAAFALRSF
Sbjct: 280 GRTSWSASRRRAAASSTGTAPGCSASSPCLEPSVRAAFALRSF 322
>Os01g0846300 Similar to Protein phosphatase 2C
Length = 414
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 120/201 (59%), Gaps = 13/201 (6%)
Query: 54 RCGKRQRVXXXXXXXXXXXXXPC--RPSAGAEFGSRWWPRYGVTSVFGRRREMEDAVSIR 111
R GKRQR+ RPS G + +PRYGVT+V GRRREMEDAVSIR
Sbjct: 63 RPGKRQRLARTASGAPRPDEDSASERPSCGR---TEEFPRYGVTAVCGRRREMEDAVSIR 119
Query: 112 PDFLRGSTSSGKHHFFGVFDGHGCSHVARMCQDRMHELVVDAYXXXXXXXXXXXXXXXXX 171
PDFL +SGK HF+GVFDGHGCSHVA CQDRMHE+V + +
Sbjct: 120 PDFL---PASGKFHFYGVFDGHGCSHVATTCQDRMHEIVAEEHNKGASGEVAPWR----- 171
Query: 172 DVMEKGFARMDDEATIWAKSRTGGEPACRCELQTPARCDHVGSTXXXXXXXXXXXXXXNS 231
DVMEK FARMD E A +R+ EPAC CE QTP+R DH GST N+
Sbjct: 172 DVMEKSFARMDGEVGNRASTRSDDEPACPCEQQTPSRRDHAGSTAVVAVVSPTQVVVANA 231
Query: 232 GDSRAVLCRAGVPVPLSVDHK 252
GDSRAV+ RAGVPV LSVDHK
Sbjct: 232 GDSRAVISRAGVPVALSVDHK 252
>Os03g0268600 Similar to Protein phosphatase type 2C
Length = 404
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 93/162 (57%), Gaps = 8/162 (4%)
Query: 91 RYGVTSVFGRRREMEDAVSIRPDFLRGSTSSGKHHFFGVFDGHGCSHVARMCQDRMHELV 150
RYG TSV GRRR+MED+VS P FL G HHFFGVFDGHGCSHVA C RMHE+V
Sbjct: 77 RYGFTSVCGRRRDMEDSVSACPGFLPG------HHFFGVFDGHGCSHVATSCGQRMHEIV 130
Query: 151 VDAYXXXXXXXXXXXXXXXXXDVMEKGFARMDDEATIWAKSRTGGEPACRCELQTPARCD 210
VD VME+ FARMD EA ++ P CRCE+Q P +CD
Sbjct: 131 VDEAGAAAGSAGLDEEARWRG-VMERSFARMDAEAVASSRGSVAPAPTCRCEMQLP-KCD 188
Query: 211 HVGSTXXXXXXXXXXXXXXNSGDSRAVLCRAGVPVPLSVDHK 252
HVGST N GDSRAVLCR G +PLS DHK
Sbjct: 189 HVGSTAVVAVLGPRHVVVANCGDSRAVLCRGGAAIPLSCDHK 230
>Os09g0325700 Similar to Protein phpsphatase 2C (PP2C) (EC 3.1.3.16)
Length = 358
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 93/165 (56%), Gaps = 10/165 (6%)
Query: 91 RYGVTSVFGRRREMEDAVSIRPDFL---RGSTSSGKHHFFGVFDGHGCSHVARMCQDRMH 147
R+G SV GRRREMEDAVS+R F G ++ + F+GVFDGHGCSHVA C++RMH
Sbjct: 74 RHGAASVAGRRREMEDAVSLREAFAAPANGEVAAARCDFYGVFDGHGCSHVADACRERMH 133
Query: 148 ELVVDAYXXXXXXXXXXXXXXXXXDVMEKGFARMDDEATIWAKSRTGGEPACRCELQTPA 207
ELV + + ME+ FARMD E ++ +G +CRCE Q
Sbjct: 134 ELVAEEM-GAGSPAAAAREPASWTETMERSFARMDAEVIAGCRAESG---SCRCEGQ--- 186
Query: 208 RCDHVGSTXXXXXXXXXXXXXXNSGDSRAVLCRAGVPVPLSVDHK 252
+CDHVGST N GDSRAVLCR G PV LS DHK
Sbjct: 187 KCDHVGSTAVVAVVEESRVVVANCGDSRAVLCRGGAPVQLSSDHK 231
>Os11g0473500
Length = 125
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 104 MEDAVSIRPDFLRGSTSSGKHHFFGVFDGHGCSHVARMCQDRMHELVVDAYXXXXXXXXX 163
MEDAVSIRPDFL GSTSSGKHHFFGVFDGH CSH+A M + ++ V+
Sbjct: 1 MEDAVSIRPDFLPGSTSSGKHHFFGVFDGHDCSHIAHMSLWPIQQMRVE--LCAKRSPAA 58
Query: 164 XXXXXXXXDVMEKGFARMDDEATIWAKSRTGGE 196
D MEKGFARMDDEAT WAKS + E
Sbjct: 59 AAAASAWKDAMEKGFARMDDEATSWAKSSSREE 91
>Os06g0490600
Length = 246
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 82/164 (50%), Gaps = 18/164 (10%)
Query: 91 RYGVTSVFGRRREMEDAVSIRPDF---LRGST-----SSGKHHFFGVFDGHGCSHVARMC 142
R+G SV GRRRE +D S+R F + G ++ + F+GVFDGHGCSHVA C
Sbjct: 72 RHGAASVVGRRRETKDIASLREAFAAPVDGEVEDLDVAAARCDFYGVFDGHGCSHVADAC 131
Query: 143 QDRMHELVVDAYXXXXXXXXXXXXXXXXXDVMEKGFARMDDEATIWAKSRTGGEPACRCE 202
++RMHELV + ME+ FARMD E ++ +G +CRC+
Sbjct: 132 RERMHELVAEEMGAGAAPREPASWTG----AMERSFARMDAEVIAGCRAESG---SCRCK 184
Query: 203 LQTPARCDHVGSTXXXXXXXXXXXXXXNSGDSRAVLCRAGVPVP 246
+CDH+GST N GDS +L R G PVP
Sbjct: 185 ---GWKCDHMGSTTVVAIVEESHVIVANCGDSSVMLRRDGAPVP 225
>Os05g0572700 Similar to Protein phosphatase 2C
Length = 381
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 80/180 (44%), Gaps = 20/180 (11%)
Query: 87 RWWP---RYGVTSVFGRRREMEDAVSIRPDFL----------RGSTSSGKHHFFGVFDGH 133
R WP +G SV GRRREMEDAV+I F+ RG G+ FF V+DGH
Sbjct: 70 RSWPACVSHGSVSVIGRRREMEDAVAIERTFMASTGDGAGAIRGG-GEGEEDFFAVYDGH 128
Query: 134 GCSHVARMCQDRMHELVVDAYXXXXXXXXXXXXXXXX-XDVMEKGFARMDDEATIWAKSR 192
G S VA C+ RMH ++ + + M FARMD E +
Sbjct: 129 GGSRVAEACRKRMHVVLAEEVSLRRLRGQSASGGDVRWKEAMLASFARMDGEVVGSVAA- 187
Query: 193 TGGEPACRCELQTPARCDHVGSTXXXXXXXXXXXXXXNSGDSRAVLCRAGVPVPLSVDHK 252
A R + P+ VGST N GDSRAVL R GV +PLS DHK
Sbjct: 188 ----AAPRVDGTEPSGFRTVGSTAVVAVVGRRRIVVANCGDSRAVLSRGGVALPLSTDHK 243
>Os04g0167900 Protein phosphatase 2C family protein
Length = 444
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 78 PSAGAEFGSRWWPRYGVTSVFGRRREMEDAVSIRPDF---LRGSTSSGKHHFFGVFDGHG 134
PS + + W +G S+ GR R+MEDAVS+RP F L GS HFF VFDGHG
Sbjct: 100 PSGASTAAAVWPVAFGSVSLAGRMRDMEDAVSLRPSFCTWLDGS----PMHFFAVFDGHG 155
Query: 135 CSHVARMCQDRMHELVVDAYXXXXXXXXXXXXXXXXXDVMEKGFA-----------RMDD 183
HV+ +C+++MH +V + + E+ A R
Sbjct: 156 GPHVSALCREQMHVIVAEEMVAEAAALRQRQPAAMEEEEEERAVAGGAVAELRPGGRAGG 215
Query: 184 EATIWAKSRTGGEPACRCELQTPARCDHVGSTXXXXXXXXXXXXXXNSGDSRAVLCRAGV 243
G P C QT A +GST N GDSRAVLCRAG
Sbjct: 216 GGVRVRARHRAGVP-CPLSGQTGA---IIGSTAVVALLVRDRLVVSNCGDSRAVLCRAGD 271
Query: 244 PVPLSVDHK 252
P+PLS DHK
Sbjct: 272 PLPLSSDHK 280
>Os01g0656200 Protein phosphatase 2C family protein
Length = 403
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 78/181 (43%), Gaps = 24/181 (13%)
Query: 89 WP---RYGVTSVFGRRREMEDAVSIRPDFLRGSTSSGKH--------------HFFGVFD 131
WP +G SV GRRREMEDA+ + FL S + FF V+D
Sbjct: 85 WPACVSHGAVSVIGRRREMEDAIFVAAPFLAASKEAAVEGSGVAEEEGKEEDEGFFAVYD 144
Query: 132 GHGCSHVARMCQDRMHELVVDAYXXXXXXXXXXXXXXXXXDVMEKGFARMDDEATIWAKS 191
GHG S VA C++RMH ++ + DV ++ AR EA +
Sbjct: 145 GHGGSRVAEACRERMHVVLAE----EVRVRRLLQGGGGGADVEDEDRARWK-EAMAACFT 199
Query: 192 RTGGEPACRCELQTPARCDHVGSTXXXXXXXXXXXXXXNSGDSRAVLCRAGVPVPLSVDH 251
R GE E T + VGST N GDSRAVL R GV VPLS DH
Sbjct: 200 RVDGEVGGAEEADTGEQT--VGSTAVVAVVGPRRIVVANCGDSRAVLSRGGVAVPLSSDH 257
Query: 252 K 252
K
Sbjct: 258 K 258
>Os05g0537400 Similar to Protein phosphatase 2C
Length = 387
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 73/184 (39%), Gaps = 24/184 (13%)
Query: 90 PRYGVTSVFGRRREMEDAVSIRPDF------------------LRGSTSSGKHHFFGVFD 131
P +G S GR EMEDA + P F L H FGVFD
Sbjct: 59 PVWGCASTRGRSAEMEDASAAVPRFADVPVRLLASRRDLDALGLDADALRLPAHLFGVFD 118
Query: 132 GHGCSHVARMCQDRMHELVVDAYXXXXXXXXXXXXXXXXX---DVMEKGFARMDDEATIW 188
GHG + VA C++R+H ++ + DV K F R+DDE +
Sbjct: 119 GHGGAEVANYCRERIHVVLSEELKRLGKNLGEMGEVDMKEHWDDVFTKCFQRVDDEVSGR 178
Query: 189 AKSRTGGEPACRCELQTPARCDHVGSTXXXXXXXXXXXXXXNSGDSRAVLCRAGVPVPLS 248
G R E P ++VGST N GDSR VLCR PV LS
Sbjct: 179 VTRVVNGGGEVRSE---PVTAENVGSTAVVALVCSSHVVVANCGDSRIVLCRGKEPVALS 235
Query: 249 VDHK 252
+DHK
Sbjct: 236 IDHK 239
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.135 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,690,825
Number of extensions: 247855
Number of successful extensions: 521
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 504
Number of HSP's successfully gapped: 10
Length of query: 322
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 221
Effective length of database: 11,762,187
Effective search space: 2599443327
Effective search space used: 2599443327
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 156 (64.7 bits)