BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0453700 Os05g0453700|AK063881
(165 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0453700 Similar to ENOD18 protein (Fragment) 312 7e-86
Os01g0849600 Similar to ENOD18 protein (Fragment) 199 7e-52
Os02g0773200 Universal stress protein (Usp) family protein 167 2e-42
Os05g0157200 Universal stress protein (Usp) family protein 167 4e-42
Os01g0170600 Universal stress protein (Usp) family protein 140 3e-34
Os02g0760500 Similar to ER6 protein (Fragment) 77 5e-15
Os03g0750000 Universal stress protein (Usp) family protein 75 1e-14
Os01g0303800 Universal stress protein (Usp) family protein 71 3e-13
AK103732 71 3e-13
Os01g0511100 Universal stress protein (Usp) family protein 70 5e-13
>Os05g0453700 Similar to ENOD18 protein (Fragment)
Length = 165
Score = 312 bits (799), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 155/165 (93%), Positives = 155/165 (93%)
Query: 1 MAGGGRADDERRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGGEEAKHALWG 60
MAGGGRADDERRIGVAMDYSASSKRALDWAIANLLRRGD GGEEAKHALWG
Sbjct: 1 MAGGGRADDERRIGVAMDYSASSKRALDWAIANLLRRGDHLVVLHVLHHGGEEAKHALWG 60
Query: 61 KSGSPLIPLSEFRDPTAMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDA 120
KSGSPLIPLSEFRDPTAMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDA
Sbjct: 61 KSGSPLIPLSEFRDPTAMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDA 120
Query: 121 VEEQKIDTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVKGK 165
VEEQKIDTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVKGK
Sbjct: 121 VEEQKIDTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVKGK 165
>Os01g0849600 Similar to ENOD18 protein (Fragment)
Length = 162
Score = 199 bits (506), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 97/159 (61%), Positives = 117/159 (73%)
Query: 7 ADDERRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGGEEAKHALWGKSGSPL 66
A ERRIGVAMD+S SSK+AL WA NLLR+GD G +EAK+ LW +GSPL
Sbjct: 4 AGGERRIGVAMDFSPSSKKALQWAADNLLRKGDTLVLLHIRHHGRDEAKNVLWSHTGSPL 63
Query: 67 IPLSEFRDPTAMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDAVEEQKI 126
IPL E + Q+Y + D EV DML+ +R+ EL+VV K+YWG+ REK+C+AV E +
Sbjct: 64 IPLEELMETAVRQRYDIPSDEEVFDMLNAVSREKELSVVLKMYWGEPREKVCEAVGELNL 123
Query: 127 DTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVKGK 165
++LVMGSRGLG IQRILLGSVTNYVLSNASCPVTVVK K
Sbjct: 124 ESLVMGSRGLGQIQRILLGSVTNYVLSNASCPVTVVKAK 162
>Os02g0773200 Universal stress protein (Usp) family protein
Length = 165
Score = 167 bits (424), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 111/158 (70%)
Query: 7 ADDERRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGGEEAKHALWGKSGSPL 66
A ++R IG+ MDYS SSK A WA+ NL++ GD G + + LW +GSPL
Sbjct: 2 AAEKRTIGLGMDYSPSSKAAAKWAVDNLVKAGDRIILVHVLPKGADASHKELWKSTGSPL 61
Query: 67 IPLSEFRDPTAMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDAVEEQKI 126
IPL EF + +YG++ D EVL++L ++ ++ V+AK+YWGDAREKLC+AV++ K+
Sbjct: 62 IPLLEFMEMNVQARYGINPDKEVLEILQAESKSKQVEVLAKVYWGDAREKLCEAVDDLKV 121
Query: 127 DTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVKG 164
+T V+G RGLG ++R LLGSV+NYV++NA+CPVTVV+
Sbjct: 122 NTFVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVRA 159
>Os05g0157200 Universal stress protein (Usp) family protein
Length = 167
Score = 167 bits (422), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 110/162 (67%), Gaps = 1/162 (0%)
Query: 3 GGGRADDERRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGG-EEAKHALWGK 61
G A ER +G A+D+S S+ AL WA NLLR GD E+ + LW
Sbjct: 2 AGEAAAAERWVGAAVDFSEGSRAALRWAADNLLRAGDHLILLHVLKDPDYEQGETLLWEA 61
Query: 62 SGSPLIPLSEFRDPTAMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDAV 121
+GSPLIPLS+F +PT ++YG DAE LDML+T ARQ E+ VV K+ WGD REKLC A+
Sbjct: 62 TGSPLIPLSDFSEPTIAKKYGAKPDAETLDMLNTVARQKEVVVVFKVLWGDPREKLCQAI 121
Query: 122 EEQKIDTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVK 163
E + LV+GSRGLG ++R+LLGSV++YV++NA+CPVTVVK
Sbjct: 122 NEIPMSCLVIGSRGLGKLKRVLLGSVSDYVVNNATCPVTVVK 163
>Os01g0170600 Universal stress protein (Usp) family protein
Length = 160
Score = 140 bits (354), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
Query: 11 RRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXX-GGEEAKHALWGKSGSPLIPL 69
R+IGVA+D+S+ SK AL WA NL R GD E+ LW +SGSPLIPL
Sbjct: 4 RKIGVAVDFSSCSKAALRWASTNLTRSGDQLVLIHVNSSYHNEQGAVQLWEQSGSPLIPL 63
Query: 70 SEFRDPTAMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDAVEEQKIDTL 129
+EF DP + Y V D E L++L+ + Q + V+AK+ +GD +KL +AV+ ++ L
Sbjct: 64 AEFSDPHVAKTYAVSPDKETLEILNQMSNQRGVEVLAKILYGDPAKKLYEAVDLVPLNCL 123
Query: 130 VMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVK 163
V+G+RGL +++R L+GSV++Y+++NA+CPVTVVK
Sbjct: 124 VVGNRGLSTLKRALMGSVSSYIVNNATCPVTVVK 157
>Os02g0760500 Similar to ER6 protein (Fragment)
Length = 162
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
Query: 1 MAGGGRADDERRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGGEEAKHALWG 60
MA G A + VA+D S S AL WA+ NL R D + G
Sbjct: 1 MATGNLAS----VVVAVDGSEESMNALRWALDNLRLRPDGALVVLHV----QPPPSIAAG 52
Query: 61 KSGSPLIPL---SEFRDPTAMQQYGVHCDAEVLDMLDTAAR---QLELTVVAKLYWGDAR 114
+ P IP SE P Q H +LD A + + + V + GD +
Sbjct: 53 LNPGP-IPFGGPSEVEVPAFTQAIEAHQRRITQAILDHALKICSEKNVEVKTDVVVGDPK 111
Query: 115 EKLCDAVEEQKIDTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVKG 164
EK+C+ K D LVMG R G ++R+ LGSV+NY ++N CPV V+KG
Sbjct: 112 EKICEVTANLKADLLVMGCRAFGPLKRMFLGSVSNYCINNVVCPVVVIKG 161
>Os03g0750000 Universal stress protein (Usp) family protein
Length = 128
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 97 ARQLELTVVAKLYWGDAREKLCDAVEEQKIDTLVMGSRGLGSIQRILLGSVTNYVLSNAS 156
+Q E++ + GDA+E +C AVEE D LV+GSRGLG I+R LGSV++Y++ +A
Sbjct: 55 CKQREVSATGAIVEGDAKEAICQAVEEMHADMLVLGSRGLGKIKRAFLGSVSDYLVHHAC 114
Query: 157 CPVTVVK 163
CPV VVK
Sbjct: 115 CPVLVVK 121
>Os01g0303800 Universal stress protein (Usp) family protein
Length = 182
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 72/173 (41%), Gaps = 44/173 (25%)
Query: 11 RRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGGEEAKHALWGKSGSPLIPLS 70
RRI VA+D S S AL W +AN++ SG + L
Sbjct: 31 RRIVVAVDESEESTHALTWCLANVV------------------------SSSGGDTLVLL 66
Query: 71 EFRDP----TAMQQYGVHCDAEVLDMLD----------------TAARQLELTVVAKLYW 110
R P AM G ++V+ +D A +TV +
Sbjct: 67 HARRPRPVYAAMDSSGYMMTSDVMASMDKYAAAVSAAAVGKAKHICAAFPHVTVETMVES 126
Query: 111 GDAREKLCDAVEEQKIDTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVK 163
GD R+ +CDA E+ D LVMG+ G G IQR LGSV+N+ N CPV +VK
Sbjct: 127 GDPRDVICDATEKMAADLLVMGTHGYGLIQRAFLGSVSNHCAQNCKCPVLIVK 179
>AK103732
Length = 182
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 72/173 (41%), Gaps = 44/173 (25%)
Query: 11 RRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGGEEAKHALWGKSGSPLIPLS 70
RRI VA+D S S AL W +AN++ SG + L
Sbjct: 31 RRIVVAVDESEESTHALTWCLANVV------------------------SSSGGDTLVLL 66
Query: 71 EFRDP----TAMQQYGVHCDAEVLDMLD----------------TAARQLELTVVAKLYW 110
R P AM G ++V+ +D A +TV +
Sbjct: 67 HARRPRPVYAAMDSSGYMMTSDVMASMDKYAAAVSAAAVGKAKHICAAFPHVTVETMVES 126
Query: 111 GDAREKLCDAVEEQKIDTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVK 163
GD R+ +CDA E+ D LVMG+ G G IQR LGSV+N+ N CPV +VK
Sbjct: 127 GDPRDVICDATEKMAADLLVMGTHGYGLIQRAFLGSVSNHCAQNCKCPVLIVK 179
>Os01g0511100 Universal stress protein (Usp) family protein
Length = 167
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 11 RRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGGEEAKHALWGKSGSPLIPL- 69
++ VA+D S S AL+WA+ NL L + PL+PL
Sbjct: 12 QKAMVAVDESEFSHHALEWALRNL----------------APTIAPPLLVLTVQPLLPLG 55
Query: 70 ----SEFRDP-----------TAMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAR 114
+ F P AMQ+ +LD Q + V + GD +
Sbjct: 56 YVSAASFGSPLGTPVVAPELIKAMQEQQQQLSQALLDKAKQICAQHGVAVETMIKVGDPK 115
Query: 115 EKLCDAVEEQKIDTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVK 163
E +C A EE K+D L++GS G +QR+ LGSV+NY + ++ CPV VVK
Sbjct: 116 EMICQAAEESKVDLLIVGSHSRGPVQRLFLGSVSNYCMHHSKCPVLVVK 164
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.134 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,266,526
Number of extensions: 188135
Number of successful extensions: 435
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 436
Number of HSP's successfully gapped: 10
Length of query: 165
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 72
Effective length of database: 12,179,899
Effective search space: 876952728
Effective search space used: 876952728
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 152 (63.2 bits)