Os05g0453700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ENOD18 protein (Fragment).
FiT-DB / Search/ Help/ Sample detail
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Os05g0453700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ENOD18 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 508.56 | 1.06 | 8.24 | -6.45 | 0.804 | -1.13 | 1.77 | -5.44 | -1.74 | 0.925 | 1004 | 4997 | -- | -- |
| 540.83 | 1.08 | 8.21 | -6.22 | 0.81 | -1.35 | 1.78 | -- | -1.8 | 0.912 | 1004 | 4382 | -- | -- |
| 520.8 | 1.06 | 8.25 | -6.52 | 0.822 | -1.14 | -- | -5.41 | -1.76 | 1.43 | 1004 | 5028 | -- | -- |
| 551.26 | 1.09 | 8.21 | -6.32 | 0.833 | -1.31 | -- | -- | -1.8 | 1.6 | 1004 | 4379 | -- | -- |
| 561.47 | 1.1 | 8.24 | -6.47 | -- | -1.18 | -- | -5.17 | -1.74 | -- | 1004 | 5022 | -- | -- |
| 586.83 | 1.14 | 8.16 | -6.38 | 0.81 | -- | 1.61 | -- | -1.57 | 1.03 | -- | -- | -- | -- |
| 596.96 | 1.14 | 8.16 | -6.44 | 0.821 | -- | -- | -- | -1.58 | 1.57 | -- | -- | -- | -- |
| 591.9 | 1.13 | 8.2 | -6.36 | -- | -1.28 | -- | -- | -1.81 | -- | 1004 | 5001 | -- | -- |
| 1556.36 | 1.84 | 8.06 | -- | 0.831 | -1.95 | -- | -- | -1.03 | 2.44 | 999.3 | 5261 | -- | -- |
| 638.19 | 1.18 | 8.15 | -6.4 | -- | -- | -- | -- | -1.56 | -- | -- | -- | -- | -- |
| 1689.1 | 1.92 | 8 | -- | 0.708 | -- | -- | -- | -0.862 | 1.28 | -- | -- | -- | -- |
| 1539.82 | 1.83 | 8.05 | -- | -- | -2.46 | -- | -- | -1.09 | -- | 996.7 | 11438 | -- | -- |
| 1720.08 | 1.94 | 7.99 | -- | -- | -- | -- | -- | -0.85 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 497.12 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 2 | 499.42 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 7 | 504.23 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 10 | 504.65 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 11 | 504.73 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 14 | 505.16 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 15 | 505.16 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 32 | 506.50 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 44 | 507.24 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 114 | 511.37 | humidity | 80 | 4320 | > th | dose dependent | rect. | 10 | 5 |
| 126 | 511.69 | humidity | 80 | 1440 | > th | dose dependent | rect. | 2 | 2 |
| 149 | 512.61 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 19 | 16 |
| 164 | 513.06 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 19 | 16 |
| 198 | 513.83 | wind | 3 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 222 | 514.13 | humidity | 80 | 4320 | > th | dose dependent | rect. | 12 | 2 |
| 234 | 514.36 | wind | 3 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 252 | 514.59 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 10 | NA |
| 260 | 514.77 | temperature | 20 | 30 | > th | dose independent | rect. | 4 | 16 |
| 265 | 514.84 | humidity | 90 | 1440 | > th | dose dependent | rect. | 1 | 19 |
| 340 | 515.94 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 10 | NA |
| 342 | 515.95 | humidity | 90 | 1440 | > th | dose dependent | rect. | 2 | 6 |
| 349 | 516.00 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 24 | 9 |
| 373 | 516.36 | humidity | 50 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 378 | 516.41 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 7 | 4 |
| 393 | 516.53 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 428 | 516.90 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 443 | 517.08 | humidity | 90 | 1440 | < th | dose independent | rect. | 24 | 5 |
| 446 | 517.10 | wind | 3 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 467 | 517.34 | humidity | 80 | 4320 | > th | dose dependent | rect. | 3 | 14 |
| 468 | 517.37 | humidity | 90 | 1440 | > th | dose independent | rect. | 24 | 3 |
| 481 | 517.53 | humidity | 90 | 1440 | > th | dose dependent | rect. | 1 | 13 |
| 489 | 517.66 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 7 | 4 |
| 680 | 519.14 | humidity | 80 | 4320 | > th | dose independent | rect. | 9 | 7 |
| 701 | 519.28 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 5 | 20 |
| 744 | 519.49 | atmosphere | 1005 | 4320 | < th | dose independent | no | NA | NA |
| 793 | 519.76 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 15 | 7 |
| 802 | 519.81 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 15 | 7 |
| 841 | 520.03 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 842 | 520.03 | wind | 1 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 874 | 520.17 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 11 | 11 |
| 895 | 520.31 | humidity | 80 | 4320 | < th | dose independent | rect. | 10 | 6 |
| 906 | 520.36 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 926 | 520.47 | atmosphere | 995 | 14400 | < th | dose independent | sin | 21 | NA |
| 930 | 520.48 | atmosphere | 995 | 14400 | > th | dose independent | sin | 21 | NA |
| 932 | 520.49 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 949 | 520.52 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 5 | 14 |
| 995 | 520.68 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 5 | 22 |