BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0453700 Os05g0453700|AK063881
(165 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G53990.1 | chr3:19989658-19991019 REVERSE LENGTH=161 195 8e-51
AT3G17020.1 | chr3:5802728-5804063 REVERSE LENGTH=164 168 1e-42
AT3G03270.1 | chr3:761383-763075 REVERSE LENGTH=202 132 7e-32
AT1G68300.1 | chr1:25598518-25599261 REVERSE LENGTH=161 71 2e-13
AT1G09740.1 | chr1:3154603-3155834 FORWARD LENGTH=172 70 4e-13
AT3G62550.1 | chr3:23136194-23137074 FORWARD LENGTH=163 70 7e-13
AT1G11360.1 | chr1:3822171-3822899 REVERSE LENGTH=243 67 3e-12
AT3G58450.1 | chr3:21622032-21623057 FORWARD LENGTH=205 65 1e-11
AT3G01520.1 | chr3:208506-209921 FORWARD LENGTH=176 61 3e-10
AT2G47710.1 | chr2:19555045-19555956 REVERSE LENGTH=163 57 4e-09
AT5G14680.1 | chr5:4731620-4733025 REVERSE LENGTH=176 56 1e-08
AT5G54430.1 | chr5:22097563-22099693 REVERSE LENGTH=243 55 1e-08
AT3G11930.3 | chr3:3776371-3777393 FORWARD LENGTH=227 55 2e-08
AT2G21620.2 | chr2:9248749-9249986 FORWARD LENGTH=194 54 5e-08
>AT3G53990.1 | chr3:19989658-19991019 REVERSE LENGTH=161
Length = 160
Score = 195 bits (496), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 119/154 (77%)
Query: 10 ERRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGGEEAKHALWGKSGSPLIPL 69
+R IG+AMD+S SSK AL WAI NL +GD G+E++++LW KSGSPLIPL
Sbjct: 4 DRNIGIAMDFSESSKNALKWAIENLADKGDTIYIIHTLPLSGDESRNSLWFKSGSPLIPL 63
Query: 70 SEFRDPTAMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDAVEEQKIDTL 129
+EFR+P M++YGV D LDMLDT +RQ E+ VV KLYWGDAREKL DAV++ K+D++
Sbjct: 64 AEFREPEIMEKYGVKTDIACLDMLDTGSRQKEVHVVTKLYWGDAREKLVDAVKDLKLDSI 123
Query: 130 VMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVK 163
VMGSRGL ++QRI++GSV+++V+ +A CPVTVVK
Sbjct: 124 VMGSRGLSALQRIIMGSVSSFVIQHAPCPVTVVK 157
>AT3G17020.1 | chr3:5802728-5804063 REVERSE LENGTH=164
Length = 163
Score = 168 bits (426), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 11 RRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXX-XGGEEAKHALWGKSGSPLIPL 69
RRIGVA+D+S SK+AL WAI N++R GD EE + LW GSP IP+
Sbjct: 7 RRIGVAVDFSDCSKKALSWAIDNVVRDGDHLILITIAHDMNYEEGEMQLWETVGSPFIPM 66
Query: 70 SEFRDPTAMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDAVEEQKIDTL 129
SEF D M++Y + DAE LD+++TAAR+ +TVV K+YWGD REK+C A E+ + +L
Sbjct: 67 SEFSDAAVMKKYALKPDAETLDIVNTAARKKTITVVMKIYWGDPREKICAAAEQIPLSSL 126
Query: 130 VMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVKG 164
VMG+RGLG ++R+++GSV+N+V++N +CPVTVVK
Sbjct: 127 VMGNRGLGGLKRMIMGSVSNHVVNNVACPVTVVKA 161
>AT3G03270.1 | chr3:761383-763075 REVERSE LENGTH=202
Length = 201
Score = 132 bits (333), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 90/131 (68%)
Query: 11 RRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGGEEAKHALWGKSGSPLIPLS 70
R +GV MDYS +SK AL WA NLL GD + + L+ ++GSPLIPL
Sbjct: 5 RTVGVGMDYSPTSKLALRWAAENLLEDGDTVILIHVQPQNADHTRKILFEETGSPLIPLE 64
Query: 71 EFRDPTAMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDAVEEQKIDTLV 130
EFR+ +QYG+ D EVLD+LDT +R ++ VVAK+YWGD REKLCDAVE K+D++V
Sbjct: 65 EFREVNLSKQYGLAYDPEVLDVLDTLSRAKKVKVVAKVYWGDPREKLCDAVENLKLDSIV 124
Query: 131 MGSRGLGSIQR 141
+GSRGLGS++R
Sbjct: 125 LGSRGLGSLKR 135
>AT1G68300.1 | chr1:25598518-25599261 REVERSE LENGTH=161
Length = 160
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 11/158 (6%)
Query: 11 RRIGVAMDYSASSKRALDWAIANL---LRRGDXXXXXXXXXXGGEEAKHALWGKSGSPLI 67
+++ VA+D S SKRAL W + L L D + +G + LI
Sbjct: 10 KQVMVAIDESECSKRALQWTLVYLKDSLADSDIILFTAQPHLDLSCVYASSYGAAPIELI 69
Query: 68 PLSEFRDPTAMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDAVEEQKID 127
++Q+ + LD + +T L +G+ +E +C+A E+ +D
Sbjct: 70 --------NSLQESHKNAGLNRLDEGTKICAETGVTPRKVLEFGNPKEAICEAAEKLGVD 121
Query: 128 TLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVKGK 165
LV+GS G G++QR LGSV+NY ++NA CPV VV+ K
Sbjct: 122 MLVVGSHGKGALQRTFLGSVSNYCVNNAKCPVLVVRTK 159
>AT1G09740.1 | chr1:3154603-3155834 FORWARD LENGTH=172
Length = 171
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 15 VAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGGEEAKHALWGKSGSPLIPL---SE 71
VA+D S S AL WA+ NL A G+ IP S
Sbjct: 12 VAVDGSEVSMEALRWALDNLKLSSSSSDSSFVVLHVQPSPSVAAGVSPGT--IPFGGPSG 69
Query: 72 FRDPT---AMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDAVEEQKIDT 128
P A++Q+ +L+ + + V ++ GD + K+C+AVE D
Sbjct: 70 LEVPAFTAAIEQHQKRITDTILEHASQICAEKSVNVKTQVVIGDPKYKICEAVENLHADL 129
Query: 129 LVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVKGK 165
LVMGSR G I+R+ LGSV+NY ++A CPV ++K K
Sbjct: 130 LVMGSRAYGRIKRMFLGSVSNYCTNHAHCPVVIIKPK 166
>AT3G62550.1 | chr3:23136194-23137074 FORWARD LENGTH=163
Length = 162
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 10 ERRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGGEEAKHAL----WGKSGSP 65
ER+I VA+D S S AL W++ NL G +L + +G P
Sbjct: 6 ERKIVVAVDESEESMEALSWSLDNLFPYGSNNTLILLYVKPPLPVYSSLDAAGFIVTGDP 65
Query: 66 LIPLSEFRDPTAMQQYGVHCDAEVLDMLDTAARQLE--LTVVAKLYWGDAREKLCDAVEE 123
+ A+++Y V+ T + E + + ++ GDA+E +C+AV++
Sbjct: 66 V---------AALKKYEYELVESVMARSRTVYQDYESDINIERRVGRGDAKEVICNAVQK 116
Query: 124 QKIDTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVKGK 165
++D LVMG+ G +R LLGSV+ Y CPV +VK +
Sbjct: 117 LRVDMLVMGTHDYGFFKRALLGSVSEYCAKRVKCPVVIVKKQ 158
>AT1G11360.1 | chr1:3822171-3822899 REVERSE LENGTH=243
Length = 242
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 10 ERRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGGEEAKHALWGKSGSPLIPL 69
+R+IG+A+D S S A+ WA+ N LR GD + L+G + L
Sbjct: 37 QRKIGIAVDLSDESAYAVQWAVQNYLRSGDAVVLLHV------QPTSVLYGADWG-AMDL 89
Query: 70 SEFRDPTAMQ-QYGVHCDAEVL---DMLDTAARQLELTVVAKLYW---GDAREKLCDAVE 122
S DP + Q + D +++ D A +E + K++ D +E+LC VE
Sbjct: 90 SPQWDPNNEESQRKLEDDFDIVTNKKASDVAQPLVEADIPFKIHIVKDHDMKERLCLEVE 149
Query: 123 EQKIDTLVMGSRGLGSIQRI---LLGSVTNYVLSNASCPVTVVK 163
+ TL+MGSRG G+ +R LGSV++Y + + +CPV VV+
Sbjct: 150 RLGLSTLIMGSRGFGATKRSSKGRLGSVSDYSVHHCACPVVVVR 193
>AT3G58450.1 | chr3:21622032-21623057 FORWARD LENGTH=205
Length = 204
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 111 GDAREKLCDAVEEQKIDTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVK 163
GD +E +C AVE+ +D LV+GSRGLG I+R LGSV++Y +A CP+ +V+
Sbjct: 136 GDPKEMICQAVEQTHVDLLVVGSRGLGMIKRAFLGSVSDYCAQHAKCPILIVR 188
>AT3G01520.1 | chr3:208506-209921 FORWARD LENGTH=176
Length = 175
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 20 SASSKRALDWAIANLLRRG--DXXXXXXXXXXGGEEAKHALWGKSGSPLIPLSEFRDPTA 77
S S KRA +W + ++R D E+ + SP +FRD
Sbjct: 24 SISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDGFDDVDSIYASP----EDFRD--- 76
Query: 78 MQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDAVEEQKIDTLVMGSRGLG 137
M+Q +L+ ++ + A + GD ++ +C V+ + D LV+GSRGLG
Sbjct: 77 MRQSNKAKGLHLLEFFVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLG 136
Query: 138 SIQRILLGSVTNYVLSNASCPVTVVK 163
Q++ +G+V+ + + +A CPV +K
Sbjct: 137 RFQKVFVGTVSAFCVKHAECPVMTIK 162
>AT2G47710.1 | chr2:19555045-19555956 REVERSE LENGTH=163
Length = 162
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 105 VAKLYWGDAREKLCDAVEEQKIDTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVK 163
V +++ GDAR LC+ V++ LV+GS G G+I+R +LGS ++Y +A C V +VK
Sbjct: 98 VIEVFEGDARNILCEVVDKHHASILVVGSHGYGAIKRAVLGSTSDYCAHHAHCSVMIVK 156
>AT5G14680.1 | chr5:4731620-4733025 REVERSE LENGTH=176
Length = 175
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 111 GDAREKLCDAVEEQKIDTLVMGSRGLGSIQRILLGSVTNYVLSNASCPVTVVK 163
GD E +C V + D LV+GSRGLG Q++ +G+V+ + + +A CPV +K
Sbjct: 110 GDPTELICHEVRRVRPDFLVVGSRGLGPFQKVFVGTVSEFCVKHAECPVITIK 162
>AT5G54430.1 | chr5:22097563-22099693 REVERSE LENGTH=243
Length = 242
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 11 RRIGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGGEEAKHALWGKSGSPLIPLS 70
R+IGVA+D S S A+ WA+ + +R GD L+G PL +
Sbjct: 48 RKIGVAVDLSEESSFAVRWAVDHYIRPGDAVVLLHVSPTS------VLFGADWGPLPLKT 101
Query: 71 EFRDPTAMQQ-----YGVHCDAEVLDMLDTAARQL-ELTVVAKLYW---GDAREKLCDAV 121
+ DP A Q + +V D+ A+ L EL K++ D RE+LC +
Sbjct: 102 QIEDPNAQPQPSQEDFDAFTSTKVADL----AKPLKELGFPYKIHIVKDHDMRERLCLEI 157
Query: 122 EEQKIDTLVMGSRGLGSIQRI----LLGSVTNY 150
E + ++MGSRG G+ ++ LGSV++Y
Sbjct: 158 ERLGLSAVIMGSRGFGAEKKRGSDGKLGSVSDY 190
>AT3G11930.3 | chr3:3776371-3777393 FORWARD LENGTH=227
Length = 226
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 26/79 (32%)
Query: 111 GDAREKLCDAVEEQKIDTLVMGSRGLGSIQRI--------------------------LL 144
G+A+E +C+AVE+ +D LV+GSRGLG I+R L
Sbjct: 141 GEAKEMICEAVEKMHVDLLVVGSRGLGKIKRYCIINNFFLYINLSAYYFVCFVRFGRAFL 200
Query: 145 GSVTNYVLSNASCPVTVVK 163
GSV++Y +A+CP+ +VK
Sbjct: 201 GSVSDYCAHHANCPILIVK 219
>AT2G21620.2 | chr2:9248749-9249986 FORWARD LENGTH=194
Length = 193
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 13 IGVAMDYSASSKRALDWAIANLLRRGDXXXXXXXXXXGGEEAKHALWGKSGSPLIPLSEF 72
+ VA+D+ +SK A DWA+ + R D H + S S F
Sbjct: 42 VIVAVDHGPNSKHAFDWALVHFCRLADTL--------------HLVHAVSSS-------F 80
Query: 73 RDPTAMQQYGVHCDAEVLDMLDTAARQLELT-VVAKLYWGDAREKLCDAVEEQKIDTLVM 131
+++ L A Q+ + VA++ GDA + +C E+ K +++
Sbjct: 81 SLQCVKNDVVYETSQALMEKLAVEAYQVAMVKSVARVVEGDAGKVICKEAEKVKPAAVIV 140
Query: 132 GSRGLGSIQRILLGSVTNYVLSNA-SCPVTVVKGK 165
G+RG ++ +L GSV+ Y N S PV +V GK
Sbjct: 141 GTRGRSLVRSVLQGSVSEYCFHNCKSAPVIIVPGK 175
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.134 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,162,302
Number of extensions: 106962
Number of successful extensions: 272
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 265
Number of HSP's successfully gapped: 15
Length of query: 165
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 74
Effective length of database: 8,611,713
Effective search space: 637266762
Effective search space used: 637266762
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 108 (46.2 bits)