BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0430300 Os05g0430300|AK121670
(640 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0430300 Protein of unknown function DUF668 family protein 1253 0.0
Os06g0716000 Protein of unknown function DUF668 family protein 437 e-122
Os02g0551700 Protein of unknown function DUF668 family protein 270 2e-72
Os01g0873900 Conserved hypothetical protein 144 3e-34
Os04g0433600 Protein of unknown function DUF668 family protein 136 5e-32
Os11g0180100 Conserved hypothetical protein 127 3e-29
Os04g0169500 Protein of unknown function DUF668 family protein 80 5e-15
>Os05g0430300 Protein of unknown function DUF668 family protein
Length = 640
Score = 1253 bits (3242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/640 (95%), Positives = 613/640 (95%)
Query: 1 MGGLCSKVSAVDKSPSDTTLVRDQIVDPEPALTKRAKSPVVEEATAKRVEDQQQSFAFLE 60
MGGLCSKVSAVDKSPSDTTLVRDQIVDPEPALTKRAKSPVVEEATAKRVEDQQQSFAFLE
Sbjct: 1 MGGLCSKVSAVDKSPSDTTLVRDQIVDPEPALTKRAKSPVVEEATAKRVEDQQQSFAFLE 60
Query: 61 SVVPGLAVYNGADAGQAGSRTPQLARTLSQXXXXXXXXXXXXXVSEVSSLLGRAGTVGLG 120
SVVPGLAVYNGADAGQAGSRTPQLARTLSQ VSEVSSLLGRAGTVGLG
Sbjct: 61 SVVPGLAVYNGADAGQAGSRTPQLARTLSQKAGLGKTKAGAAKVSEVSSLLGRAGTVGLG 120
Query: 121 KAVEVLDXXXXXXXXXXXXXXFISAAKGDKISILAFEVANTIVKGSNLMRALSKTNIKHL 180
KAVEVLD FISAAKGDKISILAFEVANTIVKGSNLMRALSKTNIKHL
Sbjct: 121 KAVEVLDTLGSSMSSLNTSSGFISAAKGDKISILAFEVANTIVKGSNLMRALSKTNIKHL 180
Query: 181 KEVVLYSEGVQHLISKDMDELHKIAATDKREELEIFSKEVVRFGNRCKNPQWHSLDRYFE 240
KEVVLYSEGVQHLISKDMDELHKIAATDKREELEIFSKEVVRFGNRCKNPQWHSLDRYFE
Sbjct: 181 KEVVLYSEGVQHLISKDMDELHKIAATDKREELEIFSKEVVRFGNRCKNPQWHSLDRYFE 240
Query: 241 KLASERTPQHRLKEDAESVMQQLIICVQYTAELYHELHTLDRFEQDCRRKQQELDGLGSR 300
KLASERTPQHRLKEDAESVMQQLIICVQYTAELYHELHTLDRFEQDCRRKQQELDGLGSR
Sbjct: 241 KLASERTPQHRLKEDAESVMQQLIICVQYTAELYHELHTLDRFEQDCRRKQQELDGLGSR 300
Query: 301 GDSLHMLKQDVKSQTKHVKSLKKRSLWSKNLEEVMEKLVDIVHFLHLEINNAFGLADSEA 360
GDSLHMLKQDVKSQTKHVKSLKKRSLWSKNLEEVMEKLVDIVHFLHLEINNAFGLADSEA
Sbjct: 301 GDSLHMLKQDVKSQTKHVKSLKKRSLWSKNLEEVMEKLVDIVHFLHLEINNAFGLADSEA 360
Query: 361 PQEPAKHHNRLGPAGLALHYANIINQIDTLVSRSSLIPPTTRDTLYQGLPLTIKSALRSK 420
PQEPAKHHNRLGPAGLALHYANIINQIDTLVSRSSLIPPTTRDTLYQGLPLTIKSALRSK
Sbjct: 361 PQEPAKHHNRLGPAGLALHYANIINQIDTLVSRSSLIPPTTRDTLYQGLPLTIKSALRSK 420
Query: 421 LQSFELKEELTASQIKAEMEKTLRWLVPIANNTTKAHHGFGWVGEWANTGSELNCKLSGQ 480
LQSFELKEELTASQIKAEMEKTLRWLVPIANNTTKAHHGFGWVGEWANTGSELNCKLSGQ
Sbjct: 421 LQSFELKEELTASQIKAEMEKTLRWLVPIANNTTKAHHGFGWVGEWANTGSELNCKLSGQ 480
Query: 481 MDLTRIETLYHAEKEKVDGHILELVVWLHHLISKSKNANGGVRSPIKSPVRSPTQKGITL 540
MDLTRIETLYHAEKEKVDGHILELVVWLHHLISKSKNANGGVRSPIKSPVRSPTQKGITL
Sbjct: 481 MDLTRIETLYHAEKEKVDGHILELVVWLHHLISKSKNANGGVRSPIKSPVRSPTQKGITL 540
Query: 541 MPDKSNSSSPILTQEDKDMLKNVKFRKFVPGISKSQEFDTKSRHSKQIRLIKSNSQSPTS 600
MPDKSNSSSPILTQEDKDMLKNVKFRKFVPGISKSQEFDTKSRHSKQIRLIKSNSQSPTS
Sbjct: 541 MPDKSNSSSPILTQEDKDMLKNVKFRKFVPGISKSQEFDTKSRHSKQIRLIKSNSQSPTS 600
Query: 601 GSRKDMLSLRRSSMLPVIDFQMDRTKALDLIDRLDGLKKQ 640
GSRKDMLSLRRSSMLPVIDFQMDRTKALDLIDRLDGLKKQ
Sbjct: 601 GSRKDMLSLRRSSMLPVIDFQMDRTKALDLIDRLDGLKKQ 640
>Os06g0716000 Protein of unknown function DUF668 family protein
Length = 597
Score = 437 bits (1124), Expect = e-122, Method: Compositional matrix adjust.
Identities = 261/553 (47%), Positives = 355/553 (64%), Gaps = 40/553 (7%)
Query: 104 VSEVSSLLGRAGTVGLGKAVEVLDXXXXXXXXXXXXXXFISAA--KGDKISILAFEVANT 161
V E +LLGRA AVEVLD F+S +G+++ ILAFEVANT
Sbjct: 55 VPETGTLLGRASIA----AVEVLDTLGSSMTNLNHGSGFLSGGTNRGNRVCILAFEVANT 110
Query: 162 IVKGSNLMRALSKTNIKHLKEVVLYSEGVQHLISKDMDELHKIAATDKREELEIFSKEVV 221
I K SNL R+ S T+IK LKE +L S+GVQ L+S + EL IA DKR+EL+IFS+EV+
Sbjct: 111 IAKASNLWRSCSDTSIKELKEEILRSDGVQILVSSNSSELLYIAYVDKRDELDIFSREVI 170
Query: 222 RFGNRCKNPQWHSLDRYFEKLASERTPQHRLKEDAESVMQQLIICVQYTAELYHELHTLD 281
RFGN CK+P WH+L RYF KL ++ PQ KE E+ +QQLI Q T+ELYHELH LD
Sbjct: 171 RFGNLCKDPTWHNLGRYFNKLTTDFAPQDHSKEHMETTIQQLINLAQNTSELYHELHALD 230
Query: 282 RFEQDCRRKQQELDGL-GSRGDSLHMLKQDVKSQTKHVKSLKKRSLWSKNLEEVMEKLVD 340
RFEQD +RK E + + +R +S+ +L ++K Q K VK+LKK+SLWS+ LE ++EKLVD
Sbjct: 231 RFEQDFQRKFHEEESVPAARRESVMILHSELKRQRKLVKTLKKKSLWSRTLETIVEKLVD 290
Query: 341 IVHFLHLEINNAFG--------LADSEAPQEPAKHHNRLGPAGLALHYANIINQIDTLVS 392
IV FLH +I ++F L +SE Q + RLG GLALHYANIINQI+ +VS
Sbjct: 291 IVVFLHKQIRDSFSEAVSVGADLFNSEQAQ-----NKRLGSCGLALHYANIINQIENIVS 345
Query: 393 RSSLIPPTTRDTLYQGLPLTIKSALRSKLQSFELKEELTASQIKAEMEKTLRWLVPIANN 452
R +PP+ RD LY GLP+T+KSALRS+LQS +EE T +QIKAEM+KTLRW++PIA N
Sbjct: 346 RPLSLPPSARDNLYHGLPVTVKSALRSRLQSVNAQEERTVAQIKAEMQKTLRWILPIAEN 405
Query: 453 TTKAHHGFGWVGEWANTGSELNCKLSGQMDLTRIETLYHAEKEKVDGHILELVVWLHHLI 512
T +AH GFGWVGEWAN G E+N K Q+ +TR++TL++A+K K + ++L+LVV LHHL+
Sbjct: 406 TIRAHQGFGWVGEWANLGCEMNKKSGSQLSITRVQTLHYADKAKTEQYMLDLVVLLHHLV 465
Query: 513 SKSKNANGGVRSPIKSPVRSPTQKGITLMPDKSNSSSPI--------LTQEDKDMLKNVK 564
+ KN G +S RS +KG+ L P+ ++SP+ L++ +++ L ++
Sbjct: 466 VQVKNRGYGSKSSKHDQSRS--RKGMDLQPESKLNTSPVNNATYPSPLSESERETLDHLS 523
Query: 565 FRKFVPGISKSQEFDTKSRHSKQIRLIKSNSQSPTSGSRKDMLSLRRSSMLPVIDFQMDR 624
F++ G SKS E +R K R S +S +R+ R+S ++D+
Sbjct: 524 FKRTGYGRSKSCE-PPPNRGKKAHRTWDSCRSHGSSPARE----FGRNSA-----SELDK 573
Query: 625 TKALDLIDRLDGL 637
T LD+ID LD L
Sbjct: 574 TMDLDVIDGLDRL 586
>Os02g0551700 Protein of unknown function DUF668 family protein
Length = 349
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/341 (45%), Positives = 208/341 (60%), Gaps = 43/341 (12%)
Query: 331 LEEVMEKLVDIVHFLHLEINNAFGLADSEAP-QEPAKHHNRLGPAGLALHYANIINQIDT 389
LE+VM+KLVDIVHFLH+EI +FG D +P++ LG AGL+LHYANII+QID
Sbjct: 2 LEDVMDKLVDIVHFLHVEIQESFGTYDGALQLNQPSESRQTLGSAGLSLHYANIISQIDN 61
Query: 390 LVSRSSLIPPTTRDTLYQGLPLTIKSALRSKLQSFELKEELTASQIKAEMEKTLRWLVPI 449
+VSRS++ P +TRD LYQGLP TIKSALR KL + +E+ ++I++ ME+TL+W++PI
Sbjct: 62 IVSRSTVPPQSTRDALYQGLPPTIKSALRKKLHNCPQPQEVPITEIRSSMERTLQWIIPI 121
Query: 450 ANNTTKAHHGFGWVGEWANTGSELNCKLSGQMDLTRIETLYHAEKEKVDGHILELVVWLH 509
ANNT +AHHGFGWVGEWANTG++ + +GQ D+ +IET YHA+K K + IL+LV+WLH
Sbjct: 122 ANNTARAHHGFGWVGEWANTGNDAMRRAAGQPDVIKIETFYHADKAKTEACILDLVLWLH 181
Query: 510 HLISKSKNANGG-VRSPIKSPVRSP--------------TQKGITLMPDKSNSSSPILTQ 554
HLIS S+ +NGG RSP +SPVRSP + + S + LT+
Sbjct: 182 HLISYSRPSNGGRSRSPSRSPVRSPPLTPPHQVPTTTSSSSPPPPAVARPSGGTGGGLTR 241
Query: 555 EDKDMLKNVKF--RKFVPGISKSQEFDTKSRH-----------------SKQIRLIKSNS 595
ED+ ML++V R+ P S+SQE + SK RL KS++
Sbjct: 242 EDRAMLQDVYAGRRRRAPCHSRSQELSSARGGGGAGGDSSSAVAAAAQLSKNDRLSKSSN 301
Query: 596 QSPTSGSRKDM------LSLRRSSML--PVIDFQMDRTKAL 628
+P LS R SS + P +DF +D KAL
Sbjct: 302 DAPARSGGGGGGGKLFPLSRRPSSAVVSPAVDFDIDGIKAL 342
>Os01g0873900 Conserved hypothetical protein
Length = 130
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/112 (71%), Positives = 85/112 (75%), Gaps = 2/112 (1%)
Query: 104 VSEVSSLLGRAGTVGLGKAVEVLDXXXXXXXXXXXXXXFISAA--KGDKISILAFEVANT 161
VSEVSS+LGRA TVGLGKAVEVLD F S KG+KISILAFEVANT
Sbjct: 9 VSEVSSILGRASTVGLGKAVEVLDTLGSSMANLNINSGFGSGTTTKGNKISILAFEVANT 68
Query: 162 IVKGSNLMRALSKTNIKHLKEVVLYSEGVQHLISKDMDELHKIAATDKREEL 213
IVKG NLMRALSK +IKHLKEVVL+SEGVQ+LISKDMDEL KI A DKR L
Sbjct: 69 IVKGCNLMRALSKESIKHLKEVVLHSEGVQNLISKDMDELLKIYAADKRLAL 120
>Os04g0433600 Protein of unknown function DUF668 family protein
Length = 166
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 91/125 (72%), Gaps = 3/125 (2%)
Query: 391 VSRSSLIPPTTRDTLYQGLPLTIKSALRSKLQSFELKEELTASQIKAEMEKTLRWLVPIA 450
VSRS IPP TRD LYQGLP ++SAL ++L++ + +EL QI+A M+KTL+WLVP+A
Sbjct: 16 VSRSGYIPPNTRDALYQGLPPRVRSALPNRLRTSSVPQELNIDQIRATMDKTLKWLVPMA 75
Query: 451 NNTTKAHHGFGWVGEWANTGSELNCKLSGQMDLTRIETLYHAEKEKVDGHILELVVWLHH 510
NTT A GF EWA +G+E + GQ D+ +ETLYHA+K K + +IL+LVVWLHH
Sbjct: 76 INTTCA-RGFLRFSEWARSGTERVGRRPGQPDV--VETLYHADKAKTEDYILDLVVWLHH 132
Query: 511 LISKS 515
L+++S
Sbjct: 133 LVNQS 137
>Os11g0180100 Conserved hypothetical protein
Length = 312
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 105/188 (55%), Gaps = 7/188 (3%)
Query: 142 FISAAKGDKISILAFEVANTIVKGSNLMRALSKTNIKHLKEVVLYSEGVQHLISKDMDEL 201
+I+ KG KI ILAFEVANTI GSNLM LS+ NI++LK VVL ++GVQ LIS D +L
Sbjct: 131 YIATKKGRKIKILAFEVANTIAMGSNLMNFLSEENIRYLKRVVLQNQGVQSLISDDQSQL 190
Query: 202 HKIAATDKREELEIFSKEVVRFGNRCKNPQWHSLDRYFEKLASERTPQHRLKEDAESVMQ 261
+ + R++ + F+ V R GN C++P+WH+L+ +F L Q E A S M+
Sbjct: 191 LALVGDEIRQQFKDFAASVARLGNMCRDPKWHNLEGHFSGLEYGPITQEYSHEKAASKME 250
Query: 262 QLIICVQYTAELYHELHTLDRFEQDCRRKQQELDGLGSRGDSLHMLKQDVKSQTKHVKSL 321
L+ V T L+ L L E+ R +Q G L + V + + V+S
Sbjct: 251 DLMELVTKTKILFEALRRLGVSEKMYREAKQ-------TGMPLETFQNAVNIEKEIVQSA 303
Query: 322 KKRSLWSK 329
KK++LW K
Sbjct: 304 KKKALWVK 311
>Os04g0169500 Protein of unknown function DUF668 family protein
Length = 514
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 371 LGPAGLALHYANIINQIDTLVSRSSLIPPTTRDTLYQGLPLTIKSALRSKLQSF----EL 426
+G + LALHYANI+ I+ L+ L+ RD LYQ LP ++++ALR L+++ +
Sbjct: 352 IGGSALALHYANIVIIIEKLLRYPHLVGEEARDDLYQMLPSSLRAALRKSLKTYVKSMAI 411
Query: 427 KEELTASQIKAEMEKTLRWLVPIANNTTKAHHGFGWVGEWANTGSELNCKLSGQMDLTRI 486
+ A + +EKTL WL P+A+N + W E + L G + L +
Sbjct: 412 YDAFLAHDWRETLEKTLTWLAPMAHNMIR------WQAE--RNFEQQQIVLKGNVLL--L 461
Query: 487 ETLYHAEKEKVDGHILELVVWLHHLISKSKNANG 520
+TLY A++EK + I EL+V L+++ + N
Sbjct: 462 QTLYFADREKTEAVICELLVGLNYICRYEQQQNA 495
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.130 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,445,585
Number of extensions: 769773
Number of successful extensions: 2000
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1992
Number of HSP's successfully gapped: 7
Length of query: 640
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 533
Effective length of database: 11,448,903
Effective search space: 6102265299
Effective search space used: 6102265299
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 159 (65.9 bits)