Os11g0180100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0180100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.83 | 0.311 | 2.69 | 0.523 | 0.0179 | -38.8 | 0.281 | 101 | 0.111 | 2.38 | 46 | 166 | -- | -- |
| 51.12 | 0.333 | 2.93 | -0.0143 | 0.00735 | 0.249 | 0.151 | -- | 0.106 | 22.2 | 43.99 | 688 | -- | -- |
| 43.64 | 0.308 | 2.69 | 0.52 | 0.047 | -39.1 | -- | 102 | 0.116 | 3.86 | 44.98 | 157 | -- | -- |
| 46.42 | 0.317 | 2.92 | -0.00115 | 0.0263 | 1.73 | -- | -- | 0.128 | 21.5 | 46.01 | 158 | -- | -- |
| 42.86 | 0.305 | 2.56 | 0.902 | -- | -40.3 | -- | 105 | 0.117 | -- | 43.15 | 135 | -- | -- |
| 51.23 | 0.336 | 2.93 | -0.00284 | 0.0176 | -- | 0.201 | -- | 0.106 | 20.8 | -- | -- | -- | -- |
| 51.35 | 0.336 | 2.93 | -0.00886 | 0.0244 | -- | -- | -- | 0.106 | 18.1 | -- | -- | -- | -- |
| 46.16 | 0.316 | 2.92 | -0.0544 | -- | 1.82 | -- | -- | 0.121 | -- | 46 | 175 | -- | -- |
| 46.28 | 0.317 | 2.93 | -- | 0.0193 | 1.82 | -- | -- | 0.12 | 21.4 | 46 | 175 | -- | -- |
| 51.38 | 0.335 | 2.93 | -0.00955 | -- | -- | -- | -- | 0.105 | -- | -- | -- | -- | -- |
| 51.35 | 0.335 | 2.93 | -- | 0.0245 | -- | -- | -- | 0.107 | 18.1 | -- | -- | -- | -- |
| 46.3 | 0.317 | 2.93 | -- | -- | 1.82 | -- | -- | 0.12 | -- | 46 | 175 | -- | -- |
| 51.38 | 0.335 | 2.93 | -- | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.35 | humidity | 50 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 2 | 42.36 | humidity | 50 | 10 | < th | dose independent | rect. | 15 | 1 |
| 3 | 42.36 | humidity | 50 | 90 | < th | dose independent | rect. | 15 | 1 |
| 46 | 42.37 | wind | 1 | 30 | < th | dose independent | rect. | 15 | 1 |
| 85 | 42.37 | wind | 1 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 213 | 42.63 | humidity | 50 | 90 | < th | dose dependent | sin | 12 | NA |
| 214 | 42.88 | humidity | 50 | 90 | < th | dose independent | sin | 12 | NA |
| 215 | 43.00 | humidity | 50 | 90 | > th | dose independent | sin | 12 | NA |
| 266 | 44.70 | temperature | 30 | 30 | > th | dose independent | rect. | 15 | 1 |
| 335 | 45.21 | temperature | 30 | 90 | > th | dose independent | rect. | 14 | 21 |
| 337 | 45.23 | temperature | 30 | 90 | > th | dose independent | rect. | 14 | 5 |
| 397 | 45.59 | temperature | 30 | 90 | > th | dose independent | sin | 15 | NA |
| 413 | 45.61 | temperature | 30 | 90 | < th | dose independent | sin | 15 | NA |
| 632 | 46.23 | humidity | 50 | 270 | < th | dose dependent | sin | 7 | NA |
| 813 | 46.57 | humidity | 50 | 270 | < th | dose dependent | no | NA | NA |
| 986 | 46.62 | temperature | 30 | 90 | > th | dose independent | rect. | 10 | 23 |