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Os01g0873900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0199) R2 : 0.496
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.26 (0.0644) R2dC : 0.661 R2C : 0.0768
β3 : -1.2 (0.0851) R2dE : 0.358 R2E : -0.18
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.187 (0.0424) R2dN8 : 0.0292 R2N8 : 0.0461
σ : 0.37
deviance : 63.25
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C
peak time of C : 17.6
E
wheather : temperature
threshold : 43.05
memory length : 243
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8.03
open length of G : 17.3

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.41 0.313 11.3 -0.748 1.3 -1.29 1.17 1.18 0.0627 17.6 41.13 238 8.02 16.9
46.61 0.318 11.3 -0.608 1.33 -1.31 1.41 -- 0.0984 17.7 44.21 235 8.03 17.4
45.68 0.315 11.3 -0.796 1.54 -1.39 -- 2.04 0.0668 17.6 49.38 253 8.03 16.5
54.02 0.342 11.3 -0.615 1.22 -1.36 -- -- 0.104 17.7 39.09 253 8 17.2
72.46 0.396 11.3 -0.528 -- -1.64 -- -1.53 0.106 -- 56 946 8.92 18.7
76.53 0.41 11.2 -0.389 0.723 -- 1.9 -- 0.258 17.1 -- -- -- --
84.69 0.431 11.2 -0.385 0.74 -- -- -- 0.268 16.5 -- -- -- --
71.57 0.394 11.3 -0.68 -- -1.73 -- -- 0.0948 -- 62.89 864 8.02 20.9
63.25 0.37 11.3 -- 1.26 -1.2 -- -- 0.187 17.6 43.05 243 8.03 17.3
113.97 0.499 11.2 -0.414 -- -- -- -- 0.248 -- -- -- -- --
88.59 0.44 11.2 -- 0.747 -- -- -- 0.311 16.4 -- -- -- --
82.16 0.422 11.2 -- -- -1.39 -- -- 0.194 -- 76.26 910 8.02 20.6
118.48 0.508 11.2 -- -- -- -- -- 0.294 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.56 temperature 30.0 270 < th dose independent rect. 8 16
7 50.02 temperature 30.0 270 < th dose dependent rect. 8 17
13 50.84 temperature 10.0 270 > th dose dependent rect. 11 9
16 51.20 precipitation 0.1 270 < th dose independent rect. 8 16
17 51.20 precipitation 0.1 270 < th dose dependent rect. 8 16
18 51.25 humidity 50.0 270 > th dose independent rect. 8 16
19 51.27 atmosphere 995.0 270 > th dose independent rect. 8 16
21 51.47 radiation 30.0 270 < th dose independent rect. 24 8
23 51.54 atmosphere 1015.0 270 < th dose independent rect. 24 8
24 51.55 temperature 10.0 270 > th dose independent rect. 24 8
26 51.55 temperature 30.0 270 < th dose independent rect. 24 8
27 51.55 humidity 50.0 270 > th dose independent rect. 24 8
29 51.55 atmosphere 995.0 270 > th dose independent rect. 24 8
30 51.55 temperature 10.0 270 > th dose independent rect. 8 16
31 51.56 wind 9.0 270 < th dose independent rect. 24 8
36 51.64 precipitation 0.1 270 < th dose independent rect. 24 8
37 51.64 precipitation 0.1 270 < th dose dependent rect. 24 8
54 52.46 wind 1.0 270 > th dose independent rect. 8 16
73 52.71 humidity 50.0 270 > th dose dependent rect. 24 8
97 53.32 radiation 40.0 270 < th dose dependent rect. 24 8
99 53.35 wind 9.0 270 < th dose independent rect. 8 16
123 53.67 temperature 30.0 270 < th dose independent rect. 19 17
126 53.69 atmosphere 995.0 90 > th dose dependent rect. 9 18
142 53.78 atmosphere 1015.0 270 < th dose dependent rect. 1 7
201 54.51 wind 9.0 270 < th dose dependent rect. 24 8
206 54.57 wind 9.0 270 < th dose independent rect. 11 8
209 54.62 atmosphere 1010.0 270 < th dose independent rect. 11 8
214 54.67 temperature 10.0 270 > th dose dependent rect. 12 20
220 54.78 atmosphere 995.0 10 > th dose dependent rect. 10 17
243 55.15 temperature 15.0 270 > th dose independent rect. 11 8
264 55.28 atmosphere 1015.0 90 < th dose dependent rect. 3 6
266 55.30 precipitation 0.1 270 < th dose independent rect. 19 16
267 55.30 precipitation 0.1 270 < th dose dependent rect. 19 16
281 55.48 humidity 60.0 90 > th dose independent rect. 3 6
291 55.53 radiation 40.0 90 < th dose independent rect. 3 6
295 55.54 temperature 10.0 270 > th dose independent rect. 19 16
296 55.54 atmosphere 995.0 270 > th dose independent rect. 19 16
298 55.56 wind 9.0 90 < th dose independent rect. 3 6
299 55.56 temperature 10.0 90 > th dose independent rect. 3 6
302 55.56 atmosphere 995.0 90 > th dose independent rect. 3 6
325 55.62 wind 1.0 270 > th dose independent rect. 11 8
327 55.63 temperature 10.0 270 > th dose dependent rect. 24 8
343 55.75 humidity 50.0 270 > th dose independent rect. 19 16
344 55.77 wind 9.0 270 < th dose independent rect. 19 16
346 55.78 radiation 1.0 270 > th dose independent rect. 12 19
350 55.81 temperature 10.0 270 > th dose dependent rect. 2 17
357 55.86 precipitation 0.1 270 < th dose independent rect. 11 8
360 55.86 precipitation 0.1 270 < th dose dependent rect. 11 8
401 56.03 temperature 10.0 270 > th dose dependent rect. 24 22
428 56.21 atmosphere 1015.0 270 < th dose dependent rect. 1 18
498 56.60 humidity 90.0 270 < th dose independent rect. 11 8
505 56.63 temperature 15.0 10 > th dose dependent rect. 14 19
560 56.89 radiation 1.0 90 > th dose independent sin 13 NA
561 56.89 atmosphere 1015.0 270 < th dose dependent rect. 11 8
612 57.02 wind 1.0 270 > th dose independent rect. 24 8
616 57.03 atmosphere 995.0 10 > th dose independent rect. 10 17
657 57.18 temperature 30.0 270 < th dose independent rect. 17 10
674 57.26 atmosphere 1010.0 270 < th dose independent rect. 1 18
682 57.29 temperature 10.0 270 > th dose dependent sin 20 NA
701 57.36 wind 1.0 270 > th dose independent rect. 1 6
710 57.39 radiation 40.0 10 < th dose independent rect. 3 7
775 57.59 temperature 30.0 270 < th dose dependent sin 19 NA
780 57.61 humidity 60.0 10 > th dose independent rect. 3 7
794 57.64 humidity 50.0 1440 > th dose independent rect. 4 6
805 57.66 atmosphere 1015.0 270 < th dose independent rect. 8 16
820 57.70 radiation 10.0 270 < th dose dependent rect. 17 10
854 57.79 precipitation 0.1 10 < th dose independent rect. 10 17
857 57.79 precipitation 0.1 10 < th dose dependent rect. 10 17
868 57.84 wind 9.0 10 < th dose independent rect. 3 7
869 57.84 temperature 10.0 10 > th dose independent rect. 3 7
872 57.84 atmosphere 995.0 10 > th dose independent rect. 3 7
873 57.84 atmosphere 1015.0 10 < th dose independent rect. 3 7
874 57.84 temperature 10.0 10 > th dose independent rect. 10 17
896 57.91 humidity 60.0 270 > th dose independent rect. 17 10
922 57.99 temperature 30.0 10 < th dose independent rect. 3 6
932 58.01 temperature 10.0 1440 > th dose independent rect. 4 6
936 58.01 atmosphere 995.0 1440 > th dose independent rect. 4 6
937 58.01 atmosphere 1015.0 1440 < th dose independent rect. 4 6
938 58.01 temperature 10.0 1440 > th dose independent rect. 10 18
950 58.05 precipitation 0.1 10 < th dose independent rect. 3 7
954 58.05 precipitation 0.1 10 < th dose dependent rect. 3 7