Os05g0430300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF668 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0430300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF668 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.55 | 0.268 | 10.3 | 0.182 | 0.528 | -0.821 | 0.0221 | 0.786 | 0.311 | 0.262 | 22.6 | 674 | -- | -- |
| 33.3 | 0.269 | 10.3 | 0.272 | 0.528 | -0.909 | -0.0247 | -- | 0.345 | 0.15 | 22.4 | 692 | -- | -- |
| 32.55 | 0.266 | 10.3 | 0.183 | 0.528 | -0.822 | -- | 0.778 | 0.311 | 0.259 | 22.6 | 673 | -- | -- |
| 33.19 | 0.268 | 10.3 | 0.267 | 0.533 | -0.985 | -- | -- | 0.327 | 0.338 | 22.3 | 615 | -- | -- |
| 48.36 | 0.324 | 10.3 | 0.16 | -- | -1.12 | -- | 0.45 | 0.28 | -- | 22.8 | 842 | -- | -- |
| 43.95 | 0.311 | 10.3 | 0.506 | 0.6 | -- | -0.164 | -- | 0.464 | 23.9 | -- | -- | -- | -- |
| 44.07 | 0.311 | 10.3 | 0.513 | 0.6 | -- | -- | -- | 0.465 | 24 | -- | -- | -- | -- |
| 48.61 | 0.325 | 10.3 | 0.21 | -- | -1.22 | -- | -- | 0.288 | -- | 22.61 | 842 | -- | -- |
| 34.99 | 0.275 | 10.3 | -- | 0.543 | -1.17 | -- | -- | 0.279 | 23.8 | 22.17 | 1186 | -- | -- |
| 66.75 | 0.382 | 10.3 | 0.531 | -- | -- | -- | -- | 0.473 | -- | -- | -- | -- | -- |
| 51 | 0.334 | 10.3 | -- | 0.607 | -- | -- | -- | 0.408 | 0.000418 | -- | -- | -- | -- |
| 49.61 | 0.328 | 10.3 | -- | -- | -1.32 | -- | -- | 0.258 | -- | 22.55 | 851 | -- | -- |
| 74.19 | 0.402 | 10.3 | -- | -- | -- | -- | -- | 0.414 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.77 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 8 | 32.99 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 21 |
| 16 | 33.12 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 25 | 33.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 16 |
| 28 | 33.27 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 22 |
| 34 | 33.29 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 16 |
| 36 | 33.30 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 38 | 33.30 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 21 |
| 41 | 33.31 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 44 | 33.31 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 11 |
| 45 | 33.32 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 50 | 33.32 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 70 | 33.36 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 86 | 33.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 6 |
| 123 | 33.45 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 124 | 33.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 135 | 33.46 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 23 |
| 138 | 33.46 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 149 | 33.47 | temperature | 20 | 720 | < th | dose independent | rect. | 11 | 23 |
| 176 | 33.50 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 183 | 33.50 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 23 |
| 185 | 33.50 | humidity | 90 | 14400 | > th | dose dependent | sin | 5 | NA |
| 186 | 33.51 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 204 | 33.52 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 223 | 33.53 | temperature | 20 | 720 | < th | dose dependent | rect. | 18 | 12 |
| 265 | 33.57 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 23 |
| 370 | 33.67 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 23 |
| 373 | 33.67 | temperature | 20 | 720 | < th | dose dependent | sin | 12 | NA |
| 382 | 33.68 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 17 |
| 389 | 33.69 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 23 |
| 399 | 33.69 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 400 | 33.69 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 19 |
| 434 | 33.72 | temperature | 20 | 1440 | < th | dose dependent | sin | 7 | NA |
| 452 | 33.73 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 23 |
| 529 | 33.78 | radiation | 30 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 547 | 33.79 | radiation | 30 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 548 | 33.79 | radiation | 30 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 552 | 33.79 | radiation | 30 | 4320 | < th | dose independent | rect. | 20 | 12 |
| 575 | 33.80 | radiation | 30 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 597 | 33.81 | radiation | 30 | 4320 | < th | dose independent | rect. | 18 | 14 |
| 704 | 33.87 | humidity | 90 | 14400 | > th | dose dependent | rect. | 7 | 23 |
| 769 | 33.92 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 801 | 33.94 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 962 | 34.06 | humidity | 90 | 14400 | > th | dose dependent | sin | 13 | NA |
| 963 | 34.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 3 |