BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0428700 Os05g0428700|AK061594
(566 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0428700 Similar to Potassium channel protein ZMK2 1092 0.0
Os01g0648000 Similar to AKT1-like potassium channel 313 3e-85
Os07g0175400 Cation channel, non-ligand gated family protein 270 2e-72
Os02g0245800 Similar to Inward rectifying shaker K+ channel 206 5e-53
Os01g0210700 Similar to Potassium channel (Fragment) 193 4e-49
Os04g0445000 Similar to Potassium channel SKOR (Stelar K(+)... 186 4e-47
Os01g0756700 Similar to Potassium channel (Fragment) 184 1e-46
Os01g0718700 173 3e-43
Os06g0254200 170 3e-42
Os04g0117500 68 2e-11
>Os05g0428700 Similar to Potassium channel protein ZMK2
Length = 566
Score = 1092 bits (2823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/566 (94%), Positives = 534/566 (94%)
Query: 1 FNIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIRAASNFVGRNHLPPRLKQQILA 60
FNIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIRAASNFVGRNHLPPRLKQQILA
Sbjct: 1 FNIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIRAASNFVGRNHLPPRLKQQILA 60
Query: 61 YMCLKFRAESLNQQQLMDQLPKSICKGICEYLFLPVVKDVYLFKGVSREVLLLMVTKMKP 120
YMCLKFRAESLNQQQLMDQLPKSICKGICEYLFLPVVKDVYLFKGVSREVLLLMVTKMKP
Sbjct: 61 YMCLKFRAESLNQQQLMDQLPKSICKGICEYLFLPVVKDVYLFKGVSREVLLLMVTKMKP 120
Query: 121 EYIPPKEDVIVQNEAPDDVYIVVSGEVEVIYSDGEAEERVVATLGTRGVFGEVSALSDRP 180
EYIPPKEDVIVQNEAPDDVYIVVSGEVEVIYSDGEAEERVVATLGTRGVFGEVSALSDRP
Sbjct: 121 EYIPPKEDVIVQNEAPDDVYIVVSGEVEVIYSDGEAEERVVATLGTRGVFGEVSALSDRP 180
Query: 181 QSFXXXXXXXXXXXXXXXXXXKEAMQSKPEDSVVIIKNFLKHQIEMHDMKVEDLLGEDAA 240
QSF KEAMQSKPEDSVVIIKNFLKHQIEMHDMKVEDLLGEDAA
Sbjct: 181 QSFTLRTRTLCQLLRLRQAALKEAMQSKPEDSVVIIKNFLKHQIEMHDMKVEDLLGEDAA 240
Query: 241 GEYDHGNIPCNLLTVAATGNSSFLEDLLKVGMDPDVGDSKGRTALHIAASKGYEDCVLVL 300
GEYDHGNIPCNLLTVAATGNSSFLEDLLKVGMDPDVGDSKGRTALHIAASKGYEDCVLVL
Sbjct: 241 GEYDHGNIPCNLLTVAATGNSSFLEDLLKVGMDPDVGDSKGRTALHIAASKGYEDCVLVL 300
Query: 301 LKQACNVNIKDAQGNTALWNAIAARHHKIFNILYHFARVSSPHHAAGDLLCLAARRGDLD 360
LKQACNVNIKDAQGNTALWNAIAARHHKIFNILYHFARVSSPHHAAGDLLCLAARRGDLD
Sbjct: 301 LKQACNVNIKDAQGNTALWNAIAARHHKIFNILYHFARVSSPHHAAGDLLCLAARRGDLD 360
Query: 361 TLRELLKHGLAVDSEDRDGATALRVALAEGHADVARLLVLNGASVDRAASHNEXXXXXXV 420
TLRELLKHGLAVDSEDRDGATALRVALAEGHADVARLLVLNGASVDRAASHNE V
Sbjct: 361 TLRELLKHGLAVDSEDRDGATALRVALAEGHADVARLLVLNGASVDRAASHNEQQAAAAV 420
Query: 421 SVDELRELMKTRELAHPVTIVVDXXXXXXXXVIREVGSSGDSRNGRRQSARSDGAHWPRV 480
SVDELRELMKTRELAHPVTIVVD VIREVGSSGDSRNGRRQSARSDGAHWPRV
Sbjct: 421 SVDELRELMKTRELAHPVTIVVDSPSPAAAAVIREVGSSGDSRNGRRQSARSDGAHWPRV 480
Query: 481 SIYRGHPFVRNRSSEAGKLINLPGTMEEFRIIIEEKLKVDARKTLIMNDEGAEIDSIDVI 540
SIYRGHPFVRNRSSEAGKLINLPGTMEEFRIIIEEKLKVDARKTLIMNDEGAEIDSIDVI
Sbjct: 481 SIYRGHPFVRNRSSEAGKLINLPGTMEEFRIIIEEKLKVDARKTLIMNDEGAEIDSIDVI 540
Query: 541 RDNDKLFIVTEEHMTAVASMDSVSGS 566
RDNDKLFIVTEEHMTAVASMDSVSGS
Sbjct: 541 RDNDKLFIVTEEHMTAVASMDSVSGS 566
>Os01g0648000 Similar to AKT1-like potassium channel
Length = 935
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 178/416 (42%), Positives = 252/416 (60%), Gaps = 16/416 (3%)
Query: 1 FNIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIRAASNFVGRNHLPPRLKQQILA 60
FNIFYMLFNLGLTAYLIGNMTNLVV GT RT +R++I+AA++F RN LPPRL+ Q+++
Sbjct: 316 FNIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRNYRDTIQAATSFGVRNQLPPRLQDQMIS 375
Query: 61 YMCLKFR--AESLNQQQLMDQLPKSICKGICEYLFLPVVKDVYLFKGVSREVLLLMVTKM 118
++ LK+R +E L QQ+++D LPK+I I +YLF +V++VYLF+GVS +++ +V++M
Sbjct: 376 HISLKYRTDSEGLQQQEILDSLPKAIKSSISQYLFFHLVQNVYLFQGVSNDLIFQLVSEM 435
Query: 119 KPEYIPPKEDVIVQNEAPDDVYIVVSGEVEVIYSDGEAEERV-VATLGTRGVFGEVSALS 177
K EY PP+EDVI+QNEAP D YI+VSG VE++ A++ + VAT G V GE+ L
Sbjct: 436 KAEYFPPREDVILQNEAPTDFYILVSGSVELVEQQNGADQVIQVATSGE--VVGEIGVLC 493
Query: 178 DRPQSFXXXXXXXXXXXXXXXXXXKEAMQSKPEDSVVIIKN---FLKHQIEMHDMK--VE 232
RPQ F +QS D +I+ N FLK Q E M V+
Sbjct: 494 YRPQLFTVRTRSLCQLLRLNRTAFLSIVQSNVGDGTIIMNNLIQFLKEQKENSVMAGVVK 553
Query: 233 DLLGEDAAGEYDHGNIPCNLLTVAATGNSSFLEDLLKVGMDPDVGDSKGRTALHIAASKG 292
++ A G D +P L G+ L LLK GMDP+ D+ G TALHIAASKG
Sbjct: 554 EIESMLARGNLD---LPITLCFAVTRGDDFLLHQLLKRGMDPNESDNDGHTALHIAASKG 610
Query: 293 YEDCVLVLLKQACNVNIKDAQGNTALWNAIAARHHKIFNILYH-FARVSSPHHAAGDLLC 351
E CV +LL+ + N +D++G LW A+ +H + +L A +SS G C
Sbjct: 611 NEQCVRLLLEYGADPNARDSEGKVPLWEALCEKHAAVVQLLVEGGADLSSGD--TGLYAC 668
Query: 352 LAARRGDLDTLRELLKHGLAVDSEDRDGATALRVALAEGHADVARLLVLNGASVDR 407
+A D + L +++ +G V+ RDG TAL A+ +G+ +A LL+ +GA +D+
Sbjct: 669 IAVEESDTELLNDIIHYGGDVNRARRDGTTALHRAVCDGNVQMAELLLEHGADIDK 724
>Os07g0175400 Cation channel, non-ligand gated family protein
Length = 891
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/418 (38%), Positives = 236/418 (56%), Gaps = 32/418 (7%)
Query: 1 FNIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIRAASNFVGRNHLPPRLKQQILA 60
F YMLFNLGLTAY+IGNMTNLVV GT RT +FR+ I+AA++F R+ LP RL++Q+++
Sbjct: 285 FTTTYMLFNLGLTAYIIGNMTNLVVHGTSRTRKFRDMIQAATSFAQRHQLPARLQEQMVS 344
Query: 61 YMCLKFR--AESLNQQQLMDQLPKSICKGICEYLFLPVVKDVYLFKGVSREVLLLMVTKM 118
++ LKFR +E L+QQ+ + LPK+I I +LF +V++VYLF+GVS +++ +V++M
Sbjct: 345 HLSLKFRTNSEGLHQQETFEALPKAIKSSISHHLFFGLVQNVYLFEGVSNDLIFQLVSEM 404
Query: 119 KPEYIPPKEDVIVQNEAPDDVYIVVSGEVEVIYSDGEAEERVVATLGTRG-VFGEVSALS 177
EY P+ED+I+QNEAP D YI+VSG ++A + G V GE+ L
Sbjct: 405 NAEYFAPREDIILQNEAPADFYIIVSGS-------------MLAGMAKSGDVVGEIGVLC 451
Query: 178 DRPQSFXXXXXXXXXXXXXXXXXXKEAMQSKPEDSVVIIKNFLKHQIEMHDM-------- 229
RPQ F +QS D +++ N +++ E ++
Sbjct: 452 YRPQLFTARTRSLCQLLRLDRAAFLRIIQSNIADGTIVMNNLIQYLREKKEIASIVAVAK 511
Query: 230 KVEDLLGEDAAGEYDHGNIPCNLLTVAATGNSSFLEDLLKVGMDPDVGDSKGRTALHIAA 289
+++D+L A G+ D P L A+ G+S L LLK G+DP+ D GRTALHIAA
Sbjct: 512 EIDDML---ARGQMD---FPITLCFAASKGDSFLLHQLLKRGLDPNESDHYGRTALHIAA 565
Query: 290 SKGYEDCVLVLLKQACNVNIKDAQGNTALWNAIAARHHKIFNILYHFARVSSPHHAAGDL 349
S G E CV +LL+ + N +D +G LW A+ RH + +L S AA
Sbjct: 566 SNGNEQCVRLLLENGADSNSRDPEGRVPLWEALCRRHQTVVQLLVDAGADLSGGDAA-PY 624
Query: 350 LCLAARRGDLDTLRELLKHGLAVDSE-DRDGATALRVALAEGHADVARLLVLNGASVD 406
+A + D L E+++HG V DG TAL A+ +G+ +ARLL+ +GA D
Sbjct: 625 ARVAVEQNDAALLGEIVRHGGDVSGACSGDGTTALHRAVLDGNVQMARLLLEHGADAD 682
>Os02g0245800 Similar to Inward rectifying shaker K+ channel
Length = 539
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 145/236 (61%), Gaps = 4/236 (1%)
Query: 1 FNIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIRAASNFVGRNHLPPRLKQQILA 60
F+I YM+FNLGLTAYLIGNMTNLVV GT RT +FR+SI+AAS F RN LP +KQQ+L+
Sbjct: 273 FDIVYMMFNLGLTAYLIGNMTNLVVHGTSRTRKFRDSIQAASEFAARNQLPENIKQQVLS 332
Query: 61 YMCLKFRAESLNQQQLMDQLPKSICKGICEYLFLPVVKDVYLFKGVSREVLLLMVTKMKP 120
+ CL+F+ E LNQQ ++D LPK I I LF P+++ YLF GVS + +V +++
Sbjct: 333 HFCLQFKTEGLNQQVMLDCLPKGIRSSIAYSLFFPIIRQAYLFNGVSGNFIAELVMEVQA 392
Query: 121 EYIPPKEDVIVQNEAPDDVYIVVSGEVEVIYSDGEAEERVVATLGTRGVFGEVSALSDRP 180
EY PPKED+I+QNE DVYIVVSG V +I + E+V + +FGEV +L + P
Sbjct: 393 EYFPPKEDIILQNEGEADVYIVVSGAVNII-TTIHGNEQVYEKIAEGEMFGEVGSLCNIP 451
Query: 181 QSFXXXXXXXXXXXXXXXXXXKEAMQSKPEDSVVIIKNF---LKHQIEMHDMKVED 233
Q F +E ++ EDS +++ N LK + + DM D
Sbjct: 452 QPFTCRTAELSQLLRISKTRLREIIEENREDSNILMNNLVQKLKLRESLPDMNQPD 507
>Os01g0210700 Similar to Potassium channel (Fragment)
Length = 568
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 141/233 (60%), Gaps = 3/233 (1%)
Query: 1 FNIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIRAASNFVGRNHLPPRLKQQILA 60
F+I YMLFNLGLTAYLIGNMTNLVV+G+ RT FR++I AAS F RN LP +K ++L+
Sbjct: 222 FSICYMLFNLGLTAYLIGNMTNLVVQGSCRTRNFRDTIHAASQFAARNQLPGHIKDEMLS 281
Query: 61 YMCLKFRAESLNQQQLMDQLPKSICKGICEYLFLPVVKDVYLFKGVSREVLLLMVTKMKP 120
++CL+++ E L Q++ +D LPK I I LFLPV++ VYLF GVS ++ +VT+M+
Sbjct: 282 HICLRYKTEGLKQKETLDSLPKGIRSSIACNLFLPVIEKVYLFHGVSFTCMIQLVTEMEA 341
Query: 121 EYIPPKEDVIVQNEAPDDVYIVVSGEV-EVIYSDGEAEERVVATLGTRGVFGEVSALSDR 179
EY PP+E VI+QNEAP DVYI+VSG V E + DG E+V L +FGE+ +
Sbjct: 342 EYYPPREVVILQNEAPRDVYILVSGAVEERVEIDG--TEKVQEVLCNGEIFGEIGVICSI 399
Query: 180 PQSFXXXXXXXXXXXXXXXXXXKEAMQSKPEDSVVIIKNFLKHQIEMHDMKVE 232
PQ K ++ +D VI+ N + + H E
Sbjct: 400 PQPCAFHTIKVSQLLRLNTAVLKNIIKENSDDRRVILNNLSQKMNQDHRFSTE 452
>Os04g0445000 Similar to Potassium channel SKOR (Stelar K(+) outward rectifying
channel)
Length = 454
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 209/406 (51%), Gaps = 5/406 (1%)
Query: 1 FNIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIRAASNFVGRNHLPPRLKQQILA 60
F + Y+ F++ L+AYLIGNMT L+V+G+R T FR+ + ++ RN L ++ Q+
Sbjct: 18 FTVVYISFSIVLSAYLIGNMTALIVKGSR-TERFRDRMTDLIRYMNRNRLGSAIRSQVKD 76
Query: 61 YMCLKFRAESLNQQQLMDQLPKSICKGICEYLFLPVVKDVYLFKGVSREVLLLMVTKMKP 120
++ L++ + + ++D +P ++ + + L+L +V V LF+G S + L +V K+
Sbjct: 77 HLMLQYESSYTRDRVIVDDIPVAVRSKMSQTLYLDMVSRVGLFRGCSDDFLSQIVLKLHE 136
Query: 121 EYIPPKEDVIVQNEAPDDVYIVVSGEVEVIYSDGEAEERVVATLGTRGVFGEVSALSDRP 180
E+ P E ++ Q D +YIV G +E + + + E +++ L G+ G+V+ + + P
Sbjct: 137 EFFLPGEVILEQGTVVDQIYIVAHGCLEEVANGEDGSEEIISELRPYGIVGDVAVICNIP 196
Query: 181 QSFXXXXXXXXXXXXXXXXXXKEAMQSKPEDSVVIIKNFLK-HQIEMHDMKVEDLLGEDA 239
Q + +Q +D+ I+ N LK + E ++E +
Sbjct: 197 QPYTVRVCELCSLLRIDKQSLTSILQIYFKDNSQILSNLLKGKETESKRKQLESDITYLL 256
Query: 240 AGEYDHGNIPCNLLTVAATGNSSFLEDLLKVGMDPDVGDSKGRTALHIAASKGYEDCVLV 299
A + + N A G+ L+ L+ G DP D GRTALHIAA +GYE+ V
Sbjct: 257 AKQESELVLGVN--NAAYHGDIFRLKSLISAGADPSKSDYDGRTALHIAALRGYENIVRF 314
Query: 300 LLKQACNVNIKDAQGNTALWNAIAARHHKIFNILYHFARVSSPHHAAGDLLCLAARRGDL 359
L+++ NVN D GN+ L A+ + H +I ++L + + A G LC R G +
Sbjct: 315 LIQRGANVNSIDRFGNSPLLQAVKSGHDRITSLLVEHGAILNLEDAGG-YLCRVVRGGRI 373
Query: 360 DTLRELLKHGLAVDSEDRDGATALRVALAEGHADVARLLVLNGASV 405
D L++LL+ G++ + + D T L +A AEG VA L+ +GA +
Sbjct: 374 DLLKKLLRFGISPNCRNYDQRTPLHIAAAEGLHLVASTLIESGADI 419
>Os01g0756700 Similar to Potassium channel (Fragment)
Length = 502
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 129/184 (70%), Gaps = 3/184 (1%)
Query: 1 FNIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIRAASNFVGRNHLPPRLKQQILA 60
F I YMLFNL LTAYLIGNMTNLVV T RT +FR+ ++AAS F RN LP ++++Q+L
Sbjct: 280 FGICYMLFNLWLTAYLIGNMTNLVVHSTSRTRDFRDVVQAASEFAARNQLPQQIEEQMLN 339
Query: 61 YMCLKFRAESLNQQQLMDQLPKSICKGICEYLFLPVVKDVYLFKGVSREVLLLMVTKMKP 120
++CL+++ + L QQ+ +D LPK++ I YLF VV+ YLFKGVS + +VT+M+
Sbjct: 340 HICLRYKTDGLKQQETLDVLPKAMRSSISHYLFFRVVQGAYLFKGVSSRFIQQLVTEMQA 399
Query: 121 EYIPPKEDVIVQNEAPDDVYIVVSGEVEV-IYSDGEAEERVVATLGTRGVFGEVSALSDR 179
EY PKED+I+QN++P D+Y++VSG V++ ++ DG E+V + GE+ L ++
Sbjct: 400 EYFAPKEDIILQNDSPSDLYLLVSGAVDILVFLDG--TEQVYRRAAEGELLGEIGVLCNK 457
Query: 180 PQSF 183
PQSF
Sbjct: 458 PQSF 461
>Os01g0718700
Length = 593
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 136/222 (61%)
Query: 1 FNIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIRAASNFVGRNHLPPRLKQQILA 60
F+I +MLFN+GLT+Y+IGN+TNLVV T T + R+ ++ S F N LP +++Q++
Sbjct: 249 FSIAFMLFNMGLTSYIIGNITNLVVHETTNTFKMRDMVQRTSVFGRTNRLPVAMREQMME 308
Query: 61 YMCLKFRAESLNQQQLMDQLPKSICKGICEYLFLPVVKDVYLFKGVSREVLLLMVTKMKP 120
+ L+FRAE QQ+++ +LPK++ GI +++F V+ YLF+GVS +++L +V +MK
Sbjct: 309 SLQLRFRAEEQLQQEMLSELPKAVRSGIAQHMFRGAVQSCYLFQGVSDKLVLPLVAEMKA 368
Query: 121 EYIPPKEDVIVQNEAPDDVYIVVSGEVEVIYSDGEAEERVVATLGTRGVFGEVSALSDRP 180
E PPK D+I++NEA D YI+VSGEVEV+ + + E+ V +G RG+ GE+ + + P
Sbjct: 369 ESFPPKADIILENEASTDCYIIVSGEVEVLTTLEDGTEKQVMRIGPRGMAGEIGVMFNIP 428
Query: 181 QSFXXXXXXXXXXXXXXXXXXKEAMQSKPEDSVVIIKNFLKH 222
Q F ++ D VV+ NF+ +
Sbjct: 429 QPFTIRSRKLTQLVRISHSHMVSTIRPNTADGVVVFSNFVLY 470
>Os06g0254200
Length = 591
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 153/273 (56%), Gaps = 16/273 (5%)
Query: 1 FNIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIRAASNFVGRNHLPPRLKQQILA 60
F+I +MLFN+GLT+Y+IGN+TNLVV T T + R+ ++ S F N LP +++Q+LA
Sbjct: 248 FSIAFMLFNMGLTSYIIGNITNLVVRETSNTFKMRDMVQRVSEFGRMNRLPEAMREQMLA 307
Query: 61 YMCLKFRAESLNQQQLMDQLPKSICKGICEYLFLPVVKDVYLFKGVSREVLLLMVTKMKP 120
+ L+FR + QQ+++ +LPK++ G+ +++F ++ YLF+GVS +++ +V +MK
Sbjct: 308 SVQLRFRTDEQLQQEMLSELPKAVRSGVMKHMFKSAIESCYLFQGVSDSLIVQLVAEMKA 367
Query: 121 EYIPPKEDVIVQNEAPDDVYIVVSGEVEVIYSDGEAEERVVATLGTRGVFGEVSALSDRP 180
E+ PPK +VI++NE D YI++SGEVE + + + E+ V +G RG+ GE+ + P
Sbjct: 368 EFFPPKANVILENETSTDCYIIISGEVEALTTLADGTEKHVKRIGPRGMAGEIGVMFSIP 427
Query: 181 QSFXXXXXXXXXXXXXXXXXXKEAMQSKPEDSVVIIKNFLKHQIEMHDMKVEDLLGEDAA 240
Q F +A++ D ++ NF+++ + +KV+ +D A
Sbjct: 428 QPFTIRSRRLTQVVRISHIHLLQAVRPNTADGYIVFSNFIQY---LESLKVQT---KDVA 481
Query: 241 GEYDHGNIPCNLLTVAATGNSSFLEDLLKVGMD 273
DH GNS L +V +D
Sbjct: 482 FVSDH----------LWNGNSMVLRRATEVAVD 504
>Os04g0117500
Length = 368
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%)
Query: 1 FNIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIRAASNFVGRNHLPPRLKQQILA 60
F+I +MLFN+GLT+Y+IGN+TNLVV T T + R+ ++ S F N LP +++Q+LA
Sbjct: 207 FSIAFMLFNMGLTSYIIGNITNLVVRETSNTFKMRDMVQWVSEFGSMNRLPEVMREQMLA 266
Query: 61 YMCLKFRAESLNQQQ 75
L+FR + Q +
Sbjct: 267 NGQLRFRTKEQLQHE 281
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,065,137
Number of extensions: 676806
Number of successful extensions: 2446
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 2456
Number of HSP's successfully gapped: 11
Length of query: 566
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 460
Effective length of database: 11,501,117
Effective search space: 5290513820
Effective search space used: 5290513820
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)