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Os01g0648000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to AKT1-like potassium channel.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0253) R2 : 0.138
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.552 (0.0651) R2dC : 0.136 R2C : 0.136
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0543 (0.0533) R2dN8 : 0.00253 R2N8 : 0.00268
σ : 0.478
deviance : 104.41
__
_____
C
peak time of C : 16.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
78.72 0.417 10.4 -0.179 0.867 0.825 0.0992 1.38 -0.0772 21.8 0.09 44 -- --
81.72 0.421 10.4 -0.223 0.876 0.831 -1.39 -- -0.0578 21.9 0.06 41 -- --
78.73 0.413 10.4 -0.184 0.865 0.825 -- 1.31 -0.078 21.8 0.08991 43 -- --
88.94 0.439 10.4 -0.218 0.902 0.832 -- -- -0.083 21.6 0.06999 36 -- --
103.42 0.476 10.4 -0.106 -- 0.229 -- 1.28 -0.082 -- 0.08991 43 -- --
100.02 0.469 10.4 -0.144 0.505 -- 1.3 -- -0.0762 15.2 -- -- -- --
104.05 0.478 10.4 -0.117 0.55 -- -- -- -0.0674 16.3 -- -- -- --
105.95 0.479 10.4 -0.122 -- 0.587 -- -- -0.0839 -- 4.61 592 -- --
90.13 0.442 10.4 -- 0.877 0.81 -- -- -0.0595 21.6 0.08912 37 -- --
120.33 0.513 10.4 -0.139 -- -- -- -- -0.0819 -- -- -- -- --
104.41 0.478 10.4 -- 0.552 -- -- -- -0.0543 16.3 -- -- -- --
106.14 0.48 10.4 -- -- 0.603 -- -- -0.101 -- 4.38 589 -- --
120.84 0.513 10.4 -- -- -- -- -- -0.0665 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 70.06 wind 7.0 90 < th dose independent rect. 18 11
3 70.50 radiation 1.0 30 < th dose independent rect. 18 11
4 70.51 precipitation 0.1 30 < th dose independent rect. 18 11
5 70.51 precipitation 0.1 30 < th dose dependent rect. 18 11
6 70.53 radiation 1.0 30 < th dose dependent rect. 18 11
7 70.65 humidity 60.0 30 > th dose independent rect. 18 11
16 71.38 atmosphere 995.0 90 > th dose independent rect. 18 11
22 71.46 temperature 10.0 90 > th dose independent rect. 18 11
27 71.46 temperature 10.0 90 > th dose independent rect. 5 13
28 71.46 atmosphere 1015.0 90 < th dose independent rect. 5 13
32 71.58 precipitation 0.1 30 < th dose independent rect. 5 13
33 71.58 precipitation 0.1 30 < th dose dependent rect. 5 13
45 71.79 wind 9.0 90 < th dose independent rect. 5 13
51 72.18 radiation 1.0 30 < th dose dependent rect. 18 14
57 72.31 temperature 30.0 30 < th dose independent rect. 18 11
65 72.66 radiation 10.0 30 < th dose dependent sin 12 NA
79 73.21 temperature 10.0 270 > th dose independent rect. 3 14
80 73.21 atmosphere 1015.0 270 < th dose independent rect. 3 14
84 73.29 wind 9.0 270 < th dose independent rect. 3 14
99 73.76 wind 1.0 90 > th dose independent rect. 18 11
118 74.10 precipitation 0.1 270 < th dose independent rect. 3 14
119 74.10 precipitation 0.1 270 < th dose dependent rect. 3 14
132 74.69 atmosphere 995.0 30 > th dose independent rect. 5 13
141 75.03 atmosphere 995.0 30 > th dose dependent rect. 18 11
147 75.13 wind 7.0 720 < th dose independent rect. 17 2
169 75.67 radiation 1.0 30 < th dose independent sin 12 NA
193 76.01 wind 9.0 30 < th dose dependent rect. 18 11
196 76.02 radiation 40.0 1440 < th dose dependent rect. 19 10
218 76.57 humidity 90.0 90 < th dose dependent rect. 18 20
220 76.64 humidity 50.0 30 > th dose independent rect. 5 13
223 76.74 radiation 40.0 90 < th dose independent rect. 5 13
233 77.00 humidity 50.0 270 > th dose independent rect. 13 18
244 77.20 atmosphere 995.0 270 > th dose independent rect. 3 14
246 77.27 radiation 1.0 270 > th dose independent rect. 7 5
247 77.28 temperature 25.0 270 < th dose independent rect. 12 19
263 77.47 temperature 15.0 270 > th dose independent rect. 7 5
267 77.61 radiation 10.0 1440 < th dose independent rect. 19 10
268 77.67 temperature 15.0 270 > th dose independent rect. 12 11
271 77.72 precipitation 0.1 270 < th dose independent rect. 7 5
274 77.72 precipitation 0.1 270 < th dose dependent rect. 7 5
276 77.73 wind 9.0 270 < th dose independent rect. 7 5
282 77.79 atmosphere 995.0 270 > th dose independent rect. 7 5
283 77.79 atmosphere 1015.0 270 < th dose independent rect. 7 5
285 77.79 temperature 10.0 270 > th dose independent rect. 12 19
288 77.82 humidity 50.0 270 > th dose independent rect. 3 14
291 77.86 precipitation 0.1 270 < th dose independent rect. 23 13
293 77.86 precipitation 0.1 270 < th dose dependent rect. 23 13
297 78.03 wind 9.0 270 < th dose independent rect. 12 19
301 78.07 temperature 10.0 270 > th dose independent rect. 23 13
302 78.07 atmosphere 995.0 270 > th dose independent rect. 23 13
305 78.11 wind 9.0 270 < th dose independent rect. 23 13
307 78.14 atmosphere 1015.0 30 < th dose independent rect. 18 11
315 78.27 wind 1.0 30 > th dose independent rect. 5 13
318 78.31 precipitation 0.1 270 < th dose independent rect. 12 19
319 78.31 precipitation 0.1 270 < th dose dependent rect. 12 19
332 78.50 humidity 50.0 270 > th dose independent rect. 7 5
335 78.51 wind 9.0 270 < th dose independent rect. 12 11
338 78.55 wind 1.0 720 > th dose independent rect. 17 2
340 78.56 atmosphere 1015.0 270 < th dose independent rect. 12 19
346 78.70 radiation 20.0 720 < th dose independent rect. 5 2
351 78.73 wind 1.0 270 > th dose independent rect. 7 5
361 78.91 wind 9.0 720 < th dose independent rect. 7 22
373 78.99 humidity 70.0 720 > th dose independent rect. 5 2
383 79.07 temperature 10.0 1440 > th dose independent rect. 19 11
386 79.07 temperature 30.0 1440 < th dose independent rect. 19 11
390 79.07 humidity 50.0 1440 > th dose independent rect. 19 11
392 79.07 atmosphere 995.0 1440 > th dose independent rect. 19 11
402 79.07 temperature 10.0 1440 > th dose independent rect. 6 13
410 79.18 temperature 10.0 30 > th dose dependent rect. 18 11
412 79.21 wind 7.0 720 < th dose independent rect. 5 2
414 79.21 temperature 10.0 720 > th dose independent rect. 5 2
415 79.21 temperature 30.0 720 < th dose independent rect. 5 2
416 79.21 humidity 50.0 720 > th dose independent rect. 5 2
418 79.21 atmosphere 995.0 720 > th dose independent rect. 5 2
419 79.21 atmosphere 1015.0 720 < th dose independent rect. 5 2
421 79.21 temperature 10.0 720 > th dose independent rect. 7 22
422 79.22 precipitation 0.1 720 < th dose independent rect. 5 2
425 79.22 precipitation 0.1 720 < th dose dependent rect. 5 2
457 79.33 atmosphere 995.0 270 > th dose independent rect. 12 19
459 79.38 humidity 50.0 270 > th dose dependent rect. 12 19
485 79.62 temperature 10.0 720 > th dose dependent rect. 5 2
486 79.65 humidity 90.0 90 < th dose dependent rect. 7 7
490 79.68 humidity 90.0 90 < th dose dependent rect. 24 14
493 79.72 temperature 10.0 720 > th dose independent rect. 17 2
494 79.72 atmosphere 1015.0 720 < th dose independent rect. 17 2
495 79.72 radiation 30.0 720 < th dose independent rect. 17 2
498 79.72 temperature 10.0 720 > th dose independent rect. 19 22
505 79.79 humidity 90.0 270 < th dose independent rect. 7 5
519 79.88 atmosphere 1015.0 270 < th dose independent rect. 23 13
564 80.01 radiation 10.0 10 < th dose independent rect. 5 13
587 80.06 precipitation 0.1 720 < th dose independent rect. 17 2
588 80.06 precipitation 0.1 720 < th dose dependent rect. 17 2
603 80.15 humidity 90.0 90 < th dose dependent rect. 2 12
619 80.24 precipitation 0.1 270 < th dose independent rect. 12 11
620 80.24 precipitation 0.1 270 < th dose dependent rect. 12 11
623 80.29 radiation 40.0 90 < th dose independent rect. 14 19
632 80.36 radiation 20.0 10 < th dose dependent rect. 5 13
640 80.39 atmosphere 1015.0 270 < th dose independent rect. 12 11
694 80.51 humidity 50.0 30 > th dose dependent rect. 5 13
706 80.57 radiation 1.0 10 > th dose independent rect. 9 5
724 80.65 radiation 1.0 270 > th dose independent rect. 17 20
757 80.78 radiation 40.0 10 < th dose dependent rect. 14 4
783 80.88 radiation 40.0 720 < th dose dependent rect. 17 2
785 80.89 precipitation 0.1 30 < th dose independent rect. 18 21
787 80.89 precipitation 0.1 30 < th dose dependent rect. 18 21
790 80.91 humidity 50.0 720 > th dose independent rect. 17 2
827 81.03 radiation 1.0 90 > th dose independent rect. 14 17
833 81.07 temperature 10.0 30 > th dose dependent rect. 5 13
835 81.08 humidity 90.0 270 < th dose independent rect. 23 13
847 81.11 radiation 20.0 10 < th dose dependent rect. 12 6
848 81.11 radiation 40.0 30 < th dose dependent rect. 5 13
858 81.14 radiation 40.0 720 < th dose independent rect. 19 14
859 81.14 radiation 20.0 30 < th dose independent rect. 5 19
866 81.17 radiation 40.0 30 < th dose independent rect. 15 3
872 81.18 radiation 40.0 10 < th dose independent rect. 14 19
875 81.19 humidity 50.0 30 > th dose dependent rect. 18 11
883 81.20 wind 9.0 30 < th dose independent rect. 18 21
885 81.21 wind 9.0 30 < th dose independent rect. 15 3
991 81.41 temperature 30.0 270 < th dose independent rect. 7 5
993 81.41 humidity 80.0 90 < th dose independent rect. 18 20
996 81.42 wind 9.0 720 < th dose independent rect. 9 10
998 81.42 atmosphere 995.0 90 > th dose independent rect. 18 21
999 81.42 radiation 1.0 30 < th dose dependent no NA NA