Os02g0245800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Inward rectifying shaker K+ channel.
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Os02g0245800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Inward rectifying shaker K+ channel.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 213.52 | 0.687 | 6.89 | -0.591 | 2.95 | -1.97 | 0.168 | -0.819 | 0.715 | 4.8 | 19.59 | 258 | 15.1 | 11.3 |
| 216.01 | 0.685 | 6.88 | -0.517 | 2.91 | -1.96 | 0.147 | -- | 0.737 | 4.83 | 19.49 | 265 | 14.9 | 11.3 |
| 212.75 | 0.679 | 6.9 | -0.574 | 2.88 | -2.1 | -- | -0.895 | 0.737 | 4.62 | 19.46 | 277 | 14.8 | 11.3 |
| 216.04 | 0.685 | 6.88 | -0.521 | 2.89 | -1.97 | -- | -- | 0.738 | 4.82 | 19.47 | 264 | 14.9 | 11.4 |
| 405.99 | 0.938 | 6.84 | 0.0749 | -- | -2.39 | -- | 0.617 | 1.02 | -- | 19.67 | 157 | 13.7 | 11.5 |
| 270.78 | 0.771 | 6.85 | -0.935 | 3.71 | -- | 1.53 | -- | 0.628 | 7.05 | -- | -- | -- | -- |
| 276.79 | 0.779 | 6.85 | -0.908 | 3.72 | -- | -- | -- | 0.623 | 7 | -- | -- | -- | -- |
| 317.06 | 0.829 | 7 | 0.369 | -- | -2.91 | -- | -- | 0.639 | -- | 19.6 | 374 | 9.58 | 13.7 |
| 222.5 | 0.695 | 6.87 | -- | 2.84 | -2.2 | -- | -- | 0.81 | 4.5 | 19.4 | 274 | 14.7 | 11.4 |
| 1003.54 | 1.48 | 6.93 | -0.832 | -- | -- | -- | -- | 0.692 | -- | -- | -- | -- | -- |
| 298.5 | 0.808 | 6.83 | -- | 3.71 | -- | -- | -- | 0.724 | 7.01 | -- | -- | -- | -- |
| 277.38 | 0.776 | 6.92 | -- | -- | -3.56 | -- | -- | 0.752 | -- | 19.56 | 458 | 9.22 | 12.5 |
| 1021.81 | 1.49 | 6.91 | -- | -- | -- | -- | -- | 0.784 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 217.16 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 11 |
| 2 | 219.55 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 3 | 219.68 | temperature | 20 | 10 | < th | dose independent | sin | 11 | NA |
| 4 | 220.02 | temperature | 20 | 90 | < th | dose independent | sin | 11 | NA |
| 6 | 220.03 | temperature | 20 | 10 | < th | dose independent | rect. | 18 | 15 |
| 17 | 220.80 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 12 |
| 18 | 220.83 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 22 |
| 21 | 221.10 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 10 |
| 23 | 221.18 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 23 |
| 35 | 222.15 | temperature | 20 | 10 | < th | dose independent | rect. | 15 | 18 |
| 40 | 222.19 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 41 | 222.20 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 10 |
| 48 | 222.36 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 8 |
| 59 | 222.58 | temperature | 20 | 90 | < th | dose independent | rect. | 15 | 16 |
| 63 | 222.74 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 78 | 223.06 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 6 |
| 79 | 223.06 | temperature | 20 | 90 | < th | dose independent | rect. | 15 | 14 |
| 155 | 224.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 13 |
| 214 | 225.34 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 12 | 19 |
| 231 | 225.62 | temperature | 30 | 90 | < th | dose dependent | sin | 11 | NA |
| 340 | 227.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 358 | 227.60 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 10 |
| 365 | 227.72 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 21 |
| 409 | 228.17 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 20 |
| 413 | 228.23 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 10 |
| 443 | 228.59 | temperature | 25 | 10 | < th | dose dependent | sin | 13 | NA |
| 567 | 229.88 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 2 |
| 600 | 230.22 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 12 |
| 602 | 230.24 | temperature | 10 | 90 | > th | dose dependent | sin | 11 | NA |
| 671 | 230.95 | temperature | 20 | 270 | > th | dose independent | sin | 14 | NA |
| 724 | 231.49 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 16 |
| 765 | 231.85 | temperature | 10 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 784 | 232.05 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 14 |
| 790 | 232.11 | temperature | 20 | 90 | > th | dose independent | rect. | 22 | 13 |
| 813 | 232.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 11 |
| 815 | 232.37 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 10 | 21 |
| 849 | 232.62 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 15 |
| 898 | 233.14 | temperature | 20 | 90 | > th | dose independent | sin | 11 | NA |
| 943 | 233.48 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 1 |