BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0444800 Os04g0444800|AK067009
(758 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0444800 Ferric reductase-like transmembrane component ... 1297 0.0
Os04g0578600 Ferric reductase-like transmembrane component ... 277 2e-74
Os05g0528000 Similar to RbohAOsp (Fragment) 115 8e-26
Os01g0734200 Similar to RbohAOsp (Fragment) 112 1e-24
Os01g0360200 Similar to Respiratory burst oxidase homolog 111 2e-24
AK099714 109 7e-24
Os09g0438000 Similar to RbohAOsp (Fragment) 103 4e-22
Os08g0453700 Similar to RbohAOsp (Fragment) 97 6e-20
Os05g0465800 Similar to RbohAp108 92 2e-18
Os01g0835500 Similar to Respiratory burst oxidase protein 83 7e-16
>Os04g0444800 Ferric reductase-like transmembrane component family protein
Length = 758
Score = 1297 bits (3357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/758 (86%), Positives = 654/758 (86%)
Query: 1 MTPSMMAQERGEPLLQSXXXXXXXXXXXXXXXXXXRTVLKVLMWAVFLTWAAAIFFYPTK 60
MTPSMMAQERGEPLLQS RTVLKVLMWAVFLTWAAAIFFYPTK
Sbjct: 1 MTPSMMAQERGEPLLQSGNGAAGGGAKGWPPPALARTVLKVLMWAVFLTWAAAIFFYPTK 60
Query: 61 PAQAAFEGWMAATKQSLFGITGSIFLAFSAPILIVAALAYVYISAFPSDHIHVEKNKLKT 120
PAQAAFEGWMAATKQSLFGITGSIFLAFSAPILIVAALAYVYISAFPSDHIHVEKNKLKT
Sbjct: 61 PAQAAFEGWMAATKQSLFGITGSIFLAFSAPILIVAALAYVYISAFPSDHIHVEKNKLKT 120
Query: 121 LCFRLWTFPVLVDGPFGVVSAVEFIGIVLFIVYVVYSMTYYAVESVSLISKFGQISLTYS 180
LCFRLWTFPVLVDGPFGVVSAVEFIGIVLFIVYVVYSMTYYAVESVSLISKFGQISLTYS
Sbjct: 121 LCFRLWTFPVLVDGPFGVVSAVEFIGIVLFIVYVVYSMTYYAVESVSLISKFGQISLTYS 180
Query: 181 ELLLYIIGLRFGSIGLFCMAFLFLPVSRGSVLLRLIDIPFEHATRYHVWLGHLTMALFTL 240
ELLLYIIGLRFGSIGLFCMAFLFLPVSRGSVLLRLIDIPFEHATRYHVWLGHLTMALFTL
Sbjct: 181 ELLLYIIGLRFGSIGLFCMAFLFLPVSRGSVLLRLIDIPFEHATRYHVWLGHLTMALFTL 240
Query: 241 HGLCYVIAWSLEGNLLGELAAWKEIGVANLPGVISLAAGLLMWVTSLHPVRKTYFELFFY 300
HGLCYVIAWSLEGNLLGELAAWKEIGVANLPGVISLAAGLLMWVTSLHPVRKTYFELFFY
Sbjct: 241 HGLCYVIAWSLEGNLLGELAAWKEIGVANLPGVISLAAGLLMWVTSLHPVRKTYFELFFY 300
Query: 301 THQLYIIFVVFLAFHVGDFIFSFSAGPIFLFMLDRFLRFWQCRAKVDIISASCRPCGTVE 360
THQLYIIFVVFLAFHVGDFIFSFSAGPIFLFMLDRFLRFWQCRAKVDIISASCRPCGTVE
Sbjct: 301 THQLYIIFVVFLAFHVGDFIFSFSAGPIFLFMLDRFLRFWQCRAKVDIISASCRPCGTVE 360
Query: 361 LVFSKPASLRYNALSFIFVQVRELSFLEWHPFSVSSSPMDGRYHMSILIKVLGSWTEKLR 420
LVFSKPASLRYNALSFIFVQVRELSFLEWHPFSVSSSPMDGRYHMSILIKVLGSWTEKLR
Sbjct: 361 LVFSKPASLRYNALSFIFVQVRELSFLEWHPFSVSSSPMDGRYHMSILIKVLGSWTEKLR 420
Query: 421 GIITDAQEQGRNGSESETGRITACVEGPYGHESPYHLMYENLILVAGGIGISPFLAILSD 480
GIITDAQEQGRNGSESETGRITACVEGPYGHESPYHLMYENLILVAGGIGISPFLAILSD
Sbjct: 421 GIITDAQEQGRNGSESETGRITACVEGPYGHESPYHLMYENLILVAGGIGISPFLAILSD 480
Query: 481 IIHRIEEGKPCMPKNVLVLWSVKKSNELSLLSAVDAQFISSSVSDKLHLDIQAFVTQESQ 540
IIHRIEEGKPCMPKNVLVLWSVKKSNELSLLSAVDAQFISSSVSDKLHLDIQAFVTQESQ
Sbjct: 481 IIHRIEEGKPCMPKNVLVLWSVKKSNELSLLSAVDAQFISSSVSDKLHLDIQAFVTQESQ 540
Query: 541 PPLEEGIVGDDQKATGMFVKNGTTMSGLVGTGNNFWAGMYFAASTLGFXXXXXXXXXXXX 600
PPLEEGIVGDDQKATGMFVKNGTTMSGLVGTGNNFWAGMYFAASTLGF
Sbjct: 541 PPLEEGIVGDDQKATGMFVKNGTTMSGLVGTGNNFWAGMYFAASTLGFVLAYALAQAYYV 600
Query: 601 XXXNVFAWWHLGLVFVLCMXXXXXXXXXXXXXXWHLSEKXXXXXXXXXXXXXXXXXXXXG 660
NVFAWWHLGLVFVLCM WHLSEK G
Sbjct: 601 RRLNVFAWWHLGLVFVLCMAAGVALPGGLVVLLWHLSEKRKAEDDRWDAAAAAVPRAQDG 660
Query: 661 EEEAEQTTNGADAADGGVSLAAVKTTRYGCRPQXXXXXXXXXXXXXXXXXXXXXXXXXPP 720
EEEAEQTTNGADAADGGVSLAAVKTTRYGCRPQ PP
Sbjct: 661 EEEAEQTTNGADAADGGVSLAAVKTTRYGCRPQFEAEFAAFAEKAGGGAADVGVLVCGPP 720
Query: 721 GLQASVARECRSHNLXXXXXXXXXXXXVFHFNSHSFDL 758
GLQASVARECRSHNL VFHFNSHSFDL
Sbjct: 721 GLQASVARECRSHNLGRRGGRRRRAGAVFHFNSHSFDL 758
>Os04g0578600 Ferric reductase-like transmembrane component family protein
Length = 525
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 215/355 (60%), Gaps = 9/355 (2%)
Query: 188 GLRFGSIGLFCMAFLFLPVSRGSVLLRLIDIPFEHATRYHVWLGHLTMALFTLHGLCYVI 247
LR G +G FC AFLF PV+RGS LL LI + E + +YHVWLG+L M FT HGLCY++
Sbjct: 15 ALRLGHVGSFCCAFLFFPVARGSSLLPLIGLTSEASIKYHVWLGNLVMLFFTAHGLCYIV 74
Query: 248 AWSLEGNLLGELAAWKEIGVANLPGVISLAAGLLMWVTSLHPVRKTYFELFFYTHQLYII 307
W+ + + E+ W VAN+PG ++L +GL+MWVT+L VR+ FELFFY H LY +
Sbjct: 75 FWA-STDQIHEMLKWTRTKVANVPGELALLSGLVMWVTALPRVRRQMFELFFYAHHLYAL 133
Query: 308 FVVFLAFHVGDFIFSFSAGPIFLFMLDRFLRFWQCRAKVDIISASCRPCGTVELVFSKPA 367
F+V A HVG F +FLFM+DR+LRF Q R +V ++SA C VEL F K
Sbjct: 134 FLVLFALHVGVAFFCSILPGVFLFMVDRYLRFLQSRVRVRLVSARLLACDAVELNFCKSP 193
Query: 368 SLRYNALSFIFVQVRELSFLEWHPFSVSSSPMDGRYHMSILIKVLGSWTEKLRGIITDAQ 427
L ++ +S +F+ V +S L+WHPF+V+SS +S+++K G WTEKL I+
Sbjct: 194 HLTHSPMSTVFINVPCVSRLQWHPFTVTSSSSLEPDRLSVVVKRAGRWTEKLYETISSL- 252
Query: 428 EQGRNGSESETGRITACVEGPYGHESPYH-LMYENLILVAGGIGISPFLAILSDIIHRIE 486
S+ G + VEGPY +P L Y++L++++GG GI+PF++++ +++HR
Sbjct: 253 ------PPSQPGHLDVSVEGPYSQATPASFLQYDSLVMISGGGGITPFISVIRELVHRSG 306
Query: 487 EGKPCMPKNVLVLWSVKKSNELSLLSAVDAQFISSSVSDKLHLDIQAFVTQESQP 541
++L++ K S +L++L + S +L L I+AFVT+ES P
Sbjct: 307 TAAEAATPSLLLIAVFKTSADLAMLDLIVPASGGFSDISRLELRIEAFVTRESVP 361
>Os05g0528000 Similar to RbohAOsp (Fragment)
Length = 951
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 163/339 (48%), Gaps = 55/339 (16%)
Query: 199 MAFLFLPVSRGSVL-LRLID----IPFEHATRYHVWLGHLTMALFTLHGLCYVI------ 247
MA + LPV R ++ LR +PF+ +H + + LHG +++
Sbjct: 438 MAIILLPVCRNTITWLRNTRAARALPFDDNINFHKTIAAAIVVGVILHGGLHLVCDFPRL 497
Query: 248 ------AWSLEGNLLGELAAWKEI---GVANLPGVISLAAGLLMWVTSLHPVRK------ 292
++ G GE GV + GVI L ++ + + R+
Sbjct: 498 IGSSEEKYAPLGKYFGETKPTYLTLVKGVEGITGVIMLVCMIIAFTLATRWFRRSLVKLP 557
Query: 293 ------TYFELFFYTHQLYIIFVVFLAFHVGDFIF-----------SFSAGPIFLFMLDR 335
T F F+Y+H L+II + L H G++++ + A P+ L++ +R
Sbjct: 558 KPFDKLTGFNAFWYSHHLFIIVYISLVIH-GEWLYLIRIWYKRTTWMYLAVPVCLYVGER 616
Query: 336 FLRFWQCRA-KVDIISASCRPCGTVELVFSKPASLRYNALSFIFVQVRELSFLEWHPFSV 394
LRF++ + V ++ + P + L SKP + RY + ++FVQ +S EWHPFS+
Sbjct: 617 TLRFFRSGSYSVRLLKVAIYPGNVLTLQMSKPPTFRYKSGQYMFVQCPAVSPFEWHPFSI 676
Query: 395 SSSPMDGRYHMSILIKVLGSWTEKLRGIITDAQEQ---GRNG--SESETGRI---TACVE 446
+S+P D ++SI ++ LG WT +L+ + + A E G++G ET + ++
Sbjct: 677 TSAPGDD--YLSIHVRQLGDWTRELKRVFSAACEPPVGGKSGLLRADETTKKALPKLLID 734
Query: 447 GPYGHESPYHLMYENLILVAGGIGISPFLAILSDIIHRI 485
GPYG + + Y+ L+LV GIG +PF++IL D+I+ I
Sbjct: 735 GPYGSPAQDYSKYDVLLLVGLGIGATPFISILKDLINSI 773
>Os01g0734200 Similar to RbohAOsp (Fragment)
Length = 743
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 163/339 (48%), Gaps = 55/339 (16%)
Query: 199 MAFLFLPVSRGSVL-LRLID----IPFEHATRYHVWLGHLTMALFTLHGLCYVIA----- 248
MA + LPV R ++ LR +PF+ +H + + LH +++
Sbjct: 230 MAIILLPVCRNTITWLRSTRAARALPFDDNINFHKTIAAAIVVGIILHAGNHLVCDFPRL 289
Query: 249 -------WSLEGNLLGELAAWKEI---GVANLPGVISLAAGLLMWVTSLHPVRK------ 292
++ G GE+ GV + GVI + ++ + + R+
Sbjct: 290 IKSSDEKYAPLGQYFGEIKPTYFTLVKGVEGITGVIMVVCMIIAFTLATRWFRRSLVKLP 349
Query: 293 ------TYFELFFYTHQLYIIFVVFLAFHVGDFIF-----------SFSAGPIFLFMLDR 335
T F F+Y+H L+II + L H G+ ++ + + P+ L++ +R
Sbjct: 350 RPFDKLTGFNAFWYSHHLFIIVYIALIVH-GECLYLIHVWYRRTTWMYLSVPVCLYVGER 408
Query: 336 FLRFWQCRA-KVDIISASCRPCGTVELVFSKPASLRYNALSFIFVQVRELSFLEWHPFSV 394
LRF++ + V ++ + P + L SKP + RY + ++FVQ +S EWHPFS+
Sbjct: 409 ILRFFRSGSYSVRLLKVAIYPGNVLTLQMSKPPTFRYKSGQYMFVQCPAVSPFEWHPFSI 468
Query: 395 SSSPMDGRYHMSILIKVLGSWTEKLRGIITDAQEQ---GRNG---SESETGRI--TACVE 446
+S+P D ++SI ++ LG WT +L+ + A E G++G ++ T +I ++
Sbjct: 469 TSAPGDD--YLSIHVRQLGDWTRELKRVFAAACEPPAGGKSGLLRADETTKKILPKLLID 526
Query: 447 GPYGHESPYHLMYENLILVAGGIGISPFLAILSDIIHRI 485
GPYG + + Y+ L+LV GIG +PF++IL D+++ I
Sbjct: 527 GPYGSPAQDYSKYDVLLLVGLGIGATPFISILKDLLNNI 565
>Os01g0360200 Similar to Respiratory burst oxidase homolog
Length = 905
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 125/260 (48%), Gaps = 48/260 (18%)
Query: 288 HPVRK-TYFELFFYTHQLYIIFVVFLAFHVGDFIFS----------FSAGPIFLFMLDRF 336
+P++K T F F++TH L++I L H S + A P+ L++ +R
Sbjct: 526 NPLKKMTGFNAFWFTHHLFVIVYTLLFVHGTCLYLSRKWYKKTTWMYLAVPVVLYVSERI 585
Query: 337 LRFWQCRAKVDIISASCRPCGTVELVFSKPASLRYNALSFIFVQVRELSFLEWHPFSVSS 396
LR ++ V I + P + L SKP RY + +IF++ +S EWHPFS++S
Sbjct: 586 LRLFRSHDAVGIQKVAVYPGNVLALYMSKPPGFRYRSGQYIFIKCTAVSPYEWHPFSITS 645
Query: 397 SPMDGRYHMSILIKVLGSWTEKLRGIITDAQEQGRNGSESETGRITA------------- 443
+P D ++S+ I+ G WT +LR + ++A R +E E+G + A
Sbjct: 646 APGDD--YLSVHIRTRGDWTSRLRTVFSEA---CRPPTEGESGLLRADLSKGITDEKARF 700
Query: 444 ---CVEGPYGHESPYHLMYENLILVAGGIGISPFLAILSDIIHRIE-EG----------- 488
V+GPYG + + Y+ L+L+ GIG +P ++I+ D+++ I+ EG
Sbjct: 701 PKLLVDGPYGAPAQDYREYDVLLLIGLGIGATPLISIVKDVLNHIQGEGSVGTTEPESSS 760
Query: 489 ----KPCMPKNVLVLWSVKK 504
KP M K W ++
Sbjct: 761 KAKKKPFMTKRAYFYWVTRE 780
>AK099714
Length = 393
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 48/269 (17%)
Query: 289 PVRK-TYFELFFYTHQLYIIFVVFLAFHVGDFIFS----------FSAGPIFLFMLDRFL 337
P +K T F F++TH L++I L H S + A P+ L++ +R L
Sbjct: 15 PSKKMTGFNAFWFTHHLFVIVYTLLFVHGTCLYLSRKWYKKTTWMYLAVPVVLYVSERIL 74
Query: 338 RFWQCRAKVDIISASCRPCGTVELVFSKPASLRYNALSFIFVQVRELSFLEWHPFSVSSS 397
R ++ V I + P + L SKP RY + +IF++ +S EWHPFS++S+
Sbjct: 75 RLFRSHDAVGIQKVAVYPGNVLALYMSKPPGFRYRSGQYIFIKCTAVSPYEWHPFSITSA 134
Query: 398 PMDGRYHMSILIKVLGSWTEKLRGIITDAQEQGRNGSESETGRITA-------------- 443
P D ++S+ I+ G WT +LR + ++A R +E E+G + A
Sbjct: 135 PGDD--YLSVHIRTRGDWTSRLRTVFSEA---CRPPTEGESGLLRADLSKGITDEKARFP 189
Query: 444 --CVEGPYGHESPYHLMYENLILVAGGIGISPFLAILSDIIHRIE-EG------------ 488
V+GPYG + + Y+ L+L+ GIG +P ++I+ D+++ I+ EG
Sbjct: 190 KLLVDGPYGAPAQDYREYDVLLLIGLGIGATPLISIVKDVLNHIQGEGSVGTTEPESSSK 249
Query: 489 ---KPCMPKNVLVLWSVKKSNELSLLSAV 514
KP M K W ++ V
Sbjct: 250 AKKKPFMTKRAYFYWVTREEGSFEWFRGV 278
>Os09g0438000 Similar to RbohAOsp (Fragment)
Length = 1007
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 118/240 (49%), Gaps = 24/240 (10%)
Query: 295 FELFFYTHQLYIIFVVFLAFHVGDFIF-----------SFSAGPIFLFMLDRFLRFWQCR 343
F F+Y+H L I L H G F+F + + P+ L++ +R LR +
Sbjct: 625 FNAFWYSHHLLGIVYALLIAH-GYFLFLVRRWYLKTTWMYISVPLMLYVGERMLRALRSN 683
Query: 344 A-KVDIISASCRPCGTVELVFSKPASLRYNALSFIFVQVRELSFLEWHPFSVSSSPMDGR 402
A V I+ P + + SKP RY + +IF+Q +S EWHPFS++S+P D
Sbjct: 684 AYAVKILKVCLLPGNVLTITMSKPYGFRYRSGQYIFLQCPTISPFEWHPFSITSAPGDD- 742
Query: 403 YHMSILIKVLGSWTEKLRGIITD---AQEQGRNGSESETGRITA------CVEGPYGHES 453
++S+ I+ G WT++L+ I + + R S SE G V+GPYG +
Sbjct: 743 -YLSVHIRTNGDWTQELKRIFVENYFSPHLNRRASFSELGATEPRSLPRLLVDGPYGAPA 801
Query: 454 PYHLMYENLILVAGGIGISPFLAILSDIIHRIEEGKPCMPKNVLVLWSVKKSNELSLLSA 513
Y+ L+LV GIG +PF++IL D+++ I+ + M + S +N S+ +A
Sbjct: 802 QDFRNYDVLLLVGLGIGATPFISILRDLLNNIKLAEELMDLAMETSRSEDSANSFSVSTA 861
>Os08g0453700 Similar to RbohAOsp (Fragment)
Length = 1033
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 37/282 (13%)
Query: 266 GVANLPGVISLAAGLLMWVTSLHPVRKTY-------------FELFFYTHQLYIIFVVFL 312
GV + G++ + ++ + + P+RK F F+Y+H L I+ + L
Sbjct: 609 GVEGVTGIVMVVLMVVSFTLATRPLRKREAPRLPFPLGHLAGFNAFWYSHHLLIVVYLLL 668
Query: 313 AFHVGDFIF-----------SFSAGPIFLFMLDRFLRFWQCRA-KVDIISASCRPCGTVE 360
H G F+F + A P+ L++ +R LR ++ +A V I+ P +
Sbjct: 669 LVH-GWFMFLVTKWHQRTTWMYIAVPLMLYVGERTLRAFRSKAYAVKILKVCLLPGNVLT 727
Query: 361 LVFSKPASLRYNALSFIFVQVRELSFLEWHPFSVSSSPMDGRYHMSILIKVLGSWTEKLR 420
+ SKP RY + +IF+Q +S EWHPFS++S+P D ++S+ I+ G WT++L+
Sbjct: 728 ITMSKPYGFRYRSGQYIFLQCPTISPFEWHPFSITSAPGDD--YISVHIQTRGDWTQELK 785
Query: 421 GIITD---------AQEQGRNGSESETGRITACVEGPYGHESPYHLMYENLILVAGGIGI 471
I + G G + V+GPYG + Y+ L+LV GIG
Sbjct: 786 RIFVENYFVPSVPRRASFGALGMAEQKSPPRLLVDGPYGAPAQDFRNYDVLLLVGLGIGA 845
Query: 472 SPFLAILSDIIHRIEEGKPCMPKNVLVLWSVKKSNELSLLSA 513
+PF++IL D+++ I+ M + S +N S+ +A
Sbjct: 846 TPFISILRDLLNNIKLADELMDLAMETSRSDDSANSFSVSTA 887
>Os05g0465800 Similar to RbohAp108
Length = 819
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 31/240 (12%)
Query: 295 FELFFYTHQLYIIFVVFLAFHVGDFIF-----------SFSAGPIFLFMLDRFLR-FWQC 342
F F+Y H L +I + L H FIF F A P+ + +R +R +
Sbjct: 445 FNAFWYAHHLLVIAYILLVLH-SYFIFLTKQWYNRTTWMFLAVPVLFYSCERTIRRVRES 503
Query: 343 RAKVDIISASCRPCGTVELVFSKPASLRYNALSFIFVQVRELSFLEWHPFSVSSSPMDGR 402
V +I A+ P + + +KP+S +Y + ++FV+ ++S EWHPFS++S+P D
Sbjct: 504 SYGVTVIKAAIYPGNVLSIHMNKPSSFKYKSGMYMFVKCPDVSPFEWHPFSITSAPGDD- 562
Query: 403 YHMSILIKVLGSWTEKLRGIITDAQEQGRNGSESETGRITAC----------------VE 446
++S+ I+ LG WT +LR + A E + ++ R+ ++
Sbjct: 563 -YLSVHIRTLGDWTTELRNLFGKACEAQVSSKKATLARLETTIIADGLKEETCFPKVFID 621
Query: 447 GPYGHESPYHLMYENLILVAGGIGISPFLAILSDIIHRIEEGKPCMPKNVLVLWSVKKSN 506
GP+G + + Y+ L+L+ GIG +PF++IL D+++ I+ + L KSN
Sbjct: 622 GPFGAPAQNYKKYDILLLIGLGIGATPFISILKDLLNNIKSNGDVQSTHDAELGCTFKSN 681
>Os01g0835500 Similar to Respiratory burst oxidase protein
Length = 843
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 19/180 (10%)
Query: 327 PIFLFMLDRFLR-FWQCRAKVDIISASCRPCGTVELVFSKPASLRYNALSFIFVQVRELS 385
P+ + +R +R + +V I+ A+ P + L KP +Y + ++FV+ ++S
Sbjct: 512 PVLFYACERTIRKVRENNYRVSIVKAAIYPGNVLSLHMKKPPGFKYKSGMYLFVKCPDVS 571
Query: 386 FLEWHPFSVSSSPMDGRYHMSILIKVLGSWTEKLRGIITDAQEQGRNGSESETGRITACV 445
EWHPFS++S+P D ++S+ I+ LG WT +LR + A E ++ R+ V
Sbjct: 572 PFEWHPFSITSAPGDD--YLSVHIRTLGDWTTELRNLFGKACEAQVTSKKATLSRLETTV 629
Query: 446 ----------------EGPYGHESPYHLMYENLILVAGGIGISPFLAILSDIIHRIEEGK 489
+GPYG + + Y+ L+L+ GIG +PF++IL D+++ I+ +
Sbjct: 630 VADAQTEDTRFPKVLIDGPYGAPAQNYKKYDILLLIGLGIGATPFISILKDLLNNIKSNE 689
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.140 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,651,707
Number of extensions: 815421
Number of successful extensions: 2196
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 2174
Number of HSP's successfully gapped: 10
Length of query: 758
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 650
Effective length of database: 11,396,689
Effective search space: 7407847850
Effective search space used: 7407847850
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 160 (66.2 bits)