Os01g0360200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Respiratory burst oxidase homolog.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0360200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Respiratory burst oxidase homolog.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.8 | 0.479 | 11.2 | -0.894 | 1.21 | 2.22 | -1.8 | -1.1 | -0.184 | 17 | 21.39 | 1746 | -- | -- |
| 104.63 | 0.476 | 11.1 | -0.584 | 1.23 | 2.16 | -1.83 | -- | -0.1 | 17.1 | 21.08 | 1744 | -- | -- |
| 111.7 | 0.492 | 11.2 | -0.953 | 1.2 | 2.22 | -- | -1.3 | -0.198 | 16.8 | 21.5 | 1743 | -- | -- |
| 112.96 | 0.495 | 11.1 | -0.575 | 1.21 | 2.15 | -- | -- | -0.115 | 16.9 | 21.25 | 1726 | -- | -- |
| 124.01 | 0.519 | 11.1 | -0.654 | -- | 3.01 | -- | -1.09 | -0.132 | -- | 20.67 | 374 | -- | -- |
| 246.43 | 0.736 | 11 | 0.184 | 1.33 | -- | -1.95 | -- | 0.392 | 17.3 | -- | -- | -- | -- |
| 255.77 | 0.749 | 11 | 0.187 | 1.32 | -- | -- | -- | 0.384 | 17.1 | -- | -- | -- | -- |
| 128.5 | 0.528 | 11.1 | -0.498 | -- | 2.92 | -- | -- | -0.137 | -- | 20.32 | 365 | -- | -- |
| 120.7 | 0.512 | 11.1 | -- | 1.23 | 1.97 | -- | -- | -0.00422 | 16.9 | 21.62 | 1720 | -- | -- |
| 347.05 | 0.87 | 11 | 0.141 | -- | -- | -- | -- | 0.35 | -- | -- | -- | -- | -- |
| 256.69 | 0.749 | 11 | -- | 1.32 | -- | -- | -- | 0.363 | 17.1 | -- | -- | -- | -- |
| 134.55 | 0.54 | 11.1 | -- | -- | 2.79 | -- | -- | -0.0614 | -- | 20.64 | 363 | -- | -- |
| 347.58 | 0.87 | 11 | -- | -- | -- | -- | -- | 0.335 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 6 | 96.19 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 38 | 106.76 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 40 | 106.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 45 | 107.13 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 64 | 107.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 67 | 107.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 114 | 107.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 120 | 107.97 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 198 | 108.42 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 212 | 108.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 18 |
| 300 | 109.17 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 558 | 110.25 | temperature | 10 | 1440 | > th | dose dependent | sin | 2 | NA |
| 960 | 112.82 | temperature | 30 | 270 | < th | dose dependent | sin | 21 | NA |