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Os04g0444800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ferric reductase-like transmembrane component family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0385) R2 : 0.925
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.97 (0.195) R2dC : 0.148 R2C : 0.546
β3 : -4.43 (0.182) R2dE : 0.374 R2E : 0.776
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.269 (0.0813) R2dN8 : 0.00229 R2N8 : 0.00248
σ : 0.721
deviance : 239.6
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_____
C
peak time of C : 7.1
E
wheather : temperature
threshold : 19.8
memory length : 293
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 12.6
open length of G : 7.2

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
221.36 0.699 13 0.208 3.27 -4.17 2.35 -0.361 -0.238 7.22 19.78 280 12.8 6.99
220.99 0.692 13 0.206 3.26 -4.18 2.66 -- -0.229 7.23 19.8 281 12.8 7
233.58 0.712 13 0.343 3.26 -4.26 -- -0.793 -0.286 7.08 19.39 284 12.8 7.02
237.31 0.717 13 0.268 2.95 -4.5 -- -- -0.24 7.11 19.76 295 12.6 7.16
292.67 0.797 13.1 0.611 -- -6.48 -- -0.169 -0.259 -- 18.59 275 12.5 8.26
503.38 1.05 12.9 -0.161 7.08 -- 3.56 -- -0.497 6.92 -- -- -- --
535.84 1.08 12.9 -0.0987 7.09 -- -- -- -0.507 6.89 -- -- -- --
289.47 0.792 13.1 0.409 -- -6.53 -- -- -0.107 -- 18.52 280 12.4 8.22
239.6 0.721 13 -- 2.97 -4.43 -- -- -0.269 7.1 19.8 293 12.6 7.2
3174.57 2.63 13.1 0.0527 -- -- -- -- -0.373 -- -- -- -- --
536.1 1.08 12.9 -- 7.09 -- -- -- -0.496 6.89 -- -- -- --
292.54 0.797 13.1 -- -- -6.53 -- -- -0.104 -- 18.5 283 12.4 8.22
3174.65 2.63 13.1 -- -- -- -- -- -0.378 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 225.85 temperature 20.0 270 > th dose independent rect. 13 7
4 235.08 wind 9.0 270 < th dose independent rect. 14 17
5 235.36 temperature 10.0 270 > th dose independent rect. 7 7
6 235.36 atmosphere 995.0 270 > th dose independent rect. 7 7
7 235.36 atmosphere 1015.0 270 < th dose independent rect. 7 7
8 235.36 temperature 10.0 270 > th dose independent rect. 14 17
9 235.95 precipitation 0.1 270 < th dose independent rect. 19 18
10 235.95 precipitation 0.1 270 < th dose dependent rect. 19 18
11 236.40 precipitation 0.1 270 < th dose independent rect. 7 7
12 236.40 precipitation 0.1 270 < th dose dependent rect. 7 7
13 237.30 wind 9.0 270 < th dose independent rect. 7 7
14 238.75 wind 9.0 270 < th dose independent rect. 13 6
15 239.56 radiation 1.0 270 > th dose independent rect. 7 7
16 239.80 temperature 10.0 270 > th dose independent rect. 13 6
18 239.80 atmosphere 1010.0 270 < th dose independent rect. 13 6
20 239.80 temperature 10.0 270 > th dose independent rect. 19 18
21 239.80 atmosphere 995.0 270 > th dose independent rect. 19 18
22 241.38 temperature 10.0 270 > th dose dependent rect. 13 7
23 241.40 wind 9.0 270 < th dose independent rect. 19 18
33 243.46 radiation 40.0 270 < th dose independent rect. 14 17
35 243.93 wind 1.0 270 > th dose independent rect. 13 6
38 245.80 precipitation 0.1 270 < th dose independent rect. 13 6
39 245.80 precipitation 0.1 270 < th dose dependent rect. 13 6
41 246.98 wind 1.0 270 > th dose independent rect. 7 7
44 249.24 humidity 50.0 270 > th dose independent rect. 19 18
46 250.33 wind 1.0 270 > th dose independent rect. 19 18
47 250.76 temperature 10.0 270 > th dose independent rect. 8 5
48 250.76 atmosphere 995.0 270 > th dose independent rect. 8 5
49 250.76 atmosphere 1015.0 270 < th dose independent rect. 8 5
50 250.76 temperature 10.0 270 > th dose independent rect. 13 19
51 250.84 wind 9.0 270 < th dose independent rect. 13 19
52 250.85 precipitation 0.1 270 < th dose independent rect. 8 5
53 250.85 precipitation 0.1 270 < th dose dependent rect. 8 5
58 251.73 atmosphere 995.0 270 > th dose independent rect. 13 6
60 252.17 wind 9.0 270 < th dose independent rect. 8 5
62 252.37 radiation 1.0 270 < th dose dependent rect. 18 9
68 252.65 radiation 1.0 270 > th dose independent rect. 8 5
73 253.08 precipitation 0.1 270 < th dose independent rect. 18 9
74 253.08 precipitation 0.1 270 < th dose dependent rect. 18 9
77 253.39 atmosphere 995.0 270 > th dose independent rect. 14 17
80 253.52 wind 1.0 270 > th dose independent rect. 8 5
88 254.52 wind 9.0 270 < th dose independent rect. 3 15
90 254.95 temperature 10.0 270 > th dose independent rect. 18 9
91 254.95 humidity 50.0 270 > th dose independent rect. 18 9
92 254.95 radiation 20.0 270 < th dose independent rect. 18 9
95 254.95 temperature 10.0 270 > th dose independent rect. 3 15
96 254.95 atmosphere 1015.0 270 < th dose independent rect. 3 15
104 255.10 radiation 40.0 270 < th dose dependent rect. 18 9
105 255.13 humidity 90.0 270 < th dose independent rect. 13 6
110 255.20 wind 9.0 270 < th dose independent rect. 18 9
112 255.44 precipitation 0.1 270 < th dose independent rect. 14 17
113 255.44 precipitation 0.1 270 < th dose dependent rect. 14 17
117 255.53 precipitation 0.1 270 < th dose independent rect. 8 17
118 255.53 precipitation 0.1 270 < th dose dependent rect. 8 17
127 256.48 atmosphere 995.0 270 > th dose independent rect. 18 9
128 256.49 temperature 10.0 270 > th dose independent rect. 1 7
130 256.49 temperature 30.0 270 < th dose independent rect. 1 7
131 256.49 humidity 50.0 270 > th dose independent rect. 1 7
133 256.49 atmosphere 995.0 270 > th dose independent rect. 1 7
134 256.49 atmosphere 1015.0 270 < th dose independent rect. 1 7
135 256.49 temperature 10.0 270 > th dose independent rect. 8 17
137 256.57 wind 9.0 270 < th dose independent rect. 1 7
144 256.94 radiation 40.0 270 < th dose independent rect. 1 7
151 258.20 humidity 50.0 270 > th dose independent rect. 7 7
152 258.25 wind 1.0 270 > th dose independent rect. 19 7
153 258.65 wind 9.0 270 < th dose independent rect. 19 7
156 258.72 temperature 10.0 270 > th dose independent rect. 19 7
157 258.72 temperature 30.0 270 < th dose independent rect. 19 7
158 258.72 humidity 50.0 270 > th dose independent rect. 19 7
159 258.72 atmosphere 995.0 270 > th dose independent rect. 19 7
160 258.72 radiation 1.0 270 < th dose independent rect. 19 7
165 258.72 temperature 10.0 270 > th dose independent rect. 2 17
166 258.72 atmosphere 1015.0 270 < th dose independent rect. 2 17
198 259.52 radiation 1.0 270 < th dose dependent sin 14 NA
208 260.19 wind 9.0 270 < th dose independent rect. 8 17
231 260.68 atmosphere 1015.0 270 < th dose independent rect. 14 17
246 261.06 precipitation 0.1 270 < th dose independent rect. 1 7
247 261.06 precipitation 0.1 270 < th dose dependent rect. 1 7
256 261.90 humidity 50.0 270 > th dose independent rect. 8 5
319 264.47 wind 1.0 270 > th dose independent rect. 8 17
322 264.84 humidity 50.0 270 > th dose dependent rect. 1 7
333 265.71 precipitation 0.1 270 < th dose independent rect. 3 15
335 265.71 precipitation 0.1 270 < th dose dependent rect. 3 15
344 266.09 atmosphere 995.0 270 > th dose independent rect. 13 19
346 266.45 radiation 1.0 270 > th dose independent rect. 14 16
370 267.95 radiation 1.0 270 < th dose independent sin 14 NA
376 268.15 atmosphere 1015.0 270 < th dose independent rect. 13 19
377 268.21 humidity 50.0 270 > th dose independent rect. 13 6
388 268.75 precipitation 0.1 270 < th dose independent rect. 13 19
389 268.75 precipitation 0.1 270 < th dose dependent rect. 13 19
428 270.81 radiation 40.0 90 < th dose independent rect. 14 7
433 271.30 humidity 90.0 270 < th dose independent rect. 14 4
434 271.41 temperature 10.0 270 > th dose dependent rect. 14 17
437 271.73 radiation 1.0 270 > th dose independent sin 14 NA
463 272.79 temperature 10.0 270 > th dose dependent rect. 13 19
478 273.26 atmosphere 995.0 270 > th dose independent rect. 2 17
479 273.27 radiation 40.0 270 < th dose dependent rect. 1 7
548 275.66 wind 9.0 270 < th dose dependent rect. 1 7
561 276.51 radiation 1.0 270 < th dose dependent rect. 9 17
567 277.00 humidity 90.0 270 < th dose independent rect. 15 2
573 277.47 temperature 20.0 270 > th dose independent rect. 15 2
588 278.36 humidity 50.0 270 > th dose independent rect. 14 17
592 278.73 precipitation 0.1 270 < th dose independent rect. 17 22
593 278.73 precipitation 0.1 270 < th dose dependent rect. 17 22
616 280.06 radiation 1.0 270 > th dose independent rect. 14 4
716 283.57 radiation 1.0 270 < th dose independent rect. 9 17
719 283.73 atmosphere 995.0 270 > th dose independent rect. 8 17
803 287.54 radiation 40.0 270 < th dose independent rect. 15 2
806 287.64 wind 9.0 270 < th dose independent rect. 15 2
809 287.84 temperature 10.0 270 > th dose independent rect. 15 2
811 287.84 atmosphere 1010.0 270 < th dose independent rect. 15 2
813 287.84 temperature 10.0 270 > th dose independent rect. 17 22
831 288.12 wind 1.0 270 > th dose dependent rect. 13 6
833 288.19 wind 1.0 270 > th dose independent rect. 15 2
856 288.83 radiation 1.0 270 > th dose independent rect. 15 2
927 291.01 precipitation 0.1 270 < th dose independent rect. 15 2
928 291.01 precipitation 0.1 270 < th dose dependent rect. 15 2
947 291.54 temperature 10.0 10 > th dose dependent rect. 15 6
965 292.20 temperature 10.0 270 > th dose dependent rect. 8 5
976 292.59 precipitation 0.1 10 < th dose independent rect. 14 7
977 292.59 precipitation 0.1 10 < th dose dependent rect. 14 7
978 292.63 atmosphere 1015.0 270 < th dose independent rect. 19 18
979 292.67 temperature 10.0 10 > th dose independent rect. 10 6
981 292.67 atmosphere 1015.0 10 < th dose independent rect. 10 6
982 292.67 precipitation 0.1 10 < th dose independent rect. 10 6
983 292.67 temperature 10.0 10 > th dose independent rect. 16 18
984 292.67 precipitation 0.1 10 < th dose dependent rect. 10 6
998 293.32 radiation 40.0 10 < th dose independent rect. 14 7
999 293.36 temperature 10.0 10 > th dose independent rect. 14 7