BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0701700 Os03g0701700|AK065161
(636 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0701700 Similar to Ethylene receptor 1156 0.0
Os05g0155200 Similar to Ethylene receptor homolog 818 0.0
Os04g0169100 Similar to Ethylene receptor 360 2e-99
Os02g0820900 Similar to Ethylene receptor 305 9e-83
Os07g0259100 Similar to Ethylene receptor 226 5e-59
AF497627 116 4e-26
Os01g0923700 Similar to Histidine kinase-like protein 115 9e-26
Os06g0654300 Histidine kinase, homodimeric domain containin... 101 2e-21
AK110426 86 1e-16
>Os03g0701700 Similar to Ethylene receptor
Length = 636
Score = 1156 bits (2990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/636 (89%), Positives = 569/636 (89%)
Query: 1 MDGCDCIEPLWPTDELLIKYQYISDFFIALAYFSIPLELIYFVKKSSFFPYRWVLIQFGA 60
MDGCDCIEPLWPTDELLIKYQYISDFFIALAYFSIPLELIYFVKKSSFFPYRWVLIQFGA
Sbjct: 1 MDGCDCIEPLWPTDELLIKYQYISDFFIALAYFSIPLELIYFVKKSSFFPYRWVLIQFGA 60
Query: 61 FIVLCGATHLINLWTFTTHTKTVAMVMTVAKVSTAVVSCATALMLVHIIPDLLSVKTREL 120
FIVLCGATHLINLWTFTTHTKTVAMVMTVAKVSTAVVSCATALMLVHIIPDLLSVKTREL
Sbjct: 61 FIVLCGATHLINLWTFTTHTKTVAMVMTVAKVSTAVVSCATALMLVHIIPDLLSVKTREL 120
Query: 121 FLKNKAEQLDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTIXXXXXXXXXXXXXXXXCA 180
FLKNKAEQLDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTI CA
Sbjct: 121 FLKNKAEQLDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGGTLGLEECA 180
Query: 181 LWMPSRSGSSLQLSHTLRHQITVGSTVSINLPVVNQVFSSNRAIIIPHTSPLARIRPLAG 240
LWMPSRSGSSLQLSHTLRHQITVGSTVSINLPVVNQVFSSNRAIIIPHTSPLARIRPLAG
Sbjct: 181 LWMPSRSGSSLQLSHTLRHQITVGSTVSINLPVVNQVFSSNRAIIIPHTSPLARIRPLAG 240
Query: 241 RYVPPEVAAVRVPLLHLSNFQINDWPELSAKSYAIMVLMLPSDSARKWXXXXXXXXXXXA 300
RYVPPEVAAVRVPLLHLSNFQINDWPELSAKSYAIMVLMLPSDSARKW A
Sbjct: 241 RYVPPEVAAVRVPLLHLSNFQINDWPELSAKSYAIMVLMLPSDSARKWHVHELELVEVVA 300
Query: 301 DQVAVALSHAAILEESMRARDLLMEQNVALDLXXXXXXXXXXXXNDFLAVMNHEMRTPMN 360
DQVAVALSHAAILEESMRARDLLMEQNVALDL NDFLAVMNHEMRTPMN
Sbjct: 301 DQVAVALSHAAILEESMRARDLLMEQNVALDLARREAEMAIRARNDFLAVMNHEMRTPMN 360
Query: 361 XXXXXXXXXXXXXXXPEQRLMVETVLKSSNLLATLINDVLDLSKLEDGSLELEIKAFNLH 420
PEQRLMVETVLKSSNLLATLINDVLDLSKLEDGSLELEIKAFNLH
Sbjct: 361 AIIALSSLLLETELTPEQRLMVETVLKSSNLLATLINDVLDLSKLEDGSLELEIKAFNLH 420
Query: 421 AVFKEVMSFIKPIAAIKRLSVSVMLAPDLPLCAIGDEKRLMQTILNISGNAVKFTKEGHI 480
AVFKEVMSFIKPIAAIKRLSVSVMLAPDLPLCAIGDEKRLMQTILNISGNAVKFTKEGHI
Sbjct: 421 AVFKEVMSFIKPIAAIKRLSVSVMLAPDLPLCAIGDEKRLMQTILNISGNAVKFTKEGHI 480
Query: 481 TLVASVVKADSLREFRTPDFHPTASDDNFYLKVQIKDTGCGISPQDLPQVFTKFAQSQPX 540
TLVASVVKADSLREFRTPDFHPTASDDNFYLKVQIKDTGCGISPQDLPQVFTKFAQSQP
Sbjct: 481 TLVASVVKADSLREFRTPDFHPTASDDNFYLKVQIKDTGCGISPQDLPQVFTKFAQSQPG 540
Query: 541 XXXXXXXXXXXXAICKRFVTLMGGHIWLDSEGTGRGCTVTFVIQLGICDNTNAYQQKLIP 600
AICKRFVTLMGGHIWLDSEGTGRGCTVTFVIQLGICDNTNAYQQKLIP
Sbjct: 541 GNRGYSGSGLGLAICKRFVTLMGGHIWLDSEGTGRGCTVTFVIQLGICDNTNAYQQKLIP 600
Query: 601 LVWPSSGDADFVGPVPNAPNEEKGQASLKSRYQRSI 636
LVWPSSGDADFVGPVPNAPNEEKGQASLKSRYQRSI
Sbjct: 601 LVWPSSGDADFVGPVPNAPNEEKGQASLKSRYQRSI 636
>Os05g0155200 Similar to Ethylene receptor homolog
Length = 635
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/601 (66%), Positives = 464/601 (77%), Gaps = 2/601 (0%)
Query: 1 MDG-CDCIEPLWPTDELLIKYQYISDFFIALAYFSIPLELIYFVKKSSFFPYRWVLIQFG 59
MDG CDCIEPLW D+LL+KYQYISDFFIALAYFSIPLELIYFVKKS+FFPYRWVLIQFG
Sbjct: 1 MDGSCDCIEPLWQADDLLVKYQYISDFFIALAYFSIPLELIYFVKKSAFFPYRWVLIQFG 60
Query: 60 AFIVLCGATHLINLWTFTTHTKTVAMVMTVAKVSTAVVSCATALMLVHIIPDLLSVKTRE 119
AFIVLCGATHLINLWTF +TKT+A+V+TVAK +TAVVSC TALMLVHIIPDLL+VK RE
Sbjct: 61 AFIVLCGATHLINLWTFAIYTKTIAVVLTVAKAATAVVSCITALMLVHIIPDLLNVKLRE 120
Query: 120 LFLKNKAEQLDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTIXXXXXXXXXXXXXXXXC 179
FLK+KA++LDREMG+IRTQEETGRHV MLTHEIRSTLDRHTI C
Sbjct: 121 RFLKDKADELDREMGIIRTQEETGRHVHMLTHEIRSTLDRHTILRTTLVELGRTLVLAEC 180
Query: 180 ALWMPSRSGSSLQLSHTLRHQITVGSTVSINLPVVNQVFSSNRAIIIPHTSPLARIRPLA 239
ALWMP+RSGS+LQLSHT+ + +GS V INLP+V++VF+SNR + IPHTSPLA I
Sbjct: 181 ALWMPTRSGSALQLSHTIYNSAAIGSVVPINLPIVSKVFNSNRVVKIPHTSPLASITADK 240
Query: 240 GRYVPPEVAAVRVPLLHLSNFQINDWPELSAKSYAIMVLMLPSDSARKWXXXXXXXXXXX 299
RYVPPEV A+RVPLLHL+NFQINDWPELSAKS+A+MVLMLP DSAR+W
Sbjct: 241 SRYVPPEVVAIRVPLLHLTNFQINDWPELSAKSFAVMVLMLPPDSAREWRPHERELVEVV 300
Query: 300 ADQVAVALSHAAILEESMRARDLLMEQNVALDLXXXXXXXXXXXXNDFLAVMNHEMRTPM 359
ADQVAVALSHAAILEESMRARDLLMEQN+ALD NDFLAVMNHEMRTPM
Sbjct: 301 ADQVAVALSHAAILEESMRARDLLMEQNIALDAARREAEMAICARNDFLAVMNHEMRTPM 360
Query: 360 NXXXXXXXXXXXXXXXPEQRLMVETVLKSSNLLATLINDVLDLSKLEDGSLELEIKAFNL 419
EQRLMVET+LKSS+LLATL NDVLD+SKLE+GSLELEI FNL
Sbjct: 361 RAIVSLSSLLLETNLSAEQRLMVETILKSSDLLATLTNDVLDVSKLENGSLELEIAPFNL 420
Query: 420 HAVFKEVMSFIKPIAAIKRLSVSVMLAPDLPLCAIGDEKRLMQTILNISGNAVKFTKEGH 479
H+ F +V++ IKP+AA KRLSV V LAP+LPL AIGD+KRLMQ ILN++GN++KFTKEGH
Sbjct: 421 HSTFTDVVNLIKPVAACKRLSVMVTLAPELPLHAIGDQKRLMQIILNVAGNSIKFTKEGH 480
Query: 480 ITLVASVVKADSLREFRTPDFHPTASDDNFYLKVQIKDTGCGISPQDLPQVFTKFAQSQP 539
+++ AS+ + D+LR PD+HP SD FYL VQ+KDTGCGISPQD+P F KFA +
Sbjct: 481 VSITASMARPDALRGPHEPDYHPVVSDGFFYLAVQVKDTGCGISPQDMPHTFRKFAHPE- 539
Query: 540 XXXXXXXXXXXXXAICKRFVTLMGGHIWLDSEGTGRGCTVTFVIQLGICDNTNAYQQKLI 599
A+ +RFV+LM G+IWL+SEG G+GCT F ++LG+ + NA +++
Sbjct: 540 NAGKWNSGSGLGLALSRRFVSLMEGNIWLESEGVGKGCTAMFFVKLGMPEKPNANLRRMA 599
Query: 600 P 600
P
Sbjct: 600 P 600
>Os04g0169100 Similar to Ethylene receptor
Length = 763
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 220/616 (35%), Positives = 325/616 (52%), Gaps = 30/616 (4%)
Query: 10 LWPTDELLIKYQYISDFFIALAYFSIPLELIYFVKKSSFFPYRWVLIQFGAFIVLCGATH 69
+W TD +L + Q +SDF IA+AYFSIPLEL+YF S FP +W+++QFGAFIVLCG TH
Sbjct: 43 IWSTDNIL-QCQRVSDFLIAMAYFSIPLELLYFATCSDLFPLKWIVLQFGAFIVLCGLTH 101
Query: 70 LINLWTFTTHTKTVAMVMTVAKVSTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAEQL 129
LI ++T+ H+ V + +TVAK TA+VS ATA+ L+ +IP LL VK RE FL+ KA +L
Sbjct: 102 LITMFTYEPHSFHVVLALTVAKFLTALVSFATAITLLTLIPQLLRVKVRENFLRIKAREL 161
Query: 130 DREMGLIRTQEETGRHVRMLTHEIRSTLDRHTIXXXXXXXXXXXXXXXXCALWMPSRSGS 189
DRE+G+++ QEE HVRMLTHEIR +LDRHTI CA+WMPS SGS
Sbjct: 162 DREVGMMKRQEEASWHVRMLTHEIRKSLDRHTILYTTMVELSKTLELQNCAVWMPSESGS 221
Query: 190 SLQLSHTLRHQITVGS---TVSINLPVVNQVFSSNRAIIIPHTSPLARIRPLAGRYVPPE 246
+ L+H LR T S +++++ P V ++ ++ A ++ S L G+
Sbjct: 222 EMILTHQLRQMETEDSNSLSIAMDNPDVLEIKATKDAKVLAADSALGIAS--RGKLEAGP 279
Query: 247 VAAVRVPLLHLSNFQINDWPELSAKSYAIMVLMLPSDSARKWXXXXXXXXXXXADQVAVA 306
VAA+R+P+L SNF+ PE+ SYAI+VL+LP D + W ADQVAVA
Sbjct: 280 VAAIRMPMLKASNFK-GGTPEVMETSYAILVLVLPEDGSLGWGEEELEIVEVVADQVAVA 338
Query: 307 LSHAAILEESMRARDLLMEQNVALDLXXXXXXXXXXXXNDFLAVMNHEMRTPMNXXXXXX 366
LSHAA+LEES R+ L Q+ L N F M MR PM+
Sbjct: 339 LSHAAVLEESQLMREKLAAQHRDLLRAKHETTMATEARNSFQTAMYDGMRRPMHSILGLV 398
Query: 367 XXXXXXXXXPEQRLMVETVLKSSNLLATLINDVLDLSKLEDGSLELEIKAFNLHAVFKEV 426
PEQRL+++ ++K+S++ +TL+NDV+ S + L L +AFNLH++ KE
Sbjct: 399 SMMQQENMNPEQRLVMDAIVKTSSVASTLMNDVMQTSTVNREYLSLVRRAFNLHSLVKEA 458
Query: 427 MSFIKPIAAIKRLSVSVMLAPDLPLCAIGDEKRLMQTILNISGNAVKFTKEGHITLVASV 486
+S ++ + K + + LP +GDEKR+ +L++ G ++ G ++L +
Sbjct: 459 ISVVRCLTGCKGIDFEFEVDNSLPERVVGDEKRVFHIVLHMVGTLIQRCNAGCLSLYVNT 518
Query: 487 VKADSLRE-----FRTPDFHPTASDDNFYLKVQIKDTGCGISPQDLPQVFTKFAQSQPXX 541
R R +F S +K +I+ I + + ++
Sbjct: 519 YNEKEERHNQDWMLRRANF----SGSYVCVKFEIR-----IRESRGNLLSSSSSRRLQGP 569
Query: 542 XXXXXXXXXXXAICKRFVTLMGGHIWLDSEGTGRGCTVTFVIQLGICDNTNAYQQKLIPL 601
+CK+ V +M G+IW S+ G G T+ +Q +Q + +
Sbjct: 570 NSTSSEMGLSFNMCKKIVQMMNGNIWSVSDSKGLGETIMLALQ---------FQLQHVTP 620
Query: 602 VWPSSGDADFVGPVPN 617
V +S D P+PN
Sbjct: 621 VSGASSDLFRSAPIPN 636
>Os02g0820900 Similar to Ethylene receptor
Length = 836
Score = 305 bits (780), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 194/586 (33%), Positives = 288/586 (49%), Gaps = 28/586 (4%)
Query: 10 LWPTDELLIKYQYISDFFIALAYFSIPLELIYFVKK-SSFFPYRWVLIQFGAFIVLCGAT 68
LW D + ++Q +SD IA AYFSIPLE++YFV P+RWVL+QFGAFIVLCG T
Sbjct: 121 LWSMDSIF-RWQKVSDLLIAAAYFSIPLEILYFVAGLRHLLPFRWVLVQFGAFIVLCGLT 179
Query: 69 HLINLWTFTTHTKTVAMVMTVAKVSTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAEQ 128
HL+ +T+ H V +++T AK TA+VS TA+ L+ +IP LL VK RE L KA +
Sbjct: 180 HLLTAFTYEPHPFMVVLLLTTAKFLTALVSFLTAITLLTLIPQLLRVKVRESLLWLKARE 239
Query: 129 LDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTIXXXXXXXXXXXXXXXXCALWMPSRSG 188
LDRE+ L++ QEE HVRMLTHEIR +LDRHT+ CA+WMP +
Sbjct: 240 LDREVVLMKRQEEASWHVRMLTHEIRKSLDRHTVLYTTLIELSRVLGLTNCAVWMP--AA 297
Query: 189 SSLQLSHTLRHQITVGSTVSINLPVVNQVFSSNRAIIIPHTSPLARIRPLAGRYVPPEVA 248
+ L+H LR V + + + + VA
Sbjct: 298 GEMCLTHELRRDGGGEDGVVGVDDADVVEVRGSDGVKLLGPDSVLAAASGGKEEGTGAVA 357
Query: 249 AVRVPLLHLSNFQINDWPELSAKSYAIMVLMLPSDSARKWXXXXXXXXXXXADQVAVALS 308
A+R+P+L +S+F+ PE+ SYA++VL+ P + + W A QVAVALS
Sbjct: 358 AIRMPMLKVSDFK-GGTPEVIQTSYAVLVLVPP--AGKSWGRHEMEIVEVVAGQVAVALS 414
Query: 309 HAAILEESMRARDLLMEQNVALDLXXXXXXXXXXXXNDFLAVMNHEMRTPMNXXXXXXXX 368
HA +LEES RD L EQN L F VM+ MR P++
Sbjct: 415 HATLLEESRAMRDRLAEQNRELLQARRDALMANEARQAFQGVMSQGMRRPIHSILGLVSM 474
Query: 369 XXXXXXXPEQRLMVETVLKSSNLLATLINDVLDLSKLEDGSLELEIKAFNLHAVFKEVMS 428
PEQRL+V+T+ +++ +++TL+NDV+++S LE + F+LHA+ ++
Sbjct: 475 VQEEALAPEQRLVVDTMARTATVVSTLVNDVMEMSADSRERFPLETRPFHLHAMIRDAAC 534
Query: 429 FIKPIAAIKRLSVSVMLAPDLPLCAIGDEKRLMQTILNISGNAVKFTKEGHITLVASVVK 488
+ + + +V + LP +GDE+R+ +L++ GN + T+ GH+TL
Sbjct: 535 VARCLCDFRGFGFAVHVENALPDLVVGDERRIFHVLLHMVGNLIGRTEPGHVTLRVRAAD 594
Query: 489 ADSLREFRT-------PDFHPTASDDNFYLKVQIKDTGCGISPQDLPQVFTKFAQSQPXX 541
D L + P + S F + V+ + G SP +P
Sbjct: 595 DDVLDDRLGQRWDPWWPSYSTGYSSVKFVIGVKRQQNGDAGSP----------LSRRP-- 642
Query: 542 XXXXXXXXXXXAICKRFVTLMGGHIW--LDSEGTGRGCTVTFVIQL 585
++C++ V +M G+IW LD +G T+ QL
Sbjct: 643 SGKGIDLRLSFSMCRKLVQMMQGNIWAILDPQGLPESMTLVLRFQL 688
>Os07g0259100 Similar to Ethylene receptor
Length = 777
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 194/602 (32%), Positives = 288/602 (47%), Gaps = 46/602 (7%)
Query: 15 ELLIKYQYISDFFIALAYFSIPLELIYFVKKSSFFPYRWVLIQFGAFIVLCGATHLINLW 74
E L++ Q +SD IA ++ SIPLEL YF + + ++ F AFIVLCGATHL+ +
Sbjct: 38 EALMQCQRVSDLLIAASFLSIPLELFYFATCADLSEVKCAVLHFCAFIVLCGATHLLAAF 97
Query: 75 TFT-THTKTVAMVMTVAKVSTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAEQLDREM 133
T H+ + +T AKV AV S A A+ L+ IP LL +K RE L++KA +L R++
Sbjct: 98 THAHPHSAPLLRALTAAKVLAAVASSAAAVSLLTFIPKLLRIKVRESLLRDKASRLHRDL 157
Query: 134 GLIRTQEE-TGRHVRMLTHEIRST-LDRHTIXXXXXXXXXXXXXXXXCALWMPSRSG-SS 190
GL+R +EE T R VR LT IR++ D H I CA+WMP+
Sbjct: 158 GLVRRREEATSRAVRELTGRIRASPPDAHAILRTTALQLADALGLHACAVWMPAAGRPHD 217
Query: 191 LQLSHTLRHQ--------ITVGS--TVSINLPVVNQVFSSNRAIIIPHTSPLARIRPLAG 240
L L H L + + VG TV+ + P V V +S A ++ S LA + G
Sbjct: 218 LVLVHHLTSRPDDAADLLLEVGDACTVAADDPDVVDVMASKVAKVLGPDSALA-MASSVG 276
Query: 241 RYVPPEVAAVRVPLLHLSNFQINDWPELSAKSYAIMVLML-PSDSARKWXXXXXXXXXXX 299
VAA+R+P+L +S + PE++ SYAI+VL+L P D+A W
Sbjct: 277 AAPAGAVAAIRIPILRVSIYDGGGTPEVTEASYAILVLLLPPHDAAGGWSSHDLEIVQVV 336
Query: 300 ADQVAVALSHAAILEESMRARDLLMEQNVALDLXXXXXXXXXXXXNDFLAVMNHEMRTPM 359
ADQ AVALSHAA+LEES RD EQ+ AL + + M H MR P+
Sbjct: 337 ADQAAVALSHAAVLEESRSMRDRFAEQHRALMQAKHRAAMATRAFSSIQSAMCHAMRRPV 396
Query: 360 NXXXXXXXXXX---XXXXXPEQRLMVETVLKSSNLLATLINDVLDLSKLEDGSLELEIKA 416
+ PEQRL V+ + ++SNLL+ L+++V + L ++ K
Sbjct: 397 HSVVGLVSMLQHPEADTMRPEQRLAVDAIARTSNLLSALMDEV----TVNRQHLSVQRKP 452
Query: 417 FNLHAVFKEVMSFIKPIAAIKRLSVSVMLAPD--LPLCAIGDEKRLMQTILNISGNAVKF 474
F+LHA+ KE +S ++ + P+ LP +GDE+R+ +L++ G +
Sbjct: 453 FSLHALIKEAISVAGCLSHCG--GAGFLHQPECALPEWVVGDERRVFHLLLDMVGTLLNR 510
Query: 475 --TKEGHITLVASVVKADSLREFRTPDF---HPTASDDNFYLKVQI---KDTGCGIS--- 523
T G L SV + E + D+ PT S N +K ++ + C I
Sbjct: 511 CNTGSGACRLSFSVRICNVGEERYSLDWIPMRPTFSGCNVCVKFKVGIGRSRSCAIERSL 570
Query: 524 PQDLPQVFTKFAQSQPXXXXXXXXXXXXXAICKRFVTLMGGHIWLDSEGTGRGCTVTFVI 583
P +LP+ SQ + V +M G++W S+ G G +VT ++
Sbjct: 571 PCELPRRSAATTSSQ--------MGHIFSGYFNKIVQMMNGNMWSASDSEGVGESVTLIL 622
Query: 584 QL 585
Q
Sbjct: 623 QF 624
>AF497627
Length = 653
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 17/229 (7%)
Query: 347 FLAVMNHEMRTPMNXXXXXXXXXXXXXXXPEQRLMVETVLKSSNLLATLINDVLDLSKLE 406
FLA M+HE+RTP+N +Q+ ++ V + L ++ND+LDLSK+E
Sbjct: 180 FLANMSHEIRTPLNAIIGFTELLSGTPLDKQQQAFIQDVQTAGENLLLIVNDILDLSKIE 239
Query: 407 DGSLELEIKAFNLHAVFKEVMSFIKPIAAIKRLSVSVMLAPDLPLCAIGDEKRLMQTILN 466
G L LE + FNL + V +K + + ++ L +LP GD+ RL Q ++N
Sbjct: 240 SGGLSLEKQPFNLKKSLRHVYDLLK-VKTADGVEFNLYLDAELPDVITGDQGRLNQIMVN 298
Query: 467 ISGNAVKFTKEGHITLVASVVKADSLREFRTPDFHPTASDDNFYLKVQIKDTGCGISPQD 526
++GNA+KFT EG +T+ + ++D++ ++ +KDTG GI +
Sbjct: 299 LAGNALKFTNEGEVTISVK---------------NKGETEDSYTIRFSVKDTGIGIPKEH 343
Query: 527 LPQVFTKFAQSQPXXXXXXXXXXXXXAICKRFVTLMGGHIWLDS-EGTG 574
L +F +F Q Q +I K V L I + S EG G
Sbjct: 344 LESIFERFTQGQEDTTRKFGGTGLGLSIVKELVKLHDSKIQVKSREGAG 392
>Os01g0923700 Similar to Histidine kinase-like protein
Length = 866
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 124/284 (43%), Gaps = 37/284 (13%)
Query: 345 NDFLAVMNHEMRTPMNXXXXXXXXXXXXXXXPEQRLMVETVLKSSNLLATLINDVLDLSK 404
+ FLA ++HE+RTPMN Q+ V T S L +LIN+VLD +K
Sbjct: 283 SQFLATVSHEIRTPMNGVLGMLQMLMDTDLDTTQQDYVRTAQASGKALVSLINEVLDQAK 342
Query: 405 LEDGSLELEIKAFNLHAVFKEVMSFIKPIAAIKRLSVSVMLAPDLPLCAIGDEKRLMQTI 464
+E G LELE F+L V +++S A K L ++V ++ +P IGD R+ Q I
Sbjct: 343 IESGKLELETVPFDLRTVCDDILSLFCGKAQEKGLELAVYVSDQVPQILIGDPGRIRQII 402
Query: 465 LNISGNAVKFTKEGHITLVASVVKA-----------------------------DSLREF 495
N+ GN++KFT+ GHI L VV+ +S+R F
Sbjct: 403 TNLVGNSIKFTERGHIYLTVHVVEEVMSCLEVETGIQNTNTLSGYPVANRRCSWESIRLF 462
Query: 496 R------TPDFHPTASDDNFYLKVQIKDTGCGISPQDLPQVFTKFAQSQPXXXXXXXXXX 549
F P AS D+ L + ++DTG GI + +VFT F Q P
Sbjct: 463 NRELHSSEKSFAPIAS-DSISLVISVEDTGVGIPFEAQSRVFTPFMQVGPSIARIHGGTG 521
Query: 550 XXXAICKRFVTLMGGHIWLDSE-GTGRGCTVTFVIQLGICDNTN 592
+I K V LM G I S+ G T T V+ C +
Sbjct: 522 IGLSISKCLVGLMKGEIGFASKPHVGSTFTFTAVLMRAHCKGND 565
>Os06g0654300 Histidine kinase, homodimeric domain containing protein
Length = 1067
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 132/314 (42%), Gaps = 54/314 (17%)
Query: 347 FLAVMNHEMRTPMNXXXXXXXXXXXXXXXPEQRLMVETVLKSSNLLATLINDVLDLSKLE 406
LA M+HE+R+P++ EQ ++E +L S +L+ LIND+LDLSK+E
Sbjct: 468 MLATMSHEIRSPLSGVLSMAEILATTKLDKEQYQLLEVMLSSGDLVLQLINDILDLSKVE 527
Query: 407 DGSLELEIKAFNLHAVFKEVMSFIKPIAAIKRLSVSVMLAPDLPLCAIGDEKRLMQTILN 466
G+++LE F V K V+ + K L + + ++PL GD R+ Q + N
Sbjct: 528 SGAMKLEATTFRPREVVKHVLQ-TAAASLKKELILEGCIGDNVPLEVTGDVLRIRQILTN 586
Query: 467 ISGNAVKFTKEGHITLVASVVKA------------------------------------D 490
+ NAVKFT EG + + V+ D
Sbjct: 587 LISNAVKFTHEGKVGINLHVLDKQLPGCRIEGGQLHSKAHSAPAAAAEHFSASPRKCDND 646
Query: 491 SLREFRTPDFHPTA--SDDNF----------YLKVQIKDTGCGISPQDLPQVFTKFAQSQ 538
+L D T S+DNF +L+ + DTG GI + LP +F ++ Q+
Sbjct: 647 TLGCSNHEDACQTGIPSNDNFGEHHEGDEVVWLRCDVYDTGIGIPEKSLPLLFKRYMQAS 706
Query: 539 PXXXXXXXXXXXXXAICKRFVTLMGGHIWLDSEGTGRGCTVTFVIQLGICDNTNAYQQKL 598
AICK+ V LMGG + + S+ G T +FV+ I +
Sbjct: 707 DDHARKYGGTGLGLAICKQLVELMGGTLTVVSK-ENEGSTFSFVLPCKIPVKEDHSDD-- 763
Query: 599 IPLVWPSSGDADFV 612
P PSSG DF
Sbjct: 764 -PDDMPSSG-GDFT 775
>AK110426
Length = 835
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 107/250 (42%), Gaps = 40/250 (16%)
Query: 347 FLAVMNHEMRTPMNXXXXXXXXXXXXXXXPEQRLMVETVLKSSNLLATLINDVLDLSKLE 406
FLA M+HE+RTPM+ + ++ L L+ND+LD +++E
Sbjct: 383 FLANMSHELRTPMHGIIAMAKDLMEMPLSEGACESARIISDCADHLLGLVNDILDFARIE 442
Query: 407 DGSLELEI----------KAFNLHAVFKEVMSFIKPIAAIKRLSVSVMLAPDLPLCAIGD 456
LELE KA +LH + M+ K +A I + ++ L +GD
Sbjct: 443 SNQLELESIPLSVCEEVDKAVSLHTI----MAKKKQVALISEIDIAQPLR-------LGD 491
Query: 457 EKRLMQTILNISGNAVKFT-KEGHITLVASVVKADSLREFRTPDFHPTASDDNFYLKVQI 515
R Q + N+ NA+KFT EG + + AS AD P+ + V +
Sbjct: 492 PLRFRQILHNLLSNAIKFTPAEGRVMVSASTGPAD-------PEI----------VSVSV 534
Query: 516 KDTGCGISPQDLPQVFTKFAQSQPXXXXXXXXXXXXXAICKRFVTLMGGHIWLDSEGTGR 575
DTG GI PQ L +F F+Q AI K+ M G I ++SE G+
Sbjct: 535 ADTGIGIPPQGLINIFKSFSQLDASVGRKYGGSGLGLAISKKLSLAMQGDITVESE-VGK 593
Query: 576 GCTVTFVIQL 585
G TF ++L
Sbjct: 594 GSVFTFTVRL 603
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.135 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,688,995
Number of extensions: 634531
Number of successful extensions: 1204
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1176
Number of HSP's successfully gapped: 9
Length of query: 636
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 529
Effective length of database: 11,448,903
Effective search space: 6056469687
Effective search space used: 6056469687
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 159 (65.9 bits)