Os05g0155200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ethylene receptor homolog.
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Os05g0155200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ethylene receptor homolog.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.2 | 0.491 | 9.54 | 0.0344 | 1.95 | -0.788 | 0.763 | 3.98 | -0.321 | 22.4 | 93.71 | 181 | -- | -- |
| 119.45 | 0.509 | 9.56 | 0.159 | 1.93 | -0.634 | 1.02 | -- | -0.346 | 22.6 | 89.81 | 301 | -- | -- |
| 111.35 | 0.491 | 9.53 | 0.00269 | 1.96 | -0.71 | -- | 3.79 | -0.319 | 22.3 | 93.49 | 166 | -- | -- |
| 118.01 | 0.506 | 9.57 | 0.122 | 1.7 | -0.846 | -- | -- | -0.372 | 22.8 | 85 | 503 | -- | -- |
| 217.58 | 0.687 | 9.55 | 0.141 | -- | -2.32 | -- | 0.0291 | -0.504 | -- | 78.14 | 809 | -- | -- |
| 126.76 | 0.528 | 9.54 | 0.00971 | 1.97 | -- | 0.704 | -- | -0.249 | 22.2 | -- | -- | -- | -- |
| 128.71 | 0.531 | 9.54 | -0.0172 | 1.97 | -- | -- | -- | -0.25 | 22.1 | -- | -- | -- | -- |
| 216.02 | 0.685 | 9.54 | 0.0421 | -- | -2.34 | -- | -- | -0.462 | -- | 72 | 843 | -- | -- |
| 117.99 | 0.506 | 9.56 | -- | 1.72 | -0.777 | -- | -- | -0.375 | 22.7 | 84.6 | 515 | -- | -- |
| 363.2 | 0.891 | 9.49 | 0.00936 | -- | -- | -- | -- | -0.247 | -- | -- | -- | -- | -- |
| 128.72 | 0.531 | 9.54 | -- | 1.97 | -- | -- | -- | -0.248 | 22.1 | -- | -- | -- | -- |
| 216.07 | 0.685 | 9.54 | -- | -- | -2.34 | -- | -- | -0.466 | -- | 71.82 | 844 | -- | -- |
| 363.2 | 0.89 | 9.49 | -- | -- | -- | -- | -- | -0.248 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.86 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 8 |
| 4 | 97.22 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 9 |
| 5 | 97.27 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 2 |
| 8 | 97.46 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 4 |
| 18 | 98.30 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 9 |
| 19 | 98.32 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 6 |
| 20 | 98.34 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 22 | 98.52 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 1 |
| 37 | 98.99 | temperature | 20 | 720 | < th | dose independent | rect. | 2 | 7 |
| 38 | 98.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 8 |
| 52 | 99.49 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 8 |
| 117 | 100.61 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 121 | 100.70 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 6 |
| 137 | 100.97 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 179 | 101.60 | temperature | 20 | 720 | < th | dose independent | sin | 6 | NA |
| 206 | 101.91 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 1 |
| 219 | 102.01 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 17 |
| 269 | 102.64 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 12 |
| 273 | 102.66 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 8 |
| 278 | 102.71 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 2 |
| 308 | 103.09 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 310 | 103.09 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 14 |
| 367 | 103.48 | temperature | 25 | 720 | < th | dose dependent | sin | 5 | NA |
| 454 | 104.23 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 16 |
| 470 | 104.33 | humidity | 90 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 473 | 104.35 | humidity | 90 | 270 | > th | dose dependent | rect. | 17 | 13 |
| 490 | 104.42 | humidity | 90 | 270 | > th | dose dependent | rect. | 19 | 11 |
| 496 | 104.44 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 1 |
| 500 | 104.46 | humidity | 90 | 270 | > th | dose independent | rect. | 17 | 14 |
| 578 | 105.00 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 582 | 105.02 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 614 | 105.19 | wind | 9 | 4320 | > th | dose independent | rect. | 5 | 11 |
| 625 | 105.23 | wind | 9 | 4320 | > th | dose dependent | rect. | 12 | 2 |
| 629 | 105.24 | wind | 9 | 4320 | > th | dose dependent | rect. | 5 | 9 |
| 635 | 105.27 | temperature | 30 | 270 | < th | dose dependent | sin | 2 | NA |
| 651 | 105.34 | wind | 9 | 4320 | > th | dose dependent | rect. | 9 | 5 |
| 657 | 105.35 | wind | 9 | 4320 | > th | dose independent | rect. | 9 | 7 |
| 659 | 105.35 | temperature | 25 | 270 | < th | dose independent | rect. | 17 | 14 |
| 682 | 105.48 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 14 |
| 686 | 105.50 | temperature | 30 | 30 | < th | dose dependent | sin | 0 | NA |
| 691 | 105.53 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 18 |
| 695 | 105.55 | wind | 9 | 4320 | > th | dose dependent | rect. | 5 | 11 |
| 703 | 105.59 | wind | 9 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 750 | 105.75 | wind | 9 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 843 | 106.08 | humidity | 90 | 270 | > th | dose dependent | sin | 13 | NA |
| 903 | 106.27 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 911 | 106.29 | wind | 7 | 4320 | > th | dose dependent | rect. | 15 | 1 |