Os07g0259100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ethylene receptor.
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Os07g0259100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ethylene receptor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.07 | 0.486 | 3.2 | -0.238 | 0.00904 | -0.421 | 0.3 | 2.86 | -0.0812 | 21.1 | 1.042 | 12 | -- | -- |
| 113.8 | 0.501 | 3.18 | -0.128 | 0.0408 | -0.246 | -0.389 | -- | -0.0609 | 5.78 | 0.9999 | 4 | -- | -- |
| 107.19 | 0.486 | 3.2 | -0.265 | 0.00571 | -0.388 | -- | 2.65 | -0.0809 | 4.76 | 1.042 | 12 | -- | -- |
| 114.17 | 0.501 | 3.18 | -0.131 | 0.0388 | -0.249 | -- | -- | -0.0595 | 5.06 | 0.9996 | 4 | -- | -- |
| 107.19 | 0.485 | 3.2 | -0.265 | -- | -0.39 | -- | 2.65 | -0.0808 | -- | 1.042 | 12 | -- | -- |
| 115.49 | 0.504 | 3.17 | -0.111 | 0.0876 | -- | -0.407 | -- | -0.0577 | 5.43 | -- | -- | -- | -- |
| 115.86 | 0.504 | 3.17 | -0.113 | 0.0873 | -- | -- | -- | -0.0561 | 4.43 | -- | -- | -- | -- |
| 114.19 | 0.498 | 3.18 | -0.139 | -- | -0.271 | -- | -- | -0.0544 | -- | 0.9752 | 4 | -- | -- |
| 114.62 | 0.501 | 3.17 | -- | 0.0383 | -0.239 | -- | -- | -0.0448 | 5.12 | 0.9028 | 4 | -- | -- |
| 116.27 | 0.504 | 3.17 | -0.109 | -- | -- | -- | -- | -0.0538 | -- | -- | -- | -- | -- |
| 116.2 | 0.504 | 3.17 | -- | 0.0852 | -- | -- | -- | -0.0436 | 4.46 | -- | -- | -- | -- |
| 114.69 | 0.5 | 3.17 | -- | -- | -0.252 | -- | -- | -0.0441 | -- | 0.9752 | 4 | -- | -- |
| 116.59 | 0.504 | 3.17 | -- | -- | -- | -- | -- | -0.0417 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.60 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 2 |
| 3 | 100.04 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 4 | 100.09 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 5 | 100.16 | wind | 5.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 6 | 100.16 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 7 | 100.16 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 21 | 100.34 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 23 | 100.34 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 24 | 100.34 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 27 | 100.34 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 28 | 100.34 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 30 | 100.34 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 35 | 100.34 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 36 | 100.34 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 37 | 100.34 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 42 | 100.34 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 44 | 100.38 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 49 | 100.49 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 56 | 101.08 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 64 | 101.51 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 66 | 101.73 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 79 | 102.17 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 114 | 103.86 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 4 |
| 115 | 103.90 | wind | 3.0 | 30 | < th | dose dependent | rect. | 24 | 4 |
| 133 | 104.50 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 134 | 104.50 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 137 | 104.50 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 141 | 104.50 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 150 | 104.50 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 151 | 104.50 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 171 | 104.50 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 184 | 104.71 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 195 | 105.32 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 215 | 105.92 | wind | 1.0 | 10 | > th | dose independent | sin | 8 | NA |
| 221 | 106.05 | wind | 1.0 | 10 | < th | dose independent | rect. | 24 | 9 |
| 225 | 106.09 | wind | 1.0 | 10 | < th | dose independent | rect. | 13 | 15 |
| 231 | 106.14 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 11 |
| 233 | 106.16 | wind | 1.0 | 10 | < th | dose independent | rect. | 21 | 7 |
| 245 | 106.26 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 246 | 106.26 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 309 | 107.00 | wind | 1.0 | 10 | > th | dose independent | rect. | 19 | 16 |
| 312 | 107.04 | wind | 1.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 326 | 107.27 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 11 |
| 332 | 107.30 | wind | 1.0 | 10 | < th | dose independent | sin | 8 | NA |
| 362 | 107.45 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 16 |
| 367 | 107.48 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 14 |
| 370 | 107.51 | wind | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 436 | 107.79 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 20 |
| 459 | 107.91 | wind | 1.0 | 10 | < th | dose independent | rect. | 24 | 13 |
| 472 | 107.97 | wind | 1.0 | 10 | < th | dose independent | rect. | 24 | 18 |
| 482 | 108.00 | wind | 1.0 | 10 | < th | dose independent | rect. | 24 | 16 |
| 485 | 108.01 | wind | 3.0 | 30 | < th | dose dependent | rect. | 24 | 9 |
| 534 | 108.39 | wind | 1.0 | 10 | > th | dose independent | rect. | 1 | 23 |
| 536 | 108.39 | wind | 3.0 | 30 | < th | dose dependent | rect. | 21 | 7 |
| 540 | 108.43 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 4 |
| 541 | 108.43 | wind | 1.0 | 10 | > th | dose independent | rect. | 19 | 23 |
| 561 | 108.58 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 587 | 108.69 | wind | 3.0 | 30 | < th | dose dependent | rect. | 17 | 11 |
| 650 | 108.83 | wind | 1.0 | 10 | < th | dose independent | rect. | 15 | 23 |
| 653 | 108.84 | wind | 1.0 | 10 | < th | dose independent | no | NA | NA |
| 663 | 108.84 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 23 |
| 676 | 108.85 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 21 |
| 679 | 108.85 | wind | 3.0 | 30 | < th | dose dependent | rect. | 13 | 15 |
| 777 | 109.05 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 795 | 109.13 | wind | 1.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 838 | 109.22 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 24 | 4 |
| 839 | 109.22 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 5 |
| 848 | 109.25 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 861 | 109.28 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 4 | 7 |
| 862 | 109.28 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 7 |
| 886 | 109.39 | wind | 1.0 | 10 | > th | dose independent | rect. | 23 | 23 |
| 921 | 109.46 | wind | 1.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 944 | 109.51 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 12 | 2 |
| 953 | 109.53 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 12 | 1 |