Os04g0169100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ethylene receptor.
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Os04g0169100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ethylene receptor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 224.39 | 0.704 | 9.75 | 1.08 | 2.75 | -1.38 | -0.699 | 2.7 | 0.44 | 22 | 80.02 | 1314 | -- | -- |
| 233.29 | 0.711 | 9.78 | 0.832 | 2.8 | -1.2 | -0.506 | -- | 0.435 | 22.1 | 84 | 1276 | -- | -- |
| 226.17 | 0.7 | 9.75 | 1.1 | 2.74 | -1.37 | -- | 2.59 | 0.445 | 22 | 80.29 | 1333 | -- | -- |
| 234.28 | 0.713 | 9.79 | 0.839 | 2.77 | -1.19 | -- | -- | 0.422 | 22 | 83.63 | 1302 | -- | -- |
| 597.37 | 1.14 | 9.72 | 0.748 | -- | -1.81 | -- | 3.47 | 0.365 | -- | 84 | 1520 | -- | -- |
| 265.04 | 0.763 | 9.78 | 0.643 | 2.68 | -- | -0.633 | -- | 0.447 | 21.9 | -- | -- | -- | -- |
| 266.56 | 0.765 | 9.78 | 0.668 | 2.68 | -- | -- | -- | 0.449 | 21.8 | -- | -- | -- | -- |
| 612.71 | 1.16 | 9.72 | 0.715 | -- | -1.73 | -- | -- | 0.406 | -- | 88.22 | 1514 | -- | -- |
| 252.45 | 0.74 | 9.79 | -- | 2.79 | -1.13 | -- | -- | 0.408 | 22.1 | 128.8 | 1274 | -- | -- |
| 696.29 | 1.23 | 9.71 | 0.696 | -- | -- | -- | -- | 0.447 | -- | -- | -- | -- | -- |
| 278.33 | 0.78 | 9.8 | -- | 2.68 | -- | -- | -- | 0.374 | 21.8 | -- | -- | -- | -- |
| 624.07 | 1.17 | 9.73 | -- | -- | -1.73 | -- | -- | 0.354 | -- | 91 | 1518 | -- | -- |
| 709.08 | 1.24 | 9.73 | -- | -- | -- | -- | -- | 0.37 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 215.27 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 5 | 220.93 | radiation | 1.0 | 30 | > th | dose independent | sin | 3 | NA |
| 6 | 221.14 | radiation | 1.0 | 30 | < th | dose independent | sin | 5 | NA |
| 8 | 221.66 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 12 | 222.49 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 15 | 222.99 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 22 | 223.33 | radiation | 1.0 | 30 | < th | dose dependent | sin | 4 | NA |
| 24 | 223.39 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 24 | 14 |
| 26 | 223.56 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 29 | 223.61 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 23 |
| 30 | 223.63 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 31 | 223.64 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 33 | 223.72 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 12 |
| 34 | 223.74 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 6 | NA |
| 37 | 223.77 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 43 | 223.82 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 18 |
| 74 | 224.53 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 15 |
| 85 | 224.75 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 14 |
| 87 | 224.78 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 91 | 224.82 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 94 | 224.84 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 108 | 225.00 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 15 |
| 154 | 225.33 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 162 | 225.43 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 192 | 225.71 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 2 |
| 220 | 225.97 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 13 |
| 262 | 226.24 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 291 | 226.38 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 327 | 226.59 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 350 | 226.72 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 365 | 226.83 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 9 | 9 |
| 382 | 226.83 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 15 |
| 428 | 226.98 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 437 | 227.02 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 442 | 227.04 | humidity | 80.0 | 1440 | < th | dose dependent | no | NA | NA |
| 447 | 227.06 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 450 | 227.07 | humidity | 70.0 | 720 | > th | dose independent | rect. | 14 | 14 |
| 455 | 227.08 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 17 | 5 |
| 463 | 227.10 | humidity | 50.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 525 | 227.30 | radiation | 10.0 | 1440 | > th | dose independent | sin | 22 | NA |
| 543 | 227.35 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 550 | 227.39 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 579 | 227.55 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 11 |
| 589 | 227.64 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 594 | 227.65 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 623 | 227.76 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 630 | 227.79 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 13 |
| 633 | 227.80 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 661 | 227.94 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 7 |
| 693 | 228.02 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 10 | 18 |
| 720 | 228.12 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 768 | 228.23 | radiation | 10.0 | 1440 | > th | dose independent | no | NA | NA |
| 850 | 228.25 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 865 | 228.32 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 911 | 228.49 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 9 | 7 |
| 948 | 228.64 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 959 | 228.70 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 13 | 16 |
| 981 | 228.80 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 9 | 4 |