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Os03g0701700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Ethylene receptor.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0185) R2 : 0.00189
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0361 (0.0389) R2dN8 : 0.00244 R2N8 : 0.00189
σ : 0.348
deviance : 55.58
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.98 0.239 12.7 0.788 0.598 -0.431 0.695 1.53 0.191 23.4 21.39 1440 -- --
26.8 0.241 12.7 0.461 0.598 -0.524 0.725 -- 0.112 23.5 13.49 7322 -- --
27.87 0.246 12.7 0.827 0.628 -0.461 -- 1.86 0.207 23.3 20.81 1237 -- --
28.16 0.249 12.7 0.291 0.463 -0.6 -- -- 0.0803 21.7 20.81 1237 -- --
40.14 0.297 12.7 0.346 -- -0.786 -- 0.0997 0.113 -- 20.81 1237 -- --
31.59 0.263 12.7 0.195 0.581 -- 0.718 -- -0.0192 23.4 -- -- -- --
33.74 0.272 12.7 0.167 0.58 -- -- -- -0.0211 23.2 -- -- -- --
40.15 0.296 12.7 0.329 -- -0.78 -- -- 0.108 -- 20.81 1237 -- --
30.24 0.258 12.7 -- 0.478 -0.505 -- -- 0.0339 22 20.81 1237 -- --
54.72 0.346 12.7 0.18 -- -- -- -- -0.0161 -- -- -- -- --
34.47 0.275 12.7 -- 0.581 -- -- -- -0.0397 23.2 -- -- -- --
42.91 0.306 12.7 -- -- -0.713 -- -- 0.0625 -- 20.81 1237 -- --
55.58 0.348 12.7 -- -- -- -- -- -0.0361 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.00 temperature 15 10 > th dose dependent rect. 6 16
3 23.21 temperature 20 270 > th dose dependent rect. 4 5
4 23.30 temperature 20 270 > th dose dependent rect. 3 7
5 23.30 temperature 10 270 > th dose dependent rect. 5 17
12 23.61 temperature 10 720 > th dose dependent rect. 3 6
14 23.66 temperature 20 720 > th dose dependent rect. 23 10
16 23.72 temperature 10 720 > th dose dependent sin 7 NA
20 23.82 temperature 15 720 > th dose dependent rect. 21 14
21 23.84 temperature 30 720 < th dose dependent rect. 24 15
23 23.86 temperature 30 720 < th dose dependent rect. 1 12
38 23.95 temperature 30 720 < th dose dependent sin 4 NA
46 24.00 temperature 30 720 < th dose dependent rect. 2 9
51 24.03 temperature 20 720 > th dose independent rect. 4 3
104 24.26 temperature 25 720 < th dose dependent rect. 4 5
110 24.30 temperature 10 270 > th dose dependent rect. 3 21
152 24.46 temperature 25 720 < th dose dependent rect. 5 2
171 24.52 temperature 15 10 > th dose dependent rect. 6 18
245 24.75 temperature 20 720 < th dose independent rect. 4 3
247 24.75 temperature 30 270 < th dose dependent rect. 9 8
255 24.77 temperature 30 90 < th dose dependent rect. 11 8
299 24.87 temperature 30 720 < th dose dependent rect. 7 3
307 24.88 temperature 25 10 > th dose independent rect. 6 5
317 24.89 temperature 10 720 > th dose dependent rect. 12 21
396 25.10 temperature 15 10 > th dose dependent rect. 6 14
416 25.15 temperature 20 10 > th dose dependent sin 4 NA
423 25.15 temperature 30 30 < th dose dependent rect. 11 19
448 25.21 temperature 20 1440 > th dose dependent rect. 18 1
466 25.23 temperature 20 1440 > th dose dependent rect. 17 4
484 25.26 temperature 20 720 > th dose independent rect. 23 10
486 25.26 temperature 20 1440 > th dose dependent rect. 15 7
503 25.29 temperature 25 10 > th dose dependent sin 9 NA
579 25.40 temperature 25 1440 > th dose dependent rect. 12 7
589 25.41 radiation 1 270 < th dose dependent rect. 20 23
591 25.42 temperature 30 720 < th dose dependent rect. 9 1
619 25.45 temperature 20 720 < th dose independent rect. 2 11
648 25.47 temperature 30 90 < th dose dependent rect. 1 18
663 25.48 atmosphere 995 30 > th dose dependent rect. 11 19
704 25.53 temperature 30 30 < th dose independent rect. 11 19
741 25.56 temperature 25 1440 > th dose independent rect. 10 12
760 25.58 temperature 30 10 < th dose dependent rect. 2 17
773 25.60 temperature 20 1440 > th dose dependent sin 16 NA
811 25.63 temperature 25 1440 > th dose independent rect. 15 7
812 25.63 temperature 25 1440 < th dose independent rect. 15 7
856 25.66 temperature 20 720 > th dose dependent rect. 23 17
875 25.68 temperature 25 30 > th dose independent rect. 1 10
876 25.68 temperature 25 1440 < th dose independent rect. 10 12
926 25.71 temperature 30 10 < th dose dependent rect. 24 19
930 25.72 temperature 30 14400 < th dose independent rect. 15 1
932 25.72 temperature 30 1440 < th dose dependent rect. 18 1
986 25.75 temperature 30 1440 < th dose dependent rect. 18 3