BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0693400 Os03g0693400|AK109332
(177 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0693400 Protein of unknown function DUF538 family protein 300 5e-82
Os05g0221200 Similar to 2o545-prov protein 258 1e-69
Os07g0548800 Protein of unknown function DUF538 family protein 76 1e-14
Os03g0692700 Similar to Pherophorin-S precursor 75 3e-14
Os01g0913100 Protein of unknown function DUF538 family protein 72 2e-13
Os11g0241832 67 5e-12
Os11g0241700 Protein of unknown function DUF538 family protein 67 5e-12
Os01g0595400 Protein of unknown function DUF538 family protein 65 2e-11
>Os03g0693400 Protein of unknown function DUF538 family protein
Length = 177
Score = 300 bits (767), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 33 HKNATLSEILPRYGLPPGLFPASVTAFSLAANGSLAVDLGGPCYAHYEYLTYFEPRVTGV 92
HKNATLSEILPRYGLPPGLFPASVTAFSLAANGSLAVDLGGPCYAHYEYLTYFEPRVTGV
Sbjct: 33 HKNATLSEILPRYGLPPGLFPASVTAFSLAANGSLAVDLGGPCYAHYEYLTYFEPRVTGV 92
Query: 93 LRYGSLTGLSGVKVRRFLVWFDVVRVKVDLPPPPRYVYLDIGWITRKLPADEFESPHECE 152
LRYGSLTGLSGVKVRRFLVWFDVVRVKVDLPPPPRYVYLDIGWITRKLPADEFESPHECE
Sbjct: 93 LRYGSLTGLSGVKVRRFLVWFDVVRVKVDLPPPPRYVYLDIGWITRKLPADEFESPHECE 152
Query: 153 DSKKCRLSSALATVAAWFQNFFAQF 177
DSKKCRLSSALATVAAWFQNFFAQF
Sbjct: 153 DSKKCRLSSALATVAAWFQNFFAQF 177
>Os05g0221200 Similar to 2o545-prov protein
Length = 195
Score = 258 bits (660), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 122/139 (87%), Positives = 130/139 (93%)
Query: 33 HKNATLSEILPRYGLPPGLFPASVTAFSLAANGSLAVDLGGPCYAHYEYLTYFEPRVTGV 92
HKNATLSEIL RYGLPPG+FP S+TAF+LAANGSLAVDL GPCY+HYEYLTYFE RV G+
Sbjct: 56 HKNATLSEILLRYGLPPGVFPTSITAFTLAANGSLAVDLQGPCYSHYEYLTYFEARVVGL 115
Query: 93 LRYGSLTGLSGVKVRRFLVWFDVVRVKVDLPPPPRYVYLDIGWITRKLPADEFESPHECE 152
LRYGSLT LSGVKVRRFLVWFDV+RVKVDLPPPP YVYLDIGWITRKLPADEFESPH+C+
Sbjct: 116 LRYGSLTDLSGVKVRRFLVWFDVIRVKVDLPPPPHYVYLDIGWITRKLPADEFESPHKCD 175
Query: 153 DSKKCRLSSALATVAAWFQ 171
DSKKCRLSSALAT A WFQ
Sbjct: 176 DSKKCRLSSALATAAVWFQ 194
>Os07g0548800 Protein of unknown function DUF538 family protein
Length = 202
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 37 TLSEILPRYGLPPGLFPASVTAFSL-AANGSLAVDLGGPCYAHYEY--LTYFEPRVTGVL 93
T+ E+L +GLP GL P V ++SL ANG L L PCYA Y+ L +F+ V G L
Sbjct: 44 TIHELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGNL 103
Query: 94 RYGSLTGLSGVKVRRFLVWFDVVRVKVDLPPPPRYVYLDIGWITRKLPADEFESPHECED 153
+G+L G+ G+ VW V + V P + DIG+ ++L FE P +C+
Sbjct: 104 SFGALRGVEGLSQEELFVWLPVKGIVV-ADPGSGVILFDIGYAHKRLSRSLFEEPPDCKP 162
Query: 154 SKKCRLSSALAT 165
S +A A
Sbjct: 163 SASAGTDAADAA 174
>Os03g0692700 Similar to Pherophorin-S precursor
Length = 174
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 39 SEILPRYGLPPGLFPASVTAFSLAAN-GSLAVDLGGPCYAHY-EYLTYFEPRVTGVLRYG 96
+++LP YGLP GL P ++ +++ + G + L CY + +L YFE + G + YG
Sbjct: 36 NDLLPEYGLPRGLIPETIASYTFDNDTGDFEIRLTSTCYIWFGSHLAYFEDAIRGRIAYG 95
Query: 97 SLTGLSGVKVRRFLVWFDVVRVKVDLPPPPRYVYLDIGWITRKLPADEFESPHECEDSKK 156
++TGLSG++ ++F VW + + P V G+I+ LP +F C +
Sbjct: 96 TITGLSGIQAQKFFVWVSITTIVAH--PDQGTVEFRAGFISEALPESDFAEVPVCGAGAR 153
Query: 157 CRLSSALA 164
R ++ LA
Sbjct: 154 LRGAAGLA 161
>Os01g0913100 Protein of unknown function DUF538 family protein
Length = 171
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 40 EILPRYGLPPGLFPASVTAFSL-AANGSLAVDLGGPCYAHYEYLTYFEPRVTGVLRYGSL 98
E+L +GLP GL PA + F +G LG C A +E + V GV+ YG +
Sbjct: 35 EVLRAHGLPRGLLPAGIADFRHDEGSGRFEAALGESCTAQFEVGLRYNATVAGVISYGRI 94
Query: 99 TGLSGVKVRRFLVWFDVVRVKVDLPPPPRYVYLDIGWITRKLPADEFESPHEC 151
LSGV + +WF V ++VD+ P +Y D+G + + P FE+P C
Sbjct: 95 ASLSGVSAQDLFLWFPVRGIRVDV-PSSGVIYFDVGVVFKHFPLAVFEAPPPC 146
>Os11g0241832
Length = 184
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 37 TLSEILPRYGLPPGLFPASVTAFSL-AANGSLAVDLGGPCYAHYE-YLTYFEPRVTGVLR 94
T+ E+L +YG PPG+ PA ++L A +GS V L G C + Y + + G +R
Sbjct: 71 TVYEMLGKYGFPPGILPAGAQGYTLDAGDGSFQVTLPGDCVVDVQGYKLRYRSNIYGNVR 130
Query: 95 YGSLTGLSGVKVRRFLVWFDVVRVKVDLPPPPRYVYLDIGWITRKLPADEFESPHECE 152
GS+ GL GV V+ +VW + V+ D V I++ PAD F++ C+
Sbjct: 131 AGSIDGLDGVSVKIAIVWVGIHDVEADGGD----VTFHASAISKSSPADGFQTSPSCQ 184
>Os11g0241700 Protein of unknown function DUF538 family protein
Length = 153
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 37 TLSEILPRYGLPPGLFPASVTAFSLAANGS-LAVDLGGPCY--AHYEYLTYFEPRVTGVL 93
T ++L R+G P G+ P V + L +GS V L G C A +Y+ ++ RV G +
Sbjct: 39 TAYDMLQRFGFPVGILPQGVQGYKLGDDGSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQI 98
Query: 94 RYGSLTGLSGVKVRRFLVWFDVVRVKVDLPPPPRYVYLDIGWITRKLPADEFESPHECE 152
GS+T L GVKV+ WF + V VD + L +G T + AD+ +C
Sbjct: 99 AAGSITSLEGVKVKEAFAWFRISEVDVD----GDQIKLHVGLYTATVAADQLAVSPQCN 153
>Os01g0595400 Protein of unknown function DUF538 family protein
Length = 160
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 35 NATLSEILPRYGLPPGLFPASVTAFSL-AANGSLAVDLGGPCYA---HYEYLTYFEPRVT 90
+ T + L G P GL PA+V ++L + +G AVDL C YL F R+T
Sbjct: 38 DVTAYDELRHRGFPLGLLPANVRGYTLDSGSGDFAVDLASSCRIVLPAGSYLASFSDRLT 97
Query: 91 GVLRYGSLTGLSGVKVRRFLVWFDVVRVKVDLPPPPRYVYLDIGWITRKLPADEFESPHE 150
G L ++GLSG++VR F W+ + ++ D + ++G ++ K PA F + E
Sbjct: 98 GRLDDRRISGLSGIRVRAFFRWWSITGIRAD----GDELVFEVGSVSAKFPARHFNASLE 153
Query: 151 C 151
C
Sbjct: 154 C 154
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.140 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,768,165
Number of extensions: 247326
Number of successful extensions: 527
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 524
Number of HSP's successfully gapped: 8
Length of query: 177
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 83
Effective length of database: 12,127,685
Effective search space: 1006597855
Effective search space used: 1006597855
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 152 (63.2 bits)