BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0615300 Os03g0615300|AK072294
(332 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0615300 Protein of unknown function DUF1618 domain con... 649 0.0
Os03g0597400 Protein of unknown function DUF1618 domain con... 399 e-111
Os12g0172400 Protein of unknown function DUF1618 domain con... 158 6e-39
Os12g0529100 Protein of unknown function DUF1618 domain con... 115 5e-26
AK105692 115 6e-26
Os01g0601950 95 9e-20
Os01g0175500 Protein of unknown function DUF1618 domain con... 89 4e-18
Os12g0587200 Protein of unknown function DUF1618 domain con... 83 3e-16
Os12g0589400 Conserved hypothetical protein 69 4e-12
>Os03g0615300 Protein of unknown function DUF1618 domain containing protein
Length = 332
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/312 (100%), Positives = 312/312 (100%)
Query: 21 NWVMLERFVFRRDDDKSFPDDTKATLRASGSGSHKTPFTIAFRIADPPAISRLYVQWPQG 80
NWVMLERFVFRRDDDKSFPDDTKATLRASGSGSHKTPFTIAFRIADPPAISRLYVQWPQG
Sbjct: 21 NWVMLERFVFRRDDDKSFPDDTKATLRASGSGSHKTPFTIAFRIADPPAISRLYVQWPQG 80
Query: 81 PNPEEMVACHLVATHRNLVLVCFCYIVECPVPACPQDYFIFTASGDDPVSSPLLKALPPC 140
PNPEEMVACHLVATHRNLVLVCFCYIVECPVPACPQDYFIFTASGDDPVSSPLLKALPPC
Sbjct: 81 PNPEEMVACHLVATHRNLVLVCFCYIVECPVPACPQDYFIFTASGDDPVSSPLLKALPPC 140
Query: 141 TYQPKGGEPLPCTYQPEGGFPPSDVEGDGNLRYPLEFRSVGILCQGEEFAVAELQVLRNI 200
TYQPKGGEPLPCTYQPEGGFPPSDVEGDGNLRYPLEFRSVGILCQGEEFAVAELQVLRNI
Sbjct: 141 TYQPKGGEPLPCTYQPEGGFPPSDVEGDGNLRYPLEFRSVGILCQGEEFAVAELQVLRNI 200
Query: 201 NANVKARLCVLRSAISSKGEDGDGGGRWDIMELPIVYGSGEEYWDIFYWTTDTVIAFQNY 260
NANVKARLCVLRSAISSKGEDGDGGGRWDIMELPIVYGSGEEYWDIFYWTTDTVIAFQNY
Sbjct: 201 NANVKARLCVLRSAISSKGEDGDGGGRWDIMELPIVYGSGEEYWDIFYWTTDTVIAFQNY 260
Query: 261 LCWVDYDRGMLFCDVLQKRPGIAFIRFPLDSFPNGRSRRHFSQVYRGVSVTPSATALAPS 320
LCWVDYDRGMLFCDVLQKRPGIAFIRFPLDSFPNGRSRRHFSQVYRGVSVTPSATALAPS
Sbjct: 261 LCWVDYDRGMLFCDVLQKRPGIAFIRFPLDSFPNGRSRRHFSQVYRGVSVTPSATALAPS 320
Query: 321 SLLMSTGSIASC 332
SLLMSTGSIASC
Sbjct: 321 SLLMSTGSIASC 332
>Os03g0597400 Protein of unknown function DUF1618 domain containing protein
Length = 453
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/322 (68%), Positives = 236/322 (73%), Gaps = 51/322 (15%)
Query: 21 NWVMLERFVFRRDDDKSFPDDTKAT-LRASGSGSHKTPFTIAFRIADPPAISRLYVQWPQ 79
NWVMLERFVFRRDDD T+AT LRASGSGSH TPFTIAFRIADPPAISRLYV+WPQ
Sbjct: 3 NWVMLERFVFRRDDD------TRATVLRASGSGSHGTPFTIAFRIADPPAISRLYVRWPQ 56
Query: 80 GPNPEEMVACHLVATHRNLVLVCFCYIVECPV-PACPQDYFIFTASGD-------DPVSS 131
GP+PEEMVAC LVATHRNLVLVCFCYIVE P PACPQDYFIFTASG PV S
Sbjct: 57 GPDPEEMVACPLVATHRNLVLVCFCYIVESPSGPACPQDYFIFTASGSGDGDVDHHPVPS 116
Query: 132 PLLKALPPCTYQPKGGEPLPCTYQPEGGFPPSDVEGDGN---LRYPLEFRSVGILCQGEE 188
PLLKALPPCTY EGDGN +RYPLEFRSVGILC+GEE
Sbjct: 117 PLLKALPPCTYHD---------------------EGDGNDLSMRYPLEFRSVGILCRGEE 155
Query: 189 FAVAELQVLRNINANVKARLCVLRSAISSKGEDGDGGGR---------WDIMELPIVYGS 239
FAVAELQVLR + VKARLCVLRSAISS ++ + WDIMELPIVY
Sbjct: 156 FAVAELQVLRTASGRVKARLCVLRSAISSSKDEDEAEDGDHGGGGRRPWDIMELPIVYDG 215
Query: 240 GEEYWDIFYWTTDTVIAFQNYLCWVDYDRGMLFCDVLQKRPGIAFIRFPLDS--FPNG-R 296
EE DIFYWTTD VIAFQ++LCWVDYDRGML CDVL+ P +AF+RFPLDS P G R
Sbjct: 216 DEERCDIFYWTTDAVIAFQDHLCWVDYDRGMLLCDVLRTSPRVAFLRFPLDSSIIPTGRR 275
Query: 297 SRRHFSQVYRGVSVTPSATALA 318
SRR+FSQVYRGVSVT +AT A
Sbjct: 276 SRRNFSQVYRGVSVTTAATGGA 297
>Os12g0172400 Protein of unknown function DUF1618 domain containing protein
Length = 437
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 149/298 (50%), Gaps = 67/298 (22%)
Query: 21 NWVMLERFVFRRDDDKSFPDDTKATLRASGSGSHKTPFTIAFRIADPPAISRLYVQWPQG 80
NWVMLERF+FR DDDK FPDD +RASG S + PF +AFR+++PP ISR+YVQ P
Sbjct: 9 NWVMLERFIFRVDDDKEFPDDV---IRASGLTSQENPFHVAFRLSNPPGISRIYVQLPGF 65
Query: 81 PNPEEMVACHLVATHRNLVLVCFCYIVECPVPACPQDYFIFTASGDDPVSSPLLKALPPC 140
PN ++ +VATHR+LVL V+ + QD I+ AS L+ LPPC
Sbjct: 66 PNSRNVLPFSVVATHRHLVLFSLISTVKDQIDV--QDLVIYDASAT-------LQTLPPC 116
Query: 141 TYQPKGGEPLPCTYQPEGGFPPSDVEGDGNLRYPLEFRSVGILCQGEEFAVAELQVLRNI 200
T E D L L+++
Sbjct: 117 T------------------------ELDNVL----------------------LRMIAAW 130
Query: 201 NANVKARLCVLRSAISSKGEDGDGGGRWDIMELPI-VYGSGEEYWDIFYWTTDTVIAFQN 259
V A+LC+LRS IS G W + LPI V+G+ ++ ++ W TDTVI F N
Sbjct: 131 PQVVLAQLCLLRSHISKVASSG-----WRTIRLPIHVHGNPDDVHQLYSWKTDTVIPFDN 185
Query: 260 YLCWVDYDRGMLFCDVLQKRPGIAFIRFPLDSFPNGRSRRHFSQVYRGVSVTPSATAL 317
LCW+DY RG+LF D ++F+ FP+D R++ F +YRGVSV ++ L
Sbjct: 186 QLCWIDYMRGILFYD--PAAIVVSFLPFPVDHETPRRNKECF-WLYRGVSVLDASGVL 240
>Os12g0529100 Protein of unknown function DUF1618 domain containing protein
Length = 475
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 139/285 (48%), Gaps = 51/285 (17%)
Query: 21 NWVMLERFVFRRDDDKSFPDDTKATLRASGSGSHKTPFTIAFRIADPPAISRLYVQWPQG 80
+WVML+ +VFR D FPDD A G S + F + PP S +++ W G
Sbjct: 5 DWVMLDPYVFR---DGPFPDDDPTA--AIGHNSRGDKVGVRFLLRAPPEPSSIFLDWEAG 59
Query: 81 PNPEEMVACHLVATHRNLVLVCFCYIVEC-PVPACPQ-DYFIFTASGDDPVSSPLLKALP 138
+ + +VA HR+ VL Y+V P A DY ++ A+G SSP L L
Sbjct: 60 TGDCDDFS--VVAAHRDAVLFQMGYLVSLGPSNAYKAFDYLLYRAAGAGG-SSPSLDLLA 116
Query: 139 PCTYQPKGGEPLPCTYQPEGGFPPSDVEGDGNLRYP------LEFRSVGILCQ-GEEFAV 191
P GG + +E DG +R L+ +G+LC+ GEEFAV
Sbjct: 117 PF-----GGSVDELKAR---------MEADGLIRLTNQHLRRLKCLDIGVLCRDGEEFAV 162
Query: 192 AELQVLRNINANVKARLCVLRSAISSKGEDGDGGGRWDIMELPIVYGSG-----EEY-WD 245
AELQ+ R + V L VLRS+ SS+ +W++ PI +G E++ WD
Sbjct: 163 AELQITR---SEVGPELHVLRSSTSSR--------KWELKRPPITPANGGSLDLEKFLWD 211
Query: 246 IFYWTTDTVIAFQNYLCWVDYDRGMLFCDVLQKRPGIAFIRFPLD 290
W DTVI F +YLCWVDY G+LFCD+ + P + ++ FP D
Sbjct: 212 ---WDADTVIPFGSYLCWVDYCLGILFCDMFDENPQLHYLEFPAD 253
>AK105692
Length = 475
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 139/285 (48%), Gaps = 51/285 (17%)
Query: 21 NWVMLERFVFRRDDDKSFPDDTKATLRASGSGSHKTPFTIAFRIADPPAISRLYVQWPQG 80
+WVML+ +VFR D FPDD A G S + F + PP S +++ W G
Sbjct: 5 DWVMLDPYVFR---DGPFPDDDPTA--AIGHNSRGDKVGVRFPLRAPPEPSSIFLDWEAG 59
Query: 81 PNPEEMVACHLVATHRNLVLVCFCYIVEC-PVPACPQ-DYFIFTASGDDPVSSPLLKALP 138
+ + +VA HR+ VL Y+V P A DY ++ A+G SSP L L
Sbjct: 60 TGDCDDFS--VVAAHRDAVLFQMGYLVSLGPSNAYKAFDYLLYRAAGAGG-SSPSLDLLA 116
Query: 139 PCTYQPKGGEPLPCTYQPEGGFPPSDVEGDGNLRYP------LEFRSVGILCQ-GEEFAV 191
P GG + +E DG +R L+ +G+LC+ GEEFAV
Sbjct: 117 PF-----GGSVDELKAR---------MEADGLIRLTNQHLRRLKCLDIGVLCRDGEEFAV 162
Query: 192 AELQVLRNINANVKARLCVLRSAISSKGEDGDGGGRWDIMELPIVYGSG-----EEY-WD 245
AELQ+ R + V L VLRS+ SS+ +W++ PI +G E++ WD
Sbjct: 163 AELQITR---SEVGPELHVLRSSTSSR--------KWELKRPPITPANGGSLDLEKFLWD 211
Query: 246 IFYWTTDTVIAFQNYLCWVDYDRGMLFCDVLQKRPGIAFIRFPLD 290
W DTVI F +YLCWVDY G+LFCD+ + P + ++ FP D
Sbjct: 212 ---WDADTVIPFGSYLCWVDYCLGILFCDMFDENPQLHYLEFPAD 253
>Os01g0601950
Length = 558
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 132/330 (40%), Gaps = 86/330 (26%)
Query: 22 WVMLERFVFRRDDDKSFPDDTKATLRASGSGSHKTPFTIAFRIADPPAISRLYVQWPQGP 81
WVML+ R D S D+ A A G+ S T+AF A PPAISRL
Sbjct: 33 WVMLDC----RVGDMSGDDNLGAITVAKGTTSTGDGITVAFSAAAPPAISRLLFALHPNK 88
Query: 82 NPEEMVAC-------------------HLVATHRNLVLVCFCYIVECP----VPACPQDY 118
N + + ++A H N VL+ + V P V + ++
Sbjct: 89 NRQTTDSDSDSDSSDSDSDESDSSARGRVIAAHGNSVLLSCIFNVRDPITPYVASLREEL 148
Query: 119 FIFTASGDDPVSSPLLKALPPCTYQPKGGEPLPCTYQPEGGFPPSDVEGDGNLRYPLEFR 178
FI+ P + L LPPC + + DG+ R
Sbjct: 149 FIY-----QPARAVDLTRLPPCYHGV--------------------INIDGS-------R 176
Query: 179 SVGILCQGE-EFAVAELQVLRNINAN---------VKARLCVLRSAISSKGEDGDGGGRW 228
++GILC+ EF VA L + ++ V A+LC GG W
Sbjct: 177 NIGILCRNNGEFVVAHLGGMTSVGDGGSGLPITRPVAAKLCKYV------------GGFW 224
Query: 229 DIMELPIVYGSGEEYWDIFYWTTDTVIAFQNYLCWVDYDRGMLFCDVLQKRPGIAFIRFP 288
L I + +GE+ D+ +W TD V+ F + LCWVDY RG+L CDV P ++R P
Sbjct: 225 STNWLRIHHAAGEDQ-DLCWWETDLVVPFGDSLCWVDYLRGILLCDVFSPIPDFRYVRLP 283
Query: 289 LDSFPNGRSR----RHFSQVYRGVSVTPSA 314
++ +P + R +YR V VT +
Sbjct: 284 VNPYPGSYDQELAMRGSMHMYRSVCVTKNG 313
>Os01g0175500 Protein of unknown function DUF1618 domain containing protein
Length = 478
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 126/282 (44%), Gaps = 60/282 (21%)
Query: 22 WVMLERFVFRRDDDKSFPDDTKATLRASGSGSHKTPFTIAFRIADPPAISRLYVQWPQGP 81
WV+L R RRD SF D ++ + SG + +++F +A PP S L + WPQGP
Sbjct: 72 WVILNRVGARRD---SFRGDRTTSVASRTSGGKE--ISVSFELAPPPETSLLTLDWPQGP 126
Query: 82 NPEEMVACH--LVATHRNLVLVCFCYIVECPVPACPQDYFIFTASGDDPVSSPLLKALPP 139
P E + ++A H N+VL+ +CP P DYF++ A P P L LP
Sbjct: 127 RPSEGTTSYPYVIAAHGNVVLLEIISTAKCPRP-IDIDYFVYKAK---PNGEPSLTRLPV 182
Query: 140 CTYQPKGGEPLPCTYQPEGGFPPSDVEGDGNLRYPLEFRSVGIL-CQGEEFAVAELQVLR 198
C ++ G P +P + ++G+L C + F VAE++ R
Sbjct: 183 CYWKGASGRDNP---RPR----------------IMSRVAMGVLSCSKDSFVVAEME--R 221
Query: 199 NINANVKARLCVLRSAISSKGEDGDGGGRWDI---MELPIVYGSGEEYWDIFYWTTDTVI 255
A + + S G DG W + + + + G+G +W+TD V+
Sbjct: 222 RSYQPSAANIYMFFS-----GSDG-----WRVFRDVRIDHINGAG-------WWSTDAVL 264
Query: 256 AFQN-YLCWVDYDRGMLFCDVLQ------KRPGIAFIRFPLD 290
+++ YL WVDY RGM+ + + P + ++ P+D
Sbjct: 265 SYRRRYLIWVDYLRGMIVAKLAHPGGGDPQEPALWYVPLPVD 306
>Os12g0587200 Protein of unknown function DUF1618 domain containing protein
Length = 507
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 133/305 (43%), Gaps = 49/305 (16%)
Query: 21 NWVMLERFV---FRRDDDKSFPDDTKATLRASGSGSHKTPFTIAFRIADPPAISRLYV-- 75
+W++L+ +V +RR D T + + + +G P + R+ADPPA+SRLY+
Sbjct: 15 DWIVLDPYVRCSWRRRHKYEEEDITASKVGRTCTG---FPVRASLRVADPPAVSRLYLHC 71
Query: 76 --QWPQGPNPEEMVACHLVATHRNLVLVCFCYIVECPVPAC----PQDYFIFTASGDDPV 129
QWP + E+ ++A HR +L E P P DYFI++AS P
Sbjct: 72 PPQWPA--DLPEVRYPDVIAAHRGCILFVAAVPFEEPGFNVDGHYPLDYFIYSAS---PS 126
Query: 130 SSPLLKALPPCTYQPKGGEPLPCTYQPEGGFPPSDVEGDGNLRYPLEFRSVGILCQGEEF 189
S PLL LPPC + YQP RY + R VG+LC+ +
Sbjct: 127 SQPLLTRLPPCFVGGFTDQEEDELYQP---------YHQQRQRY-MCSRDVGLLCRDGDG 176
Query: 190 AVAELQVLRNI-----NANVKARLCVLRSAISSKGEDGDGGGRWDIMELPIVYGSGEEYW 244
+ + L + + + + LCV++S GE W I L +
Sbjct: 177 DGEDGRSLFTVAHLTSSGSKEVELCVVQS-----GE----AEEWSITPLRVRRAMSMLGL 227
Query: 245 DIFYWTTDTVIAFQN-YLCWVDYDRGMLFCDVLQKRPG---IAFIRFPLDSFPNGRSRRH 300
++ W TD V+ + +LCWVDY +G+L DVL PG F PL S R
Sbjct: 228 NLGEWRTDAVLPLHDRFLCWVDYYQGILLIDVLN--PGDEPHQFSFIPLPKPVRDGSTRL 285
Query: 301 FSQVY 305
FSQ Y
Sbjct: 286 FSQSY 290
>Os12g0589400 Conserved hypothetical protein
Length = 477
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 108/247 (43%), Gaps = 28/247 (11%)
Query: 57 PFTIAFRIADPPAISRLYVQWPQGPNPEEMVACHLVATHRNLVL----VCFCYIVECPVP 112
P ++ R+ADPPA+SRLYV P P ++ +A HR +L V F +
Sbjct: 42 PIRVSLRVADPPAVSRLYVHRPGWPRVYDLGDAEAIAAHRGSILLSARVPFADLGTVAPG 101
Query: 113 ACPQDYFIFTASGDDPVSSPLLKALPPCTYQPKGGEPLPCTYQPEGGFPPSDVEGDGNLR 172
P DY+++TA + + P L LPPC GG P + + F P + R
Sbjct: 102 QFPVDYYVYTAG--EGLRRPSLTRLPPCFI---GGFSSP---EVDRHFKPHRCQQQ---R 150
Query: 173 YPLEFRSVGILCQGE-EFAVAELQVLRNINANVKARLCVLRSAISSKGEDGDGGGRWDIM 231
+E ++VG C G F VA++ NI+ LCVL + D +W +
Sbjct: 151 VMVE-QNVGFFCHGAGNFTVADI----NIHKGKAVELCVL-----NHYADCPQQPQWKVQ 200
Query: 232 ELPIVYGSGEEYWDIFYWTTDTVIAFQNYLCWVDYDRGMLFCDVLQKRPGIAFIRFPLDS 291
L + + + +WT + +YL VD G++ DV +R +I P ++
Sbjct: 201 ILEMQQQPNQNHHLRGWWTDAVLPLHDSYLACVDCYHGIILIDVKTQR-YFNYIPLPAEA 259
Query: 292 FPNGRSR 298
+GR R
Sbjct: 260 -KHGRRR 265
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.140 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,137,078
Number of extensions: 668446
Number of successful extensions: 1734
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1721
Number of HSP's successfully gapped: 12
Length of query: 332
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 231
Effective length of database: 11,762,187
Effective search space: 2717065197
Effective search space used: 2717065197
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)