Os01g0175500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1618 domain containing protein.
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Os01g0175500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1618 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.05 | 0.301 | 8.02 | 1.6 | 1.09 | -0.896 | 0.351 | 2.7 | 0.288 | 0.0445 | 24.6 | 10 | -- | -- |
| 43.79 | 0.311 | 8.05 | 1.26 | 1.12 | -0.677 | 0.000151 | -- | 0.209 | 0.145 | 23.78 | 8 | -- | -- |
| 41.37 | 0.302 | 8.03 | 1.52 | 1.09 | -0.886 | -- | 2.26 | 0.267 | 0.078 | 24.6 | 10 | -- | -- |
| 43.77 | 0.31 | 8.05 | 1.26 | 1.12 | -0.666 | -- | -- | 0.209 | 0.144 | 23.8 | 12 | -- | -- |
| 97.85 | 0.463 | 7.96 | 1.85 | -- | -1.83 | -- | 3.63 | 0.423 | -- | 24.37 | 8 | -- | -- |
| 50.73 | 0.334 | 8.07 | 1.15 | 1.34 | -- | 0.0694 | -- | 0.124 | 0.626 | -- | -- | -- | -- |
| 50.75 | 0.334 | 8.07 | 1.15 | 1.34 | -- | -- | -- | 0.123 | 0.631 | -- | -- | -- | -- |
| 104.01 | 0.477 | 8.01 | 1.43 | -- | -1.53 | -- | -- | 0.328 | -- | 23.8 | 12 | -- | -- |
| 83.39 | 0.428 | 8.1 | -- | 1.24 | -0.36 | -- | -- | 0.0211 | 0.44 | 24.85 | 17 | -- | -- |
| 162.8 | 0.596 | 8.05 | 1.19 | -- | -- | -- | -- | 0.147 | -- | -- | -- | -- | -- |
| 85.46 | 0.432 | 8.1 | -- | 1.35 | -- | -- | -- | -0.00442 | 0.671 | -- | -- | -- | -- |
| 155.85 | 0.583 | 8.06 | -- | -- | -1.35 | -- | -- | 0.116 | -- | 24.5 | 3 | -- | -- |
| 200.46 | 0.661 | 8.08 | -- | -- | -- | -- | -- | 0.0142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 12 |
| 2 | 39.65 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 18 |
| 5 | 39.72 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 20 |
| 7 | 39.74 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 16 |
| 8 | 39.75 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 14 |
| 15 | 40.00 | temperature | 20 | 90 | > th | dose dependent | rect. | 5 | 11 |
| 16 | 40.01 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 11 |
| 29 | 40.19 | temperature | 25 | 10 | > th | dose dependent | sin | 1 | NA |
| 32 | 40.22 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 18 |
| 37 | 40.30 | temperature | 10 | 10 | > th | dose dependent | sin | 0 | NA |
| 71 | 40.62 | temperature | 25 | 10 | > th | dose dependent | rect. | 18 | 23 |
| 79 | 40.70 | temperature | 25 | 10 | > th | dose dependent | rect. | 20 | 23 |
| 111 | 40.92 | temperature | 25 | 10 | > th | dose independent | rect. | 5 | 12 |
| 137 | 41.04 | temperature | 25 | 270 | > th | dose independent | rect. | 5 | 10 |
| 138 | 41.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 161 | 41.18 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 162 | 41.18 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 21 |
| 167 | 41.19 | temperature | 30 | 10 | < th | dose dependent | sin | 0 | NA |
| 175 | 41.21 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 194 | 41.26 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 195 | 41.27 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 197 | 41.27 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 308 | 41.52 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 17 |
| 312 | 41.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 323 | 41.57 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 20 |
| 342 | 41.65 | temperature | 25 | 90 | > th | dose independent | sin | 0 | NA |
| 460 | 41.91 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 4 |
| 464 | 41.91 | temperature | 30 | 30 | < th | dose dependent | rect. | 24 | 23 |
| 527 | 42.03 | temperature | 25 | 90 | < th | dose independent | sin | 1 | NA |
| 637 | 42.28 | temperature | 25 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 690 | 42.40 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 11 |
| 705 | 42.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 13 |
| 721 | 42.47 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 15 |
| 736 | 42.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 5 |
| 825 | 42.71 | temperature | 25 | 10 | < th | dose independent | rect. | 5 | 15 |
| 840 | 42.73 | temperature | 25 | 90 | < th | dose independent | rect. | 7 | 13 |