Os12g0587200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1618 domain containing protein.
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Os12g0587200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1618 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.21 | 0.267 | 10.1 | 0.266 | 0.909 | 0.498 | -0.722 | -1.33 | 0.427 | 15.5 | 23.3 | 841 | -- | -- |
| 32.98 | 0.267 | 10.1 | 0.136 | 0.903 | 1.02 | -0.846 | -- | 0.379 | 15.5 | 20.19 | 831 | -- | -- |
| 33.71 | 0.27 | 10.1 | 0.285 | 0.895 | 0.521 | -- | -1.39 | 0.437 | 15.5 | 23.39 | 916 | -- | -- |
| 35.14 | 0.276 | 10.1 | 0.111 | 0.889 | 1.02 | -- | -- | 0.369 | 15.6 | 20.31 | 854 | -- | -- |
| 76.9 | 0.408 | 10 | 0.456 | -- | 0.749 | -- | -1.82 | 0.518 | -- | 26.61 | 1041 | -- | -- |
| 40.63 | 0.299 | 10.1 | -0.0978 | 0.935 | -- | -0.923 | -- | 0.28 | 15.2 | -- | -- | -- | -- |
| 43.37 | 0.308 | 10.1 | -0.116 | 0.932 | -- | -- | -- | 0.274 | 15.3 | -- | -- | -- | -- |
| 78.05 | 0.411 | 10.1 | 0.151 | -- | 1.34 | -- | -- | 0.378 | -- | 20.34 | 956 | -- | -- |
| 35.42 | 0.277 | 10.1 | -- | 0.89 | 0.956 | -- | -- | 0.351 | 15.5 | 20.28 | 853 | -- | -- |
| 92.47 | 0.449 | 10.1 | -0.156 | -- | -- | -- | -- | 0.25 | -- | -- | -- | -- | -- |
| 43.72 | 0.309 | 10.1 | -- | 0.934 | -- | -- | -- | 0.287 | 15.3 | -- | -- | -- | -- |
| 78.56 | 0.413 | 10.1 | -- | -- | 1.25 | -- | -- | 0.353 | -- | 20.3 | 953 | -- | -- |
| 93.11 | 0.45 | 10.1 | -- | -- | -- | -- | -- | 0.267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.25 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 2 | 28.27 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 4 |
| 4 | 28.30 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 5 | 28.41 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 12 |
| 6 | 28.45 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 4 |
| 7 | 28.51 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 5 |
| 24 | 28.71 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 11 |
| 62 | 29.11 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 82 | 29.23 | temperature | 25 | 720 | < th | dose dependent | sin | 6 | NA |
| 110 | 29.37 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 15 |
| 112 | 29.39 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 13 |
| 124 | 29.46 | temperature | 20 | 720 | < th | dose independent | rect. | 2 | 11 |
| 129 | 29.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 11 |
| 130 | 29.48 | temperature | 20 | 720 | < th | dose independent | sin | 6 | NA |
| 153 | 29.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 156 | 29.55 | temperature | 20 | 720 | > th | dose independent | sin | 6 | NA |
| 157 | 29.55 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 173 | 29.59 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 4 |
| 206 | 29.69 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 14 |
| 290 | 29.93 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 18 |
| 309 | 30.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 781 | 31.00 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 8 |