Os03g0597400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1618 domain containing protein.
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Os03g0597400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1618 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.35 | 0.513 | 9.05 | -0.285 | 0.905 | -0.956 | 0.243 | -0.489 | -0.72 | 11.9 | 28.9 | 4811 | -- | -- |
| 119.47 | 0.509 | 9.06 | -0.323 | 0.905 | -0.994 | 0.218 | -- | -0.726 | 11.9 | 28.7 | 4794 | -- | -- |
| 119.45 | 0.509 | 9.05 | -0.284 | 0.897 | -0.951 | -- | -0.44 | -0.733 | 11.9 | 28.8 | 4784 | -- | -- |
| 119.47 | 0.509 | 9.07 | -0.396 | 0.887 | -0.989 | -- | -- | -0.75 | 11.8 | 28.7 | 4778 | -- | -- |
| 156.56 | 0.586 | 9.09 | -0.384 | -- | -0.801 | -- | 0.596 | -0.761 | -- | 28.4 | 5998 | -- | -- |
| 155.33 | 0.584 | 9.05 | -0.103 | 0.857 | -- | 0.144 | -- | -0.692 | 12.1 | -- | -- | -- | -- |
| 155.42 | 0.584 | 9.05 | -0.0978 | 0.857 | -- | -- | -- | -0.691 | 12.1 | -- | -- | -- | -- |
| 157.17 | 0.586 | 9.08 | -0.294 | -- | -0.77 | -- | -- | -0.739 | -- | 28.4 | 5998 | -- | -- |
| 123.5 | 0.518 | 9.06 | -- | 0.919 | -0.957 | -- | -- | -0.713 | 11.9 | 28.7 | 4794 | -- | -- |
| 201.63 | 0.664 | 9.07 | -0.125 | -- | -- | -- | -- | -0.704 | -- | -- | -- | -- | -- |
| 155.67 | 0.584 | 9.05 | -- | 0.858 | -- | -- | -- | -0.68 | 12.1 | -- | -- | -- | -- |
| 156.57 | 0.585 | 9.07 | -- | -- | -0.751 | -- | -- | -0.695 | -- | 27.9 | 4683 | -- | -- |
| 202.04 | 0.663 | 9.07 | -- | -- | -- | -- | -- | -0.69 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.80 | humidity | 70 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 8 | 115.64 | humidity | 80 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 24 | 116.01 | humidity | 90 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 31 | 116.11 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 34 | 116.12 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 10 |
| 41 | 116.21 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 68 | 116.36 | humidity | 80 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 72 | 116.40 | humidity | 80 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 75 | 116.40 | humidity | 70 | 14400 | > th | dose dependent | rect. | 9 | 13 |
| 114 | 116.62 | humidity | 80 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 117 | 116.63 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 13 |
| 130 | 116.68 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 13 |
| 134 | 116.70 | humidity | 70 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 144 | 116.76 | humidity | 60 | 14400 | > th | dose dependent | sin | 19 | NA |
| 153 | 116.79 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 8 |
| 163 | 116.83 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 205 | 116.97 | humidity | 80 | 14400 | > th | dose independent | rect. | 11 | 10 |
| 220 | 117.03 | humidity | 80 | 14400 | < th | dose independent | rect. | 11 | 10 |
| 316 | 117.32 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 402 | 117.57 | humidity | 80 | 14400 | < th | dose independent | sin | 21 | NA |
| 448 | 117.71 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 464 | 117.75 | humidity | 80 | 14400 | > th | dose independent | sin | 21 | NA |
| 519 | 117.90 | humidity | 70 | 14400 | > th | dose independent | rect. | 13 | 17 |
| 538 | 117.93 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 4 |
| 600 | 118.06 | humidity | 90 | 14400 | < th | dose dependent | sin | 18 | NA |
| 711 | 118.32 | temperature | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 756 | 118.40 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 940 | 118.75 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 946 | 118.76 | humidity | 70 | 14400 | > th | dose independent | sin | 17 | NA |
| 965 | 118.80 | humidity | 60 | 14400 | > th | dose dependent | no | NA | NA |