Os12g0529100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1618 domain containing protein.
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Os12g0529100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1618 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.98 | 0.467 | 3.22 | 0.753 | 0.305 | 0.647 | 0.832 | 2.51 | 0.0834 | 20.3 | 997.6 | 9249 | -- | -- |
| 101.94 | 0.47 | 3.23 | 0.69 | 0.298 | 1 | 0.889 | -- | 0.108 | 20.3 | 998.5 | 9606 | -- | -- |
| 101.13 | 0.468 | 3.22 | 0.727 | 0.304 | 0.655 | -- | 2.49 | 0.0843 | 20.3 | 997.6 | 9249 | -- | -- |
| 104.02 | 0.475 | 3.24 | 0.634 | 0.307 | 1.03 | -- | -- | 0.105 | 20.3 | 998.3 | 9613 | -- | -- |
| 106.25 | 0.48 | 3.21 | 0.729 | -- | 0.644 | -- | 2.53 | 0.0818 | -- | 997.7 | 9251 | -- | -- |
| 119.9 | 0.513 | 3.25 | 0.809 | 0.312 | -- | 0.87 | -- | 0.0245 | 20.1 | -- | -- | -- | -- |
| 122.17 | 0.518 | 3.25 | 0.785 | 0.311 | -- | -- | -- | 0.0252 | 20.1 | -- | -- | -- | -- |
| 109.25 | 0.487 | 3.23 | 0.63 | -- | 1.03 | -- | -- | 0.1 | -- | 998.4 | 9613 | -- | -- |
| 114.26 | 0.498 | 3.25 | -- | 0.302 | 1.16 | -- | -- | 0.0427 | 20.4 | 998.4 | 9686 | -- | -- |
| 127.47 | 0.528 | 3.25 | 0.782 | -- | -- | -- | -- | 0.0213 | -- | -- | -- | -- | -- |
| 138.39 | 0.55 | 3.27 | -- | 0.307 | -- | -- | -- | -0.0622 | 20.3 | -- | -- | -- | -- |
| 119.42 | 0.509 | 3.24 | -- | -- | 1.15 | -- | -- | 0.0433 | -- | 998.4 | 9692 | -- | -- |
| 143.59 | 0.559 | 3.27 | -- | -- | -- | -- | -- | -0.0654 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.18 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 7 | 3 |
| 2 | 89.22 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 3 | 89.27 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 3 | 8 |
| 5 | 89.30 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 10 | 89.34 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 12 | 89.35 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 3 | 8 |
| 15 | 89.39 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 7 | 3 |
| 40 | 89.78 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 46 | 89.83 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 5 | 5 |
| 51 | 89.89 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 274 | 94.88 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 289 | 95.32 | atmosphere | 1000.0 | 1440 | < th | dose independent | sin | 7 | NA |
| 308 | 96.05 | atmosphere | 1000.0 | 1440 | > th | dose independent | sin | 7 | NA |
| 312 | 96.31 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 17 | 1 |
| 331 | 97.10 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 338 | 97.48 | atmosphere | 1000.0 | 1440 | < th | dose dependent | sin | 8 | NA |
| 359 | 98.65 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 362 | 98.72 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 366 | 98.81 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 402 | 99.27 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 407 | 99.41 | atmosphere | 1000.0 | 720 | < th | dose dependent | rect. | 6 | 9 |
| 409 | 99.44 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 411 | 99.48 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 438 | 99.73 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 439 | 99.74 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 460 | 99.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 481 | 100.10 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 513 | 100.48 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 517 | 100.52 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 530 | 100.60 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 545 | 100.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 547 | 100.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 549 | 100.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 569 | 100.89 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 573 | 100.92 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 576 | 100.94 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 577 | 100.96 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 15 | 3 |
| 684 | 101.67 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 6 | 12 |
| 701 | 101.79 | wind | 7.0 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 711 | 101.84 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 9 | 9 |
| 719 | 101.88 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 811 | 102.31 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 10 | 11 |
| 824 | 102.33 | atmosphere | 1000.0 | 720 | < th | dose dependent | sin | 3 | NA |
| 840 | 102.37 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 846 | 102.40 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 848 | 102.40 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 882 | 102.47 | atmosphere | 1000.0 | 4320 | < th | dose independent | sin | 0 | NA |
| 892 | 102.48 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 18 | 20 |
| 922 | 102.55 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 10 | 11 |
| 947 | 102.59 | atmosphere | 1000.0 | 4320 | > th | dose independent | sin | 1 | NA |
| 990 | 102.64 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 18 | 20 |